Basic Information

Insect: Ochropleura leucogaster
Gene Symbol: clz9
Assembly: GCA_958449745.1
Location: OY288222.1:14073104-14075677[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.6e-08 4.8e-05 23.7 0.0 2 37 8 43 7 47 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.6e-08	4.8e-05	23.7	0.0	2	37	8	43	7	47	0.89

Sequence Information

Coding Sequence: atgactgaaagaaaATACAAGCAAGAGGACCTTTTAAAAGCCATAGAAGCTATACATCAAGGGGCCACAACATCAGATGCAGCAAGAAAATTTAAAGTGCCAAGGACCACATTAAATGACAAGATTAAAGGGCGTAGTCTAGTCGGCTGCTCTAAAGGACCAACTACTGTTTTAACTCCAGAAGAAGAAGAACATTTAAAGAATTGGTTAATCTTTATGGCAGAAAGTGGTTTTCCTGTAACATCAGATCAGTTATTAGATAGCGTCAAATTATTAGTTACCAAATTCAAACGTAGTAACCCATTTACTAACAATAGACCAGGTCGACATTGGTTCGAGTCATTCATAAAGCGTCACCCTGAAGTGGGTCGGAGGGTGTCCCAAAATTTAACACAATCTCGAGCATTAGTCACGGAAGGTGATGTTCGTACCTGGTTCAAAGAAGTTCAGGATTATTTTAGTACTGCTCAGCTACAGGCAACTTCTGAAGACCCGCGGAGAATTTTTAACTGCGATGAGAGCGCCTTTTTCTTGTCCCCCGCTGACAACCGAGTCTTAGCGAAACGTGGGTCtaaaaatgtttacaatatAATACCAAGTGGAGAAAAAGAGTGCGTAACAGTTCTCCTAACAGCTAATGCATCAGGTGAATTGGCACCGCCGATGGTTCTTTTTAAGCTCAAGTCAATCCCTCACAAAATTTCGACTTCAGCACCCAATGATTGGGGATTAGGGCACACAAATAGAGGCTGGATGACTGGCGAAGCTTTCTATGAATATATAGCAAATGTGTTCTACCCTTGGGTTATAAGAAGTGGCATCCAGTTGccgataatattttatttggatgGCCACTGCTCTCATACGACGCTACCATTGAGCAATTTCTGTAGAGAAAATCAAATTATACTCATCGCGCTCTATCCAAATGCTACACATATTCTTCAACCCATGGATGTAGCAGTATTTAGGCCTCTCAAAAGAATATGGAAACAATCTGTATATGATTGGCGCAATGAGAATcactttgtaaaattaaaaaaggaaaatttctGTCCCTTGTTAGACAAGACTCTCAAACAATTAAACAGAAATTCTATTGTAAATGGATTTCGTAAATGTGGGCTGTCACCATTTGACGCTAATAACGTTGATTATACTAAATGTGTCACCAAAAAGTTAAGCCAGTCCACCCAGAAAACCAAAACAGCTGATAAAGTTTCCTTGTCCGACAAACATAATCACATAAAATTTTTTGAATCTCAGATCAGCCCCAGGACACTTAAAACTTTCCATGATAATAGAATGTCTACATGGAATGGTGAAAAATCGTTAGAGGGATTGTTCACTGTCTGGAAGTCTATGGTTACTCAATTTTCCACTAGTTCTGAAGACGACTGTGATAAGGAGAATACAGATATCGAAAACGCAAATGTGCAAAAAACCTTTCCTATTAGTAATAGAGTTGAAGATGATTTTAGTAATTATACGATTGGCGATTTTAGATTAAGTGAAATAATGGACTATTCGTTAAACGATGTTTCCGAATTTgatttcacaaataaatcaGAAACTGAAGGAAAGGTAGAATTTTTTGAAGTTGTTAATGGAACGCTTAACCAAATAAATCCTCAAACATCTGTCACAAAGAATACAGAAATGCCAGTATTTTTAGAGCAGACGCCAAATTTTGAATTACACCAAACAGCACCTCCAGTCGTCCCAATATGGGATATAATTCGGACAACAGGTTCAAACCCTATTTATTTAAAGCCTCGCAATACAATTAAAACTAATGTAACATCGACGGTAACATCCACTTCCATATCAAGCACTTTTTCTGGAATTTCGGAAACCACTCCTCCACATGACGACACAAATTTTACACCAACCATGTCGCAAATACAACCTCGAACTATTTATTTGACGCCTCGCAGACAATTATCGCCTATTCCATGTCACAAAATCACATTTCCTGCACCTTCCATAAAAAAACCAAAAGTGACATCGACAGTAACATCATATTCCATGCCGGATACTGTTGCGGGACATATGAATAACACAACACAACACGATGGAACAGATTGCAATTTAACCGAGTCACAGCCACAGCCAGCTGCTAAGATGTGCTATGATAATCTTACGATACCAACGCCTTttaaagatgttttattttggcCACCACCTCAACACCAGACCCCACAGAccataccaaaaataaaaaagcccaGTGTTATAACCTCAGACCGGTGGCAAATCTTCGAACAACGAAAGATCGATGCCAAGACCGAAAAGGAAGAGATAAAGAAGAAAAGAGTCGAAGCAAGAAAAATTGGGAAAGCTAAAAGAGCGCAGACGGCAGGAAGCAATAAAGCGAAAAAAGAAAGCAATAAAACAAGCATTTCGGTGCAAGAAGCCAAAAACGAAGATTGGTTCTGTCGATTGTGTCAAACAAGTGCAGAAATGGATATGATACAATGTCTTAGTTGTTCAATCTGGTACCATACAACTTGTGCAGAAATAGATCCAACAGAGAAAATATTTCATTGTGTCTATTGCACCGCccagacataa
Protein Sequence: MTERKYKQEDLLKAIEAIHQGATTSDAARKFKVPRTTLNDKIKGRSLVGCSKGPTTVLTPEEEEHLKNWLIFMAESGFPVTSDQLLDSVKLLVTKFKRSNPFTNNRPGRHWFESFIKRHPEVGRRVSQNLTQSRALVTEGDVRTWFKEVQDYFSTAQLQATSEDPRRIFNCDESAFFLSPADNRVLAKRGSKNVYNIIPSGEKECVTVLLTANASGELAPPMVLFKLKSIPHKISTSAPNDWGLGHTNRGWMTGEAFYEYIANVFYPWVIRSGIQLPIIFYLDGHCSHTTLPLSNFCRENQIILIALYPNATHILQPMDVAVFRPLKRIWKQSVYDWRNENHFVKLKKENFCPLLDKTLKQLNRNSIVNGFRKCGLSPFDANNVDYTKCVTKKLSQSTQKTKTADKVSLSDKHNHIKFFESQISPRTLKTFHDNRMSTWNGEKSLEGLFTVWKSMVTQFSTSSEDDCDKENTDIENANVQKTFPISNRVEDDFSNYTIGDFRLSEIMDYSLNDVSEFDFTNKSETEGKVEFFEVVNGTLNQINPQTSVTKNTEMPVFLEQTPNFELHQTAPPVVPIWDIIRTTGSNPIYLKPRNTIKTNVTSTVTSTSISSTFSGISETTPPHDDTNFTPTMSQIQPRTIYLTPRRQLSPIPCHKITFPAPSIKKPKVTSTVTSYSMPDTVAGHMNNTTQHDGTDCNLTESQPQPAAKMCYDNLTIPTPFKDVLFWPPPQHQTPQTIPKIKKPSVITSDRWQIFEQRKIDAKTEKEEIKKKRVEARKIGKAKRAQTAGSNKAKKESNKTSISVQEAKNEDWFCRLCQTSAEMDMIQCLSCSIWYHTTCAEIDPTEKIFHCVYCTAQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00039745;
90% Identity: iTF_01084199;
80% Identity: -