Odup018475.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ochropacha duplaris
Gene Symbol
clz9
Assembly
GCA_951361185.1
Location
OX592710.1:4707433-4712411[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-09 7.2e-07 29.4 0.0 3 36 13 46 11 50 0.94

Sequence Information

Coding Sequence
ATGGAGCCACAAAAGCGGCGAAAAGTATATAGTAAAACACAACTCGCCGAAGCAATCAAAGCAATTAATGACGGTACGAGTGTATATGAGGCATCAAAAAGGTTTAATATTCCCAAAACTACATTACGAGACAAACGGGACGGGAAATATAAGAATGAAATTTGCGGAGTTCAGCCGGTTCTTAATTTAAGTGAAGAAAAACAGATAGTAGACTGGATTCACTACCTTGGCAAGATGGGATTTCCAGTTACAAAAGAACAATTATTAGAAGCAGTGGCTAAGCTAGTCCAAAACCTAAATCGTCCAAACCCTTTTAAAAATGGTGTGCCTGGCAGATATTGGTTTGAGAATTTTATAAAGAGACATCCAACAGTATCTAAACGTGTTGCACAAAATCTTCCTTCAAGTCGAAATCAAGTCACAGAAGCGGCTATACGTGCATGGTTCGACAGagtgaacaattattttatgaCAAATAATCTGCATCATGTTTTAGAAGATCCTAGACGAGTGTTTAACTGTGACGAAACTGCTTTCTTTTTATGCCCAAAAGAGAAAGAAGTTTTGGTCAGCAGAGGTAGCAAACGAGTGTATAATCGTGTTGCTAATGACGAAAAAGAGTGCTTGACTGTGCTTGTGAACGTTTCAGCTGACGGAAATCTAGCACCTCCAATGATACTTTTTCCGTATAAACGTTTACCAAAAAATCTTGTGCCTACATTACCTCGTGGATGGGGACTTGGTAACACGGAATCGGGTTGGATGAACACAGAAGCATTTTATGAATATGTTACCAACTGCTTCTATCCGTGGCTTATAACAAATGAAATACCATTTCCAGTAGTTTTGTTTTTGGATGGTCACACATCTCACATATCACTTCCACTATCAACATTCTGTAAAGAAAAAGCAATCATCCTGGTAGCTTTACTTCCCAATTCTACACATATACTACAGCCGCTTGACGTAGCTGTTTTCAGACCAGTCAAAGGAACATGGAGGACTGTTGTGCATGAATTCAGAATTCAAAATAACTATGCCAAGCTTAAACGCACTGATTTTGCTCCGgcagtaaaaaaatgttttgaccAATGCCTTAAGCCTGAAACCATACAGAGCGGATTTCGATGTTGTGGATTATATCCATTTGATCCATCTAAAATAAACTACAGTAAACTGTTgccaaatttaaaatatactgaagacatCAATCATATAACCACATTTGAATATGCAGAAAAATTTAAACGTGATTTCGAGGCTAGATTGTCACCTATaaccttacaaactttcaaagATTCGGGAGGCCAATGGATGGGAGATCCAacttataaaaagttatttgaatATTGGAAGAAAATTACCCCCGAAAACGCCATAAATCAAGAGAGTGGAAGTATTCTGCAGTTAGGGGAATCAACACTAAATAACAATTTTGTGAATGAAACGCCAGATATATCTGAGGCTATCCTAAATTTTGATATAGTTGCTGAGAGTAACCTAATACTGCCAATAGAGCAAGGTTCAGAAGTATTGGGAGAAGAGGCATCCAACTTATCCTTGTTTATTGAAAAACCTCTACCCTCGTCGCCTACTGTAAACTTTTTAATTGTACAAGATGAGTTCAACCAGTTTCTGCAGACATCTACTCCTCAACAAGATAATATACTTCTACCATCTACCAACGAGTTAACACCCTTGTCCACTTCGATTCTTGCACcagaaaataatactttaattgAAATAACCGCGGAGCCGCTACAAACACTTCAGAAGTATACACCATCACCCAAAAATGCAACCAACGAGACCGCTCCAAAAACAAGTGGTAGCTCTGCTATTCCCACACCATTTAAGAATTATGCGACACCTTTCAAAAATGCTCTTTACTTTCCGAAGAAtaatatcgattacaataaaaagaagacattaaataaaaaactcacGCCGACAGTAGCTATATCTGATGAGTTTATGGAATATCAAAGGagaattataaaagaaaaagaagacaaagaaaataaaaaaataaaaagaaaacaagaaaTCTTGGAAAAAAGGGAACAAAAAGAATTATTGAAGAAAACAACAACCTTAAAGAAGaaaaaacctattaaaaaaGTGAATGCGGTTAACAAAGAAGATTCTCCTGTAGCAGGCCCTAGTAAATATCAATCAGATAGCGAATTCGATTTTAATTTACTTCCAAAGGAAGCAGCAAAGCGTCGCGTGCTTTGTAACAGTGAGTTAGAAAATGAATCTAATAAAGGACATGAACATTCTAATGGTACTTTAATTAATGATAGAGATTCTTTTGAAACAGAAACTACCGTACGTCTATTAGAGTCCGACTCTGCAAGAGAGACAGTTAAACGTCGAGTCTTATATAGCACCGATTATGAATTGTCTACAAGTGAGGTAGAGCCAGGCCTCACTAAGTTAAGTTGTTTCCTCGACTTAGAAGCCGATAGAAATGCACGACACGCGAAACCGGAACTCACTGCCCTTCCGGTGCGTAGCAGCCAACCTGCAGCCACTAAGCGTTCGCATCCACGTAGCTTTGCTACGGCGGGGACAAGTGAAAACGCACGCTCGGGTCAGTGCGATAGAGTACGCGCTACGGAAAGGCAAGATGGCGCCACACGGCACAAACCCCAAACGAAGGCTTTGGCAACCTCCTCTAAGGAGCAGTCTCCGTCATCTTCTCCTCCtgaatgtatattttgtaaggGTCAGCATCGTCTTTACGAGTGCGCTGCATTCAAGGATAAATCGGTAGGATGA
Protein Sequence
MEPQKRRKVYSKTQLAEAIKAINDGTSVYEASKRFNIPKTTLRDKRDGKYKNEICGVQPVLNLSEEKQIVDWIHYLGKMGFPVTKEQLLEAVAKLVQNLNRPNPFKNGVPGRYWFENFIKRHPTVSKRVAQNLPSSRNQVTEAAIRAWFDRVNNYFMTNNLHHVLEDPRRVFNCDETAFFLCPKEKEVLVSRGSKRVYNRVANDEKECLTVLVNVSADGNLAPPMILFPYKRLPKNLVPTLPRGWGLGNTESGWMNTEAFYEYVTNCFYPWLITNEIPFPVVLFLDGHTSHISLPLSTFCKEKAIILVALLPNSTHILQPLDVAVFRPVKGTWRTVVHEFRIQNNYAKLKRTDFAPAVKKCFDQCLKPETIQSGFRCCGLYPFDPSKINYSKLLPNLKYTEDINHITTFEYAEKFKRDFEARLSPITLQTFKDSGGQWMGDPTYKKLFEYWKKITPENAINQESGSILQLGESTLNNNFVNETPDISEAILNFDIVAESNLILPIEQGSEVLGEEASNLSLFIEKPLPSSPTVNFLIVQDEFNQFLQTSTPQQDNILLPSTNELTPLSTSILAPENNTLIEITAEPLQTLQKYTPSPKNATNETAPKTSGSSAIPTPFKNYATPFKNALYFPKNNIDYNKKKTLNKKLTPTVAISDEFMEYQRRIIKEKEDKENKKIKRKQEILEKREQKELLKKTTTLKKKKPIKKVNAVNKEDSPVAGPSKYQSDSEFDFNLLPKEAAKRRVLCNSELENESNKGHEHSNGTLINDRDSFETETTVRLLESDSARETVKRRVLYSTDYELSTSEVEPGLTKLSCFLDLEADRNARHAKPELTALPVRSSQPAATKRSHPRSFATAGTSENARSGQCDRVRATERQDGATRHKPQTKALATSSKEQSPSSSPPECIFCKGQHRLYECAAFKDKSVG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00761590;
90% Identity
iTF_00952648; iTF_01118218; iTF_01029163; iTF_00375116; iTF_01029165; iTF_01029166; iTF_00758095; iTF_00758096; iTF_00761589; iTF_01340000; iTF_01527051;
80% Identity
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