Nnit012376.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nymphula nitidulata
Gene Symbol
nfxl1
Assembly
GCA_947347705.1
Location
OX374639.1:15020993-15023467[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1 3.4e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.0052 1.8e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 20 9.8e-08 0.0033 18.3 15.5 3 19 186 202 185 202 0.95
4 20 2e-07 0.0066 17.3 11.5 1 19 237 255 237 255 0.93
5 20 2.8e-09 9.5e-05 23.2 11.5 1 19 290 308 290 308 0.99
6 20 1.5e-05 0.51 11.3 18.2 3 19 345 361 337 361 0.86
7 20 1 3.4e+04 -5.3 2.2 5 10 384 389 384 389 0.88
8 20 3e-06 0.1 13.5 18.3 1 18 395 412 395 413 0.97
9 20 2.5e-10 8.5e-06 26.6 13.0 1 19 422 440 422 440 0.99
10 20 0.36 1.2e+04 -2.7 1.3 5 10 468 473 468 473 0.91
11 20 3.6e-05 1.2 10.1 6.1 9 19 488 498 486 498 0.90
12 20 0.0056 1.9e+02 3.1 7.8 3 12 509 518 508 518 0.91
13 20 0.19 6.3e+03 -1.8 3.3 14 18 547 551 547 552 0.85
14 20 0.11 3.8e+03 -1.1 0.2 8 12 568 572 567 572 0.79
15 20 9.2e-05 3.1 8.8 5.4 1 11 588 598 588 599 0.97
16 20 0.35 1.2e+04 -2.6 1.4 15 18 613 616 612 617 0.83
17 20 8.8e-06 0.3 12.0 14.4 1 18 628 645 628 646 0.89
18 20 1 3.4e+04 -6.5 3.4 9 13 652 656 652 656 0.71
19 20 2.3e-05 0.77 10.7 11.8 1 16 687 701 687 707 0.86
20 20 0.52 1.7e+04 -3.2 1.2 5 10 736 741 736 741 0.93

Sequence Information

Coding Sequence
ATGGCTAGAAGGTATCGCGATGCTGCTGCGAAACTACAGCAAAATGTGCAAAAACATTTGAAAGACATGAAGGAGCTTTCTTCTTCTGAAGATGAGGAGCCTTACGAGTCTAGTGTCTTGGATGGAGTATTCCAGTCTTACAGAAGAGGAGGAGGTGATGTCGATTTATTAGATCGCACCAGACATCTTTTAGAAGAAGCAATTAGCGGCCGGTCTGTAACCTGTCTTATTTGCATTGGTTCCATCAAGCGAGCAGACGCCATATGGTCTTGCGACCACTGTTTTTGCTACTTTCACCTATCTTGCATACAGAAATGGGCGAACGATAGTGTCAGCCTCAGAAATGAGGAAGTTCAAGGCCCAATAGCACTATTTGTGCCCAGAAAAATTGAATGGTGTTGTCCTAAATGTCGTCACTCATATAGTAAAGAAGAAATACCACGAAGGTACCAGTGCTTTTGTAGTAAAACTGTAGACCCACCATTTCACCCTTGGTTAATTCCTCACACATGTGGAGAAGTTTGTGGTAAGCCCCTCTCAAAAGGTCAGAGCTGTAGACACAAATGCTTACTGCTCTGTCACCCTGGTCCATGTCCCCCTTGCCCTCAGACTGTTAATGGAGCTTGCTACTGTGAGAAAGAACGAAAAAGAGTCCGTTGTAGTGCTGCAACATGGTCTTGTGGTCAACAGTGTCAGAAGACCCTTCTATGCAATTCACATAAGTGTGAAAATGTGTGCCACCAGGGAGTTTGTGCTCCATGCAGTTACGTAAGTGTACAACCTTGTCAGTGTGGCTTTGAGGAAACTAAACGTCCTTGTAATGACCCTAAATGGCAATGCAGAAAAGTTTGTAATAAACCATTTTCTTGTGGATATCATAAGTGTGACCAAGTATGTCATGCAGGAACTTGTAGCACATGTCCGAACTCTGGGATGCGGTCATGTCCATGCGGTGCAAATCAGAGATTTGTACAATGTCCAGATGCTATGGAGACATGCTTAGGAACATGTGGAAAGAAGCATGATTATTGTGAACATAATTGTCCCGAAAAATGTCATAATGGCACATGCCCTCCATGTCAGGTTTTGATAGAAAAGAAGTGCCAATGTTCAGCACATACAAGAATGTTACCTTGCAGCAAGGAATATAAGTGTGAGACAAAATGTCGGGGCATAAGACCATGTGGCAAGCATGGCTGTGCAAGAAAATGTTGCAATGGGAACTGTCCACCATGTGAGAAAGTGTGTGACAAGCCACTACAATGTGGCAGGCATAAGTGCACAATGGTTTGTCATCGTGGTCCATGCTACCCTTGTCCAAGGGAGTCCAAAATAATGTGCAGGTGCAAAGATACATTTGTCACAGTTCCATGTGGAAGAGAAAAATACACAAAACCACCAAAATGTAGCAAACCCTGTAAAATAAAATACAAGTGTGGTCATGTCCAGGAAAATAAACACACTTGTCATTTTGGAGACTGTCCTCCTTGCAAAGCTATATGCTGCAAGTCATATCCTAACTGTCAACACCAATGTAAAGCTGTATGCCATGAATTTGTAGTGGTTGTTTTTAAACAAGTTGAAAAACCAGCGACTCCATGGGAAATTACTCCACCAAAAACCAAAATAATGAATTTAGAGTGTCCTCCATGTGAGACACCTGTCCCTGTTATTTGCTTTGGAGAACATGAAACCGATAATCAACCCTGTCATTCAGCAAAAAGAAGATGCTGTGGAAAGATATGCAATAAACCATTGGCTTGTGGAAATCACACCTGTTTGTTACAATGTCATTTATATGCTTCAGATCCTGTGTATCCAAGTGTGCCTTTTAAATGTAAGCCATGTGATAGAGACTGTACTGCAACCCGTCCAGAAAAATGTTCCCATAAGTGTAATATACGGGCTTGTCATCCTGGCCCATGTCCCCCTTGTGAAATATATGAACGAATTCCTTGTCATTGTGGAATCACAGAGTTATATTTCCGATGCTGCGAACTTTCTACTGCTACTGAAGAAATGTTATCTTGTAAAATGCAATGCCCGAAGAACTTAGAATGTGGCCACCGCTGCAGGAATAATTGTCACTTAGGCCCCTGTGGTATTGGTCAAGTTTGCAACAAAAAGACTAAAGTGTATTGCCCATGTGGCAACCTAAAGAAGGAGGCTGCCTGCAATCTTGTTAAAAGTGGAGAATTTAAAATTACTTGTAATAACACTTGTGAAGTAAAAAAGAATGCTACGAAGTTAGAAAAGGAGAATGAACAAAGAAGATTGAAAGAGATTGAAGAGGAGAAGAACCGTAAAGAGTTAGCAGAGTATGAGTGGAAAATGAGTGGTAAAAAGAAGAAGTATAAAGAAAGGAAGTTAATAGAGAACATAGATGATAGAAATGTTCTTCAAAGGTATTGGTTTCTTATTTTGGCATTTTTAATTGCTGTAGGTGGTACATTTTACATGATTGTTAAAATATAA
Protein Sequence
MARRYRDAAAKLQQNVQKHLKDMKELSSSEDEEPYESSVLDGVFQSYRRGGGDVDLLDRTRHLLEEAISGRSVTCLICIGSIKRADAIWSCDHCFCYFHLSCIQKWANDSVSLRNEEVQGPIALFVPRKIEWCCPKCRHSYSKEEIPRRYQCFCSKTVDPPFHPWLIPHTCGEVCGKPLSKGQSCRHKCLLLCHPGPCPPCPQTVNGACYCEKERKRVRCSAATWSCGQQCQKTLLCNSHKCENVCHQGVCAPCSYVSVQPCQCGFEETKRPCNDPKWQCRKVCNKPFSCGYHKCDQVCHAGTCSTCPNSGMRSCPCGANQRFVQCPDAMETCLGTCGKKHDYCEHNCPEKCHNGTCPPCQVLIEKKCQCSAHTRMLPCSKEYKCETKCRGIRPCGKHGCARKCCNGNCPPCEKVCDKPLQCGRHKCTMVCHRGPCYPCPRESKIMCRCKDTFVTVPCGREKYTKPPKCSKPCKIKYKCGHVQENKHTCHFGDCPPCKAICCKSYPNCQHQCKAVCHEFVVVVFKQVEKPATPWEITPPKTKIMNLECPPCETPVPVICFGEHETDNQPCHSAKRRCCGKICNKPLACGNHTCLLQCHLYASDPVYPSVPFKCKPCDRDCTATRPEKCSHKCNIRACHPGPCPPCEIYERIPCHCGITELYFRCCELSTATEEMLSCKMQCPKNLECGHRCRNNCHLGPCGIGQVCNKKTKVYCPCGNLKKEAACNLVKSGEFKITCNNTCEVKKNATKLEKENEQRRLKEIEEEKNRKELAEYEWKMSGKKKKYKERKLIENIDDRNVLQRYWFLILAFLIAVGGTFYMIVKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00006764;
90% Identity
-
80% Identity
-