Aeph010587.1
Basic Information
- Insect
- Acentria ephemerella
- Gene Symbol
- nfxl1
- Assembly
- GCA_943193655.1
- Location
- CALPDL010000064.1:690738-693212[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1 2.2e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.0052 1.1e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 20 1.6e-07 0.0034 17.6 15.9 3 19 186 202 185 202 0.95 4 20 1.7e-08 0.00037 20.7 11.9 1 19 237 255 237 255 0.93 5 20 0.66 1.4e+04 -3.5 1.8 6 10 280 284 279 284 0.89 6 20 3.9e-10 8.4e-06 26.0 12.6 1 19 290 308 290 308 0.99 7 20 1.3e-05 0.27 11.6 19.0 3 19 345 361 337 361 0.88 8 20 1 2.2e+04 -5.3 2.2 5 10 384 389 384 389 0.88 9 20 3.4e-07 0.0073 16.6 16.7 1 18 395 412 395 413 0.97 10 20 4.7e-10 1e-05 25.7 11.5 1 19 422 440 422 440 0.99 11 20 0.23 5e+03 -2.1 1.0 5 10 468 473 468 473 0.92 12 20 3.6e-05 0.79 10.1 6.1 9 19 488 498 486 498 0.90 13 20 0.0056 1.2e+02 3.1 7.8 3 12 509 518 508 518 0.91 14 20 0.59 1.3e+04 -3.4 1.2 14 18 547 551 547 552 0.82 15 20 0.13 2.8e+03 -1.3 0.2 8 12 568 572 567 572 0.79 16 20 1.6e-06 0.035 14.4 4.7 1 11 588 598 588 599 0.97 17 20 0.35 7.5e+03 -2.6 1.4 15 18 613 616 612 617 0.83 18 20 1.3e-05 0.29 11.5 14.8 1 18 628 645 628 646 0.88 19 20 7.8e-06 0.17 12.2 12.2 1 16 687 701 687 707 0.86 20 20 0.72 1.6e+04 -3.7 0.9 5 10 736 741 736 741 0.90
Sequence Information
- Coding Sequence
- ATGGCTAGAAGGTATCGCGACGCCGCTGCAAAACTACAGCAAAATGTGCAAAAACATTTGAAAGACATGAAAGAGCTTTCATCTTCTGAAGATGAGGAGCCTTATGAGTGTACCGTTTTGGATGGAGTGTTCCAATCTTACAGAAGAGGAGGGGGCGACGTGGACTTATTAGAACGCACCAGGCATTTGTTAGAAGAAGCAATTAGCGGCCGGTCTGTAACCTGTCTCATTTGTATAGCGTCCATCAAGCGAGCAGATGCTATATGGTCTTGCGACCACTGTTATTGCTATTTTCACATATCATGTATACAAAAATGGGCCAATGATAGTGTTACTCTTAGAAATGAAGAAACACAAGGCCCTATTAGAGTATTTGTGCCCAGAAAAATTGAATGGTGTTGTCCTAAATGTCGCCACTCGTATAGTAAAGAAGAAATACCCCGAAGATACCGGTGCTTTTGTACTAAAACTGATGACCCACCATATCACCCTTGGTTAATTCCTCATACTTGTGGTGAAGTTTGTGGTAAGTCTCTTTCAAAAGGACAGAATTGTAAACACAAGTGCTTACTGCTTTGTCATCCTGGTCCATGCCCCCCATGCCCTCAGACTGTTAATGGAGCTTGTTACTGTGAGAAAGAACATAAGAGAGTTAGGTGTAGTGCTGCAACATGGTCTTGTGGTCAACAATGCAGGAGGACCCTGTTATGCAATTCACATAAGTGTGAAAATGTGTGCCACCAGGGAGATTGTGCTCCATGTAGCTATGTTAGTGTACAGCCTTGTCAATGTGGCTTTGAAAAAACTAAACGTCCTTGTAACAACCCTAGGTGGCAATGCAAAAAAGTTTGCAATAAACCATCTTCTTGTGGGTATCATAAGTGTGACCAAGTATGTCACGCAGGAAATTGTGGCTCGTGTCCCAACTCTGGCATGCGATCATGTCCGTGTGGCGCAAATCAGAGGTTTGTACAATGTCCAGATATTATGGAGACATGCTTAGGAACTTGTGGCAAGAAGCATGAAAGTTGTGATCATAACTGTCCAGAAAAATGTCATAAAGGCACTTGTCCTCCCTGTCAGGTTTTGATAGAGAAAAAGTGTCAATGTACAGCACACACGAGAATGTTGCCTTGTAGCAAGGAATATAAATGTGAGACTAAATGTCGAGGTATCAGGCCATGTGGAAAGCATGCCTGTGCTAAAAAATGCTGCAATGGGAACTGTCCACCATGTGAAAAAGTGTGTGATAAGCCACTACAGTGTGGCCGGCATAAGTGCACAATGGTTTGTCATTATGGCCCTTGCTACCCTTGTCCAAGAGAGTCTAAAATAACATGCAGATGCAAAGAAACATTTTTTACAGTTCCATGTGGAAGAGAAAAACATATGAAACCTCCGAAATGTAACAGACCCTGCATGATAAAATACAAGTGTGGTCATGTTGACGAAAACAAACACACATGTCATTTTGGAGATTGTCCTCCTTGCAAAGCTATCTGCTGCAAGTCATATCCTACCTGTCAACACCAATGTAAAGCTGTATGCCATGAATTCGTTGCAGTGGTTTTCAAACAGGTAGAAAAACCAGCAACTCCATGGGAAATCACTCCTCCAAAAACAAAAATTATGAACTTAGAGTGTCCTGCGTGTGAGACACCTGTACCTGTAATTTGTTTTGGAGAACATGAGACAGAAACCCAACCATGTCATTCAGCAAAAAGAAGATGCTGTGGAAAGATATGCAATCAACCATTGGACTGTGGTAACCATACCTGTTCCTTACTTTGTCATTTATATGCATCAGATCCTAAGTACCCAAGTGTGCCTTTTAAATGTAAGCCATGTGATAGAGAATGTGCTGTTACCCGTCCAGAGAAATGTTCTCATAAGTGTACTATACGTGCTTGTCATCCAGGTCCATGTCCACCTTGTGAAATATATGAAAGAGTTCCCTGTTATTGTGGTATTACAGAGTTATATTTGCGATGCCGTGAGCTTTCTACTGCTACTGAAGAAATGTTATCTTGTAAGATGCAATGCCCAAAGAACTTAGAATGTGGTCACCGGTGCAAAAATAATTGTCATTTAGGACCCTGTGGGATTGGTCAAGTGTGTAATAAGAAGACTAAAGTATACTGCCCATGTGGTAACTTAAAAAAGGAAGCTCCCTGTAATCTTGTTAAGAGTGGAGGGTTTGAAATTACTTGTGATGAGAGTTGTGAATTAAAACAGAATGCTGCAAAGATGGAAAAAGAGAATGAACTACGTAGATTGAAAGAAATTGAAGAGGAGAAAAACCGTAAAGAGTTGGCAGAGTATGAATGGAAGTTGAGTGGTAAAAAAAAGAAGTATAAAGAACGGAAGGTGATAGAAAATGTAGATGATAGAAATATACTTCAAAAGTATTGGATACATACTTTGGCATTTTTAATTGCAATAGGAGGTGCACTGTACATGATTATTGAAATTTAA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKDMKELSSSEDEEPYECTVLDGVFQSYRRGGGDVDLLERTRHLLEEAISGRSVTCLICIASIKRADAIWSCDHCYCYFHISCIQKWANDSVTLRNEETQGPIRVFVPRKIEWCCPKCRHSYSKEEIPRRYRCFCTKTDDPPYHPWLIPHTCGEVCGKSLSKGQNCKHKCLLLCHPGPCPPCPQTVNGACYCEKEHKRVRCSAATWSCGQQCRRTLLCNSHKCENVCHQGDCAPCSYVSVQPCQCGFEKTKRPCNNPRWQCKKVCNKPSSCGYHKCDQVCHAGNCGSCPNSGMRSCPCGANQRFVQCPDIMETCLGTCGKKHESCDHNCPEKCHKGTCPPCQVLIEKKCQCTAHTRMLPCSKEYKCETKCRGIRPCGKHACAKKCCNGNCPPCEKVCDKPLQCGRHKCTMVCHYGPCYPCPRESKITCRCKETFFTVPCGREKHMKPPKCNRPCMIKYKCGHVDENKHTCHFGDCPPCKAICCKSYPTCQHQCKAVCHEFVAVVFKQVEKPATPWEITPPKTKIMNLECPACETPVPVICFGEHETETQPCHSAKRRCCGKICNQPLDCGNHTCSLLCHLYASDPKYPSVPFKCKPCDRECAVTRPEKCSHKCTIRACHPGPCPPCEIYERVPCYCGITELYLRCRELSTATEEMLSCKMQCPKNLECGHRCKNNCHLGPCGIGQVCNKKTKVYCPCGNLKKEAPCNLVKSGGFEITCDESCELKQNAAKMEKENELRRLKEIEEEKNRKELAEYEWKLSGKKKKYKERKVIENVDDRNILQKYWIHTLAFLIAIGGALYMIIEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01082102;
- 90% Identity
- -
- 80% Identity
- -