Gfla020264.1
Basic Information
- Insect
- Gortyna flavago
- Gene Symbol
- clz9
- Assembly
- GCA_963669345.1
- Location
- OY770144.1:4476838-4479252[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-08 2.2e-05 24.9 0.0 3 36 13 46 11 50 0.93
Sequence Information
- Coding Sequence
- ATGGAGCCACAAAAGCGTAGAAAAGTTTACAGTAAAACACAACTCGCCGATGCAATCACAGCAATTAATGACGGTACAAGTGTATATGAGGCATCAAAAAGGTTTAATATTCCCAAAACTACATTACGAGACAAACGGGACGGGAAATATAAGAATGAAATTTGCGGAGTTCAGCCGGTTCTTAATTTTAGTGAAGAAAAACAGATTGTAGACTGGATTCACTACCTTGGGAAGATGGGATTTCCAGTTACAAAAGAACAATTATTAGAAGCAGTGGCTAAGCTAGTCCAAAACTTAAATCGTCCAAACCCTTTTAAAAATGGTGTGCCTGGCAAATATTGGTTTGAGAATTTTATAAAGAGACATCCAACAGTATCTAAACGCGTTGCACAAAATCTTCCTTCAAGCCGAAATCAAGTCACAGAAGCGGCTATACGTGCATGGTTCGACAGAGTGaacaattattttatgaaaaataatctGCATCATGTTTTAGAAGATCCTAGACGAGTGTTTAACTGTGACGAAACTGCTTTCTTTTTATGCTTAAAAGAGAAAGAAGTTTTGGTCAGCAGAGGTAGCAAACGAGTGTATAATCGTGTTGCTAATGACGAAAAAGAGTGCTTGACTGTGCTTGTGAAAGTTTCAGCTGACGGCAATCTAGCACCTCCAATGATACTTTTTCCATATAAACGTTTGCCAAAAAATCTTGTGCCTACATTACCTCGTGGATGGGGACTTGGTAACACGGAATCGGGTTGGATGAACACAGAAGCATTTTACGAATATGTTACCAATTGCTTCTATCCGTGGCTTGTAACAAATGAAATACCATTTCCAGTAGTTTTGTTTTTGGATGGTCACACATCTCACATATCACTTCCACTATCAACATTCTGTAAAGAAAAAGCAATCATCCTGGTAGCTTTACTTCCCAACTCTACACATATACTACAGCCGCTTGACGTAGCTGTTTTCAGACCAGTCAAAGGAACATGGAGGACTGTTGTGCATGAATTCAGAATTCAAAATAACTATGCCAAGCTTAAACGCACTGATTTTGCTCCGgcagtaaaaaaatgttttgaccaatgcCTTAAGCCTGAAACCATACAGAGCGGATTCCGATGTTGTGGATTATATCCATTTGATCCATCTAAAATAAACTACAGTAAACTGTTGCCAAATTTAAAACATACTGAAGACCTCAACCGTATAACCACATCTGAATATGCAGAAAAATTTAAACATGATTTCGAGGCTAGATTGTCACCtataaccttacaaactttcaaagaTTCGGGAGGCCAATGGACGGGAGATCTAACTTATAAAAAGTTATTCGAATATTGGAAGAAAATTACCCCCGAAAACGCCATAAATCAAGAGAGTGGAAGTATTCTGCAGTTAGGGGAATCAACACTAAATAACAATTTTGTGAATGAAACGCCAGATATATCTGAGGCTATCCTAAATTTTGATATAGTTGCTGAGAGTAATCTAATACTGCCAATAGAGCAAGGTTCAGATGTATTGGGAGAAGAGGCATCCAACTTATCCCTGTTTATTGAAAAACCTCTACCCTCGTGGCCTACTGTAAACTTATTAACTGTACAAGATGAGTTCAACCAGTTTCTGCAGACATCTACTCCTCAACAAGATAATATACTTCTACCATCTACCAACGAGTTAACACCCTTGTCCACTTCGATTcttacaccagaaaataatactttaattgaaataacCGCGGAGCCGCTACAAACACTTCAGAAGTATACACCATCACCCAAAAATGCAACCAAAGAGGCCGCTCCAAAAACAAGTGGTAGCTCTGCTATTCCCACACCATTTAAGAATTATGCGACACCTTTCAAAAATTCTCTTTACTTTCCGAAGAATACTATCGATTACAATAAAAAGaagacattaaataaaaaactcacGCCAACAGTAGCTATATCTGATGAGTTTATGGAATATCAAAGgagaataataaaagaaaaagaagacaaagaaaataaaaaaataaaaagaaaacaagaaatCTTGGAAAAAAGGGAACAAAAAGAATTATTGAAGAAAACAACGACCTTAAAGAagaaaaaacctattaaaaaagtGAATGCGGTTAACAAAGAAGATTCTCCTGTAGCAGGACCTAGTAAATATCAATCAGATAGCGAattcgattttaatttacttccaAAGCAAGCAGCAAAGCGTCGCGTCCTTTGTAATAGTGAGTTAGAAAATGAATCTAAAAAAGGACATGAACATTCTAATAGTACTTTAATTAATGACAGAGATTCTTTTGAAACAGAAACTACCGTACATCTATTAGACTCTGCAAGAGAGACAGTTAAACGTCGAGTCTTATATAGCAGTGAGTCTGATGATGAATGTATATTTTAA
- Protein Sequence
- MEPQKRRKVYSKTQLADAITAINDGTSVYEASKRFNIPKTTLRDKRDGKYKNEICGVQPVLNFSEEKQIVDWIHYLGKMGFPVTKEQLLEAVAKLVQNLNRPNPFKNGVPGKYWFENFIKRHPTVSKRVAQNLPSSRNQVTEAAIRAWFDRVNNYFMKNNLHHVLEDPRRVFNCDETAFFLCLKEKEVLVSRGSKRVYNRVANDEKECLTVLVKVSADGNLAPPMILFPYKRLPKNLVPTLPRGWGLGNTESGWMNTEAFYEYVTNCFYPWLVTNEIPFPVVLFLDGHTSHISLPLSTFCKEKAIILVALLPNSTHILQPLDVAVFRPVKGTWRTVVHEFRIQNNYAKLKRTDFAPAVKKCFDQCLKPETIQSGFRCCGLYPFDPSKINYSKLLPNLKHTEDLNRITTSEYAEKFKHDFEARLSPITLQTFKDSGGQWTGDLTYKKLFEYWKKITPENAINQESGSILQLGESTLNNNFVNETPDISEAILNFDIVAESNLILPIEQGSDVLGEEASNLSLFIEKPLPSWPTVNLLTVQDEFNQFLQTSTPQQDNILLPSTNELTPLSTSILTPENNTLIEITAEPLQTLQKYTPSPKNATKEAAPKTSGSSAIPTPFKNYATPFKNSLYFPKNTIDYNKKKTLNKKLTPTVAISDEFMEYQRRIIKEKEDKENKKIKRKQEILEKREQKELLKKTTTLKKKKPIKKVNAVNKEDSPVAGPSKYQSDSEFDFNLLPKQAAKRRVLCNSELENESKKGHEHSNSTLINDRDSFETETTVHLLDSARETVKRRVLYSSESDDECIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00761590;
- 90% Identity
- iTF_01083267;
- 80% Identity
- -