Basic Information

Gene Symbol
-
Assembly
GCA_905147175.1
Location
LR990006.1:5085724-5087964[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.83 1.4e+03 0.1 0.0 19 33 222 237 218 248 0.74
2 5 4.3e-07 0.00071 20.3 0.3 1 45 257 303 257 304 0.91
3 5 1e-09 1.7e-06 28.6 0.3 3 42 312 355 310 358 0.93
4 5 7.1e-11 1.2e-07 32.4 0.0 1 43 363 405 363 407 0.97
5 5 3.1e-08 5e-05 23.9 0.0 3 44 415 458 413 459 0.96

Sequence Information

Coding Sequence
ATGGATGACTTTGAAGTTGATGAAGAGAGTGATGAAGAAAATGAGATTCAAGACTTGGAGCAACTTACTGCAGTATTAATTGAGGATGAGCCTAGCTCAAGTGCATCAGTTTCACAGATATCAACAAGCACAAGTGTCTGCAGTTTTTCTTCTAAGTACGAGGAGTATTCAAAAATCGAAACTACTATAGCTTTTAATAAAATGTGTGATGAAAAGTTATCCAGATTAGAGAAAATGTTACAATCACGTTTACGTGAGTGTCGACAAAAGTTAAGCGATATACAGGGTACCGAATGGAGTGACAAATTAGAAAAAATTGAGAAATTCCGTTATGTAAACTGCGGGAAACCTTATTTTAAAGACAAGTCGAATTTCCCAGCTCCAGATAATGATGACACTCTAATAATGAACAAATCTGAAATGTATGACTTTTCAAATATTGTATCTGTTCCGGGTTGGACAGTTAAAGATAAAAGCCAGTTTATGGTTTTAATACATAAATTGTCTCAAGTAAAAAGAAAAAAAGAGTTAGAATCGAAAATAGCAGCTTTAAAACGTGAAAATAAAGTTCATCAAAACAAAAATGATAAGGAAATTGCAAAACTAACGAAAGAAATTCATTCTGTAAATAAAATATCACCAAAGGATTTAGCGCTGCCGTTACATGAAGAATATGATTGGGATTACATTGCAAATAAACTAAATTATAGACATAGTGCACAGGAATATAGATCTCTTTGGAAGTTATTCCTTCATCCGAGTATAAATAAAAATGTTTGGAGTAGAACAGAGCATATCACACTGCAAAAAGTTGCTTATGATGAAAAACTACAAAACTGGGACAAGATAGCTGAAAAATTAAAAACTGGTAGAACAAATTACCAGTGCTTTGTATATTTCCGAACAAACATGATTAATACATTCACAGGCAGAAAATGGACTAAAGAAGAAGAAGAGTACCTTAAAAGATTAATTGAATATTACAAAGAAGATAATTACATACCTTGGGGTAAAGTAGCAGCCTCAATGGAGAACAGAACTAAGATTCAAATTTACAATAAATATTCTAGGATGTGTGAACAAAGAAAAGGCAGATTTTTAGCAGAAGAGGATGCAGTGATATTAACTTGTTATGAAAATTTTGGTCCGAACTTTAAAAAGATGACAAAATACCTTCCAGGCCGGTCTTTGACGCAATGCCGGACACGGTATCAGGTTTTAGCTAAGAAAAGAATATCAACAGTATGGACAATAGAAGAGGACAGGAAACTTGTCCAGTTAATGGCAAATCAAGATGCAATCACTAATTATTCTAGTGTTGCCCCATATTTTCCTGGGAAAGATAGAGTGCATATAAGAGCTAGGTATTTAACATTATCTAAATGGATGAGAAGAAATCCCAATGTAGATATTGCTAAAGCACCAAGACGTGGTGCAAGACGTTTAGGTCATGGGCAAAGCGCTGATGATTTAAATAGAGCCATAGAGAGTTTGAAAACTAGAATACAATCAGAGGTGACTATTAAAAAAAGTAAAAAGGTAACAAAAGATTCACCAGAAAATGTTATAGAAGATGCTATAATAGCTCATATTGTCACAGAAAGTGTAAAATTAGAAGAAGCAAGAAAAAATGAAATAAATGAGGAAGAACCAGATCCTTCAGATGATGTTTATGACGTTCGTACCAAAAAATGCAATGTGACAAATTTACGTAAAATACTTATTCTGCTAAAAGCGAAATTGAATCATGAAAGGTTTTTGAATAGTTCTTATGGGAAAAAATACCGAGATTTATTAGAGCCAGAACATGAAATGTATACTGTGAAAGTTAGATCTTATTCCAAACAAAATACGGAAACAAGTATAGAAATTAGTGGAAGTCCTGATATCTGGGGAAATGTTTGTTTAGGTCCTTTAGCATATGTACTTCCACCACATTATTCAACCATAACTGGTTGTAAGAAATTAATGAGTTATGTTACTAGTAAACCACAAACAAAAAGTGCAGACCAAATAAACATTAATGTAGTTATAAGAAAAAATGTCATGTTAAAAGTTCAAGCTTTTCTCTTAATGGAGCGATTCAATTCTTTGTTCCTGTGGCCGATGTTACTTTCAAATACACATCCAGATACATCTATTACATTGAATGAAGAAGAAAGACAACTATCACAAAACTATGCCGAAAATTATCCAGTTTTTGATAAGGAAGATTATGCTTCAGCAATGTCAACGAATTAA
Protein Sequence
MDDFEVDEESDEENEIQDLEQLTAVLIEDEPSSSASVSQISTSTSVCSFSSKYEEYSKIETTIAFNKMCDEKLSRLEKMLQSRLRECRQKLSDIQGTEWSDKLEKIEKFRYVNCGKPYFKDKSNFPAPDNDDTLIMNKSEMYDFSNIVSVPGWTVKDKSQFMVLIHKLSQVKRKKELESKIAALKRENKVHQNKNDKEIAKLTKEIHSVNKISPKDLALPLHEEYDWDYIANKLNYRHSAQEYRSLWKLFLHPSINKNVWSRTEHITLQKVAYDEKLQNWDKIAEKLKTGRTNYQCFVYFRTNMINTFTGRKWTKEEEEYLKRLIEYYKEDNYIPWGKVAASMENRTKIQIYNKYSRMCEQRKGRFLAEEDAVILTCYENFGPNFKKMTKYLPGRSLTQCRTRYQVLAKKRISTVWTIEEDRKLVQLMANQDAITNYSSVAPYFPGKDRVHIRARYLTLSKWMRRNPNVDIAKAPRRGARRLGHGQSADDLNRAIESLKTRIQSEVTIKKSKKVTKDSPENVIEDAIIAHIVTESVKLEEARKNEINEEEPDPSDDVYDVRTKKCNVTNLRKILILLKAKLNHERFLNSSYGKKYRDLLEPEHEMYTVKVRSYSKQNTETSIEISGSPDIWGNVCLGPLAYVLPPHYSTITGCKKLMSYVTSKPQTKSADQININVVIRKNVMLKVQAFLLMERFNSLFLWPMLLSNTHPDTSITLNEEERQLSQNYAENYPVFDKEDYASAMSTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00843478;
90% Identity
iTF_01078146;
80% Identity
-