Odup008109.1
Basic Information
- Insect
- Ochropacha duplaris
- Gene Symbol
- nfkb2
- Assembly
- GCA_951361185.1
- Location
- OX592697.1:8856138-8871581[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.8e-10 2.7e-06 28.1 0.0 1 46 28 76 28 81 0.80 2 3 0.00016 0.85 10.2 0.0 129 168 79 115 74 116 0.84 3 3 0.12 6.8e+02 0.7 0.0 151 169 597 615 577 615 0.88
Sequence Information
- Coding Sequence
- ATGGAAAACggagtgattatatactcttcgGAAAACGGTTTCAACGATGATCACAATTTGATTAGGGGAAACGGCCCGTTCCTGCGTATCGTAATACAGCCCCAGAAAAACTTTAGATTTCGATACTCAAGTGAGAATCAATCAGTCGGCTCACATGGATGTCTGCTCGGCGACATTACGGACgggaacaaaaacaaaactcatCCTACTGTCGAGcTTAAAACGTTATGTGACAAAAAAATGAAGGAAATCAATCTGAATATAGTTCGGCTAAAATATAGCGCGCATGATGTCAAAACTAATGAAGAAATATGCGAGGCAATATTTTCACAACCCATATTCAACTTGAAGAATGCCGCAAcgaatgatttaaaaatatgccGCATGAGTCACAGTTGTGGTCGCGCATGCGGCGGAGATGATGTTATCATATTAGTGGATAAAGTCAGTAAAAaggATATACAAATCTGGTTTTATGAGAAGCCGAATCATGAAAGGATTTGGTCTGCAAAAGCCAGATTTACGGAAATGGATGTTCATCACCAATACGCTATTTCCTTCAgAACTCCGCCTTATGACAATCCTGACATCATATCGGATGTGACAGTGTTTGTACAGCTGCGGCGGAAGTCTGATGGAAGAACCAGCAAACCTATAGAATACACTTACAAGGCTgatccattaaaaaaaatggcgaaGAGAAGAAAAATTGCCGAAGtaCGACCACAGGAAGCTCCACGCTTCGTAGAACTCGAGGTGATATTTGTCGATCAGGGAGTTAGTTTAACTCAAATGCAAAATTTACAACCTGATGTATATACCCATGAAAGTGATTCACAATTAAATGTTATGAGTTACGGGTCAAGTGATCCCATGCTAGGACAACCATTACTACCTGCTGCTGGGCAAACGAATGAGTCAGTCGACCTTGGTAACAGTTATGAGGACGAGGATTTGGTTGATCTTTTGAAATATTTCACGGATAATAGTTCGGCATACCTGAGCACCGATTCGGGTCGAGGAGaaGGTAGTAGTATTCATTACCAAGGTGCTCATTGTTCAACTGATGGGCAAAGCACTAAATCTGACGCTGTTCAACCAGCAAAAAGTGCCAACCCTGAATACCTCGCGTACTATACAACAGAAGATGGGGCGGAAGTTAAGAAGCTGGTTAAGGAGTTATGTGAAATAGTTAAAAATAAGAAAGGGCATAATAAACAAGAGCTCAGGAATATTTTGGAAAAACTATTTGAAAAGCGATTGTCTAATGGAGATACTTTCCTCCACATGGCTCTCATTAACAATAGAATTAGCTTCGAATTTATGGTCAAAGTGATACATAACGTTAAATTGGCATTCCTTCTTGACTTGGCAAACGACAATGAACAAACCATACttcaccatgctgtggtttatAATATACCTGAAATCGTGTCTCTTCTCATATCAAAAGGTTGCAATCCCATGATGAAGGATCACGAGGGCAACAATACGGTACACTATGCGGTGAGGTACCAGTCCTGTCTCGAGACGTTACTTGAAGCCATCAAGAAAAACGACGTCATGTGCGATCTTAACGATTGCAACAACGAGAAGCAGTCTCCGTTGCACGTGGCGGCGGTGCTGGACTGCGGTGCGAGCGTGCGTGCTCTGGTGCGTGCCGGCGCCGGGCTCGCCGTGCGCGACGCGCATGCGCGCACGCCGCTGCACCTCGCCGCTTACGACGACAAACTGCAAGTTGTAGAAGCCTTACTCGACTTCATGCAACCTgATGACATAGACTCGTTAGATGGAAATGGTAACACAGCACTGCAAATAGTATGCAGCGCACCTGTGCATGACAACACACGGGACATCGTCAAACTTTTGTTAGAAAAGAAGGCTGATCCCCTTAAACATGAAGATCATAATGTTCCAGCTTGGATGCTAGCACGTAAAAAACCAGAAATCGTTAAGATTATTAAGGACTACCTTCCATCAGGAGTCGTGTACGAGTGTGACCCAAAATCAGGCTCGGAAGATGAATTCGAATCAGCAGATGAAGCTTAA
- Protein Sequence
- MENGVIIYSSENGFNDDHNLIRGNGPFLRIVIQPQKNFRFRYSSENQSVGSHGCLLGDITDGNKNKTHPTVELKTLCDKKMKEINLNIVRLKYSAHDVKTNEEICEAIFSQPIFNLKNAATNDLKICRMSHSCGRACGGDDVIILVDKVSKKDIQIWFYEKPNHERIWSAKARFTEMDVHHQYAISFRTPPYDNPDIISDVTVFVQLRRKSDGRTSKPIEYTYKADPLKKMAKRRKIAEVRPQEAPRFVELEVIFVDQGVSLTQMQNLQPDVYTHESDSQLNVMSYGSSDPMLGQPLLPAAGQTNESVDLGNSYEDEDLVDLLKYFTDNSSAYLSTDSGRGEGSSIHYQGAHCSTDGQSTKSDAVQPAKSANPEYLAYYTTEDGAEVKKLVKELCEIVKNKKGHNKQELRNILEKLFEKRLSNGDTFLHMALINNRISFEFMVKVIHNVKLAFLLDLANDNEQTILHHAVVYNIPEIVSLLISKGCNPMMKDHEGNNTVHYAVRYQSCLETLLEAIKKNDVMCDLNDCNNEKQSPLHVAAVLDCGASVRALVRAGAGLAVRDAHARTPLHLAAYDDKLQVVEALLDFMQPDDIDSLDGNGNTALQIVCSAPVHDNTRDIVKLLLEKKADPLKHEDHNVPAWMLARKKPEIVKIIKDYLPSGVVYECDPKSGSEDEFESADEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -