Nurt012506.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nymphalis urticae
Gene Symbol
Hr39
Assembly
GCA_905147175.1
Location
LR989985.1:12226405-12235278[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.38 5.3e+03 -2.9 2.2 115 128 171 184 54 246 0.41
2 4 2 2.8e+04 -7.1 9.9 76 161 220 311 147 364 0.51
3 4 2.4e-08 0.00034 20.8 0.1 1 22 445 466 445 486 0.88
4 4 4.9e-65 6.9e-61 207.5 0.0 157 408 503 763 477 763 0.84

Sequence Information

Coding Sequence
ATGAATACCGCGATGTCGAGCGAGGAGGCGGTAAAGGTGGAAGGGGGACATGTCTCCGTCACAACAATCAGCATGTCTGGTCCAGAAACTAGCAACGGTCAGTTCTCCTACAGCTCGAGCGGAGTGCGCATCAGCGTGTCTTCAGAACCTCACGATGAGGATTCCACTGATGCCGAAATCTCCAAAATCGATTTCACGCAACATCAATACGAGGTGAACATGAGAAACAAAAAGAAGCGTTCGTCAAGCGGACAGTGCGAACAGAATGCAGAACAAGAACGTCCTATGTCCTGGGAAGGGGAGCTCTCCGACTCTGAAATGGTTATTGATACCAGTGTCAACAATGATGAAAACAGCAGCTCTCTCGACTTGCAATCCTCGCGGGACTCCATCGACACTCTTCGAAACGTGACCATTAAGACTGAGAAACTCAGAGAAGATCCCCTCAAACTAGAAGCGTTTCAGAGCTTGGACGATCAACGAGTTCTGGACCTCAAATACAGCGTCCCCTTGCAATCGCACCAGCGGAGCCTCAGCATGAACAGGATATCAGTGCTAACGGATAATACGTCTCTATCCCTCGCGAGACGACCGTCGTCGCCGACAAGCAGCGCTAAATCGACGATGTCCGATCACTACGACACGACGCAACTGATGCACAATCCTGTCGGAGAAGTCCAGAACTTGACTATCAAGAAGGAAACCCAATTGTCTGAACTAAAATGCGAACCAACAGTGGGTATGGACAAGTTATTAGGTCTCCACGGTTCGCCGTTGTTAGGTAGACTGCCTCGGGTCCAATCGAGTGCCAGTACGGATTCCGCCGTACATTCTATGTACACACATAGTGTATACAGTAGTCCTTCAGCTAGTCCTCGTCCGTCTCGTCACTATACGCCGTCTCTTTCTCGCAACAACAGCGACGCATCACACTCGTCGTGTTACTCATACAGTTCCGAGTTCTCACCTACTCATTCGCCAGTTCAGGGCCGACATCCTCACGTTGTATACCGCGAGGCGACAGTCTTCCCCGCCTCCCCCGCGCATGACGAAGATACGGATACAACTGATGAACGCCTTCATCATCATCAGGGTATTAGCAGACAACAGCTTATTAACAGTCCGTGTCCAATTTGCGGTGACAAGATAAGCGGTTTCCATTACGGAATATTCTCCTGTGAATCCTGCAAGGGATTCTTCAAGCGGACCGTACAAAACCGGAAGAACTACATGTGTCTTCGCGGTGGGAACTGTCCCGTCACTGTTGCCACGAGGAAAAAGTGTCCCGCCTGCAGATTCGACAAGTGCTTGGGATGTGGAATGAAGCTCGAAGCGATCAGGGAGGACCGCACGCGCGGCGGGCGCTCCACGTACCAGTGCTCGTACACGCTGTCGGGCGCGGCGTCCACGGGCTCGCTGCTGTCCGCGCACGCGCCCGCCACGCTGCGCCACGCCTCCAGCCTCACTTGCGTAAATGGCCCGGGATCGTACACCAGTCGAGGAGAATCAAGCAACAGCCGACTCACGCCCGACATACCGCCGTTATTACAGGAAATAATGGACGTGGAACATTTATGGCAATACAACGAGTCGGAGCTCAGCAGGATGAGCAAGTCGACGGGCAGCCCGTCCGCCAACCCGCTGCTGGCGGCCAGCGGCATCACGGCGCAGAACTCCAGCGCCGACTTCCTCGCCGACCTCTGTAACATCGCGGACCACAGGCTCTACAAGATCGTCAAGTGGTGCAAGAGTTTACCGCTCTTTAAAAATATATCGATCGACGACCAGATCTGCCTGCTGATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTACCGCGGCGTCAGCACGCCGGGCGAGGTGCGCGTGGGCGGCGGCCGCGGGATCACGCTGCACCAGAGCGCCAAGTACGGCTTGACACCATGCATAGAACGAATGCTTAGTTTCACGGACCACTTGAGAAGGTTACGAGTGGACCGATATGAATACGTTGCGCTCAAAGTCATTGTACTACTCACTTCAGACGCACCAGAATTGCGTGAAGCGGAAAAAGTGCGTGCATCCCAAGAAAAAGCGCTCGCAGCGCTGCAAGCGTACACAGCGACGCATTCGCCCGATACGCCCGCTAAGTTTGGCGAACTGCTTCTGCGTATACCCGAGTTACAACGAACTTGCCAGTTTTTCATGCAAGTCGGAAAGGAAATGCTTAACCCGGCTAATAAGGGCAAGGACGGTGAAGGTCCAAGCTTCAATCTCCTTATGGAACTTTTAAGAGGCGACCATTGA
Protein Sequence
MNTAMSSEEAVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSEPHDEDSTDAEISKIDFTQHQYEVNMRNKKKRSSSGQCEQNAEQERPMSWEGELSDSEMVIDTSVNNDENSSSLDLQSSRDSIDTLRNVTIKTEKLREDPLKLEAFQSLDDQRVLDLKYSVPLQSHQRSLSMNRISVLTDNTSLSLARRPSSPTSSAKSTMSDHYDTTQLMHNPVGEVQNLTIKKETQLSELKCEPTVGMDKLLGLHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRPSRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVVYREATVFPASPAHDEDTDTTDERLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYTLSGAASTGSLLSAHAPATLRHASSLTCVNGPGSYTSRGESSNSRLTPDIPPLLQEIMDVEHLWQYNESELSRMSKSTGSPSANPLLAASGITAQNSSADFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHQSAKYGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTATHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKGKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00985246;
90% Identity
iTF_01018623;
80% Identity
iTF_01080814;