Osyl013470.1
Basic Information
- Insect
- Ochlodes sylvanus
- Gene Symbol
- -
- Assembly
- GCA_905404295.1
- Location
- FR990145.1:2974759-2987878[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-09 3.7e-05 23.7 12.7 420 513 39 129 5 130 0.65 2 3 0.049 1.3e+03 -1.2 5.7 86 181 145 238 133 290 0.48 3 3 1 2.6e+04 -7.2 8.0 43 198 369 526 324 582 0.40
Sequence Information
- Coding Sequence
- ATGGAATATGTCACACAGAGCCGTCGCGCTCGGCGGGTCGCGTCACGTCGCGCGCAGTACAACGTTGACGCTAGCGTCGCGTCGCCGTCCCGCCCCGTCGGCTGTTTAGACAACCGGATATCACACTCTCGGAGTTCTGCGTCGCCCGATGTCGTGAACAAGGACCTGGGGCTGTCGGAGAGCGATGATGAGACGCCCGCGACCACCACCAGACTCGAGCCCATCCTGTCACCGATCGGCTCGGGGGGCAGCCCGAGCTCGGGCAGCGAGTCGTCGCAGAGCGACTCCGAGTCGGAGTCGTCGTCGGCGGAGTCGACGGAGGCGCCGCCCGCCGTGGCCGTGCCGCAGCCGCCCGAGCGCACCTCCTGGGGCCTCTCGAACTTCGTGCCGCCGCCCGCGCAGCCCCCCGACCACGCGGAGTCGTATGACGCCGGCAAGGAGCTCCGACACGCGTTGGACGATGTTAAGGGAAAACCGAGTCCAATATCGGAGCTGTCGGACTCGGAGACGTCCCCGCCGTCCGCGGGCGCGGCGCGACGTCGACGGTCGGTGGCCGCGCGCGTGTCCACCGCCTCCAGCGACGAGGAGCCGCCGAGGACGCACCATCAGACGCGCACTCAACCGTCGCCCGCTTCCGCCTCGAGCGCGACGACGGGCGTGAAGCGCGGCCGGCGTGAAGCGAAGCCGCGGCCCGACGAGCGGCCGGCGAAGCGGAAGCCGGGCCGGCCGCGCAAGTCCAAGCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCCGCCGCCGACAGCGACCCCGAGCCGGAGCCCGCGGCGCACGCGCTCGACACCAAGACCTTTATATTTCGGAAGGTGTTCACTCCAAAGAAGGGCGACGAGGGCGGCGGGAAGGGTGGCAAGGGGGGCAAGGGGAAGGGGGGCAAGGGCAAGGGCCAGGTGACCATCATCGAGGTGACCGCACCCGAGTGCGACGACGACCGCCGGAGCCGCGAGCGGTCGAACGAGCGACGGAATGAAGAGGCGATAGCGCGCGTGTCGCCGCCGCGGGAGCCCGAGCCGGTCAGGAGGCGGGACGCTGAACGGGTCGACCGCGTCTCCGAACGGGTTGACCGCGTCTCCGAACGGGTCGACCGCGCGTCCGAACGGGTCGACCGCGTCTCCGACCGCATCTCGGACCGCATCTCCGATCGGATCGCGGATCGTACGTCCAACGACAGGCTACCGCCGGACAGGACCGAGCGGCACGCGGAAAGGATACCCAATGACAGACTCCAACCTGATAGACTCCAGCCGGATAGGCTTCAGCCGGACAGACTCCAGCCGGATAGGCTACAGTCGGATAGATTGCAGCCGGATAGGCTCCAGCCGGAGAGACCGCAGCCGGACCGCAGATCGATCGAGAGGTTCCAGGAGAGGATGCAGCACGAACGGATCGCGTACGAACGACTGCAGGCTGAACGGTTGGCGAACGAGAAGTTGTCGAACGAACGGCTGCAGCCGACCGTCGAGAGGATGGTGACCGATCGTATGTCAAACGACCGGTTATCGAGCGATCGGCTGTCGAACGACCGGTTATCGAGCGATCGGCTGTCGAACGACCGGTTGTCGAGCGATCGGCTGTCGAACGACCGGTTGTCGAGCGATCGGCTGTCGAACCAGATCGGCGATAAGTTAGACCGTTTAGTGGACAAGCGTGATAGGTTGTCCGGTGATAAATCTCACGATCGGTTGGCGGATAAGATGATGGATTGCTTGCCCGGGGACAAGATATCGCTCGACAGGGTGAACATGTCGGACCGGATCGCGCAGGAGCGGTACGTCAGGGCGGAGGCCGACGTCGGCTCCGGGCTCAAGTCCGGCCGGGGGTCGGAGCGACTGGAGGATGCCACTTCCAATGGTCGCGGGCGCGCGCGCGTGCTGGTCCGCATCGCGCTGAGCCGGCTGCGGCCGGAGCGGCTGCGCGCGCTGCAGCGGCCCGCGCGCCGCCCGCCCGCGCCGCGCGCCGCCACGCCGCCGCCCGACCAGGTGCGTGCCGACACCGCATACTATACCTACAAGTGTTGGGGCGCGTTCACATGGAACGTCCGTTTTACTGGATCCGTTTTAACGGGTGTGCGTGAGCGCTTCGAGCCGTGCGCGGTGCCGCCGGGGATGCGCGGCTCGGGCTAG
- Protein Sequence
- MEYVTQSRRARRVASRRAQYNVDASVASPSRPVGCLDNRISHSRSSASPDVVNKDLGLSESDDETPATTTRLEPILSPIGSGGSPSSGSESSQSDSESESSSAESTEAPPAVAVPQPPERTSWGLSNFVPPPAQPPDHAESYDAGKELRHALDDVKGKPSPISELSDSETSPPSAGAARRRRSVAARVSTASSDEEPPRTHHQTRTQPSPASASSATTGVKRGRREAKPRPDERPAKRKPGRPRKSKPQSPPPPPPPPPPAADSDPEPEPAAHALDTKTFIFRKVFTPKKGDEGGGKGGKGGKGKGGKGKGQVTIIEVTAPECDDDRRSRERSNERRNEEAIARVSPPREPEPVRRRDAERVDRVSERVDRVSERVDRASERVDRVSDRISDRISDRIADRTSNDRLPPDRTERHAERIPNDRLQPDRLQPDRLQPDRLQPDRLQSDRLQPDRLQPERPQPDRRSIERFQERMQHERIAYERLQAERLANEKLSNERLQPTVERMVTDRMSNDRLSSDRLSNDRLSSDRLSNDRLSSDRLSNDRLSSDRLSNQIGDKLDRLVDKRDRLSGDKSHDRLADKMMDCLPGDKISLDRVNMSDRIAQERYVRAEADVGSGLKSGRGSERLEDATSNGRGRARVLVRIALSRLRPERLRALQRPARRPPAPRAATPPPDQVRADTAYYTYKCWGAFTWNVRFTGSVLTGVRERFEPCAVPPGMRGSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -