Odup007490.1
Basic Information
- Insect
- Ochropacha duplaris
- Gene Symbol
- -
- Assembly
- GCA_951361185.1
- Location
- OX592696.1:12570005-12570631[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-13 3.7e-10 39.9 0.0 5 43 1 39 1 41 0.92
Sequence Information
- Coding Sequence
- ATGAAAAAAGCTATTGAGAAAGTCATATCCAAAGAAATGGGGTTTAACAAGGCTTCTACTGAGTTTAATGTgccaaaaacaacattaaaacgTAGGTTGGAGAAATATATGACTACCCAAGATATGGATAGAGCTACAGAGAAGAAGTTGGGCAGAGATGACGAAACAccgaagaaaagaaaagcagcaACCAAAGGAAAGAAGTCTTTAGTAAAGGGATCGAAGAAgaaaatgacaaaatataaGAACGACACCATACAAATATCATCGAAAggcaaagctagtaaaaaaagtgatataaagGCAACTAAAAAGAACAGAAGTGACAGTTCCTCCGAAGATGATGATGCGGAATGCCTTTACTGTGGCCACATGTATTCGGAATCAACAGATGGGTGGGTGCAATGTCAAGATTGCCAATCATGGGCACATTGCGGTTGCGCTGGAGTAGACGACAACGATGATGAAGTCAAATTTGTGTGCGAAAGATGCTCTGATTAG
- Protein Sequence
- MKKAIEKVISKEMGFNKASTEFNVPKTTLKRRLEKYMTTQDMDRATEKKLGRDDETPKKRKAATKGKKSLVKGSKKKMTKYKNDTIQISSKGKASKKSDIKATKKNRSDSSSEDDDAECLYCGHMYSESTDGWVQCQDCQSWAHCGCAGVDDNDDEVKFVCERCSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01083242;
- 90% Identity
- iTF_01083240;
- 80% Identity
- -