Basic Information

Gene Symbol
SNAPC4
Assembly
None
Location
HiC:7842261-7845281[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.39 4.8e+02 1.4 0.0 22 36 229 244 219 253 0.77
2 5 2.5e-06 0.0031 18.0 0.2 4 45 263 306 260 307 0.89
3 5 2e-09 2.5e-06 27.9 0.3 3 43 315 359 313 361 0.93
4 5 1.2e-10 1.5e-07 31.8 0.0 1 43 366 408 366 410 0.97
5 5 7.7e-09 9.5e-06 26.0 0.0 3 44 418 461 416 462 0.95

Sequence Information

Coding Sequence
ATGTCTGACTTCGATATGGATATAGAGAGTGACGAAGAAAATGAAATTCAAGACTTGGAACAACTCAATGCAGTATTAATTGACGATGAACCCTGCACAAGTGCATCAGCTTCTCAAATTTCTATGAGCACAACCAGTTTCTGTAGTTTTTCGTCTAAATACGAAGAATATTCGAAAATCGAGACAGTATTAGCTCTCAATAAAATGTGCGACGAAAAGTTGCGCCGACTAGAGAAGCTGTTACAATCCCGTCTACGAGAGTGTCGGCAAAAGTTAAGCAATATACAAGGAATAGAGAACATCAGCAATGACAAATACGATAAAGTTGAAACATTCCGCTATGTAAATTGTGGAAAACCTTATTTTAAAGACAAGTCGAATTTCCCAGCACCAGATAATGAAGACACCATACTAATGGCTAAATCTGAAATGTATGATTTTTCGAATATCGTTTCAGTTCCAGGTTGGACAATTAAAGATAAAAGTCAATTTACAGCTCTAATACTCAAGTTGTCTCAAGAAAAAAGGAAAAAAGAATTACATTCTAAAATTGCAGCCTTAAAACGTGAAAGTAAAAATAACAATAATAATAATGATAAGAAAATTGCATGTTTAACAAAAGAATTGGATAAAGTAAATAAAATGCCTGTTAAAGATTTAGCTTTGCATATTGATGAGGAATATGACTGGGATTTCATTGCAAATAAATTAAATCATAGACATAGTGCTCAGGAATTTAGATCTCTTTGGAAGTTATTTCTACATCCAAGTATTAATAAAAATATTTGGAGTAGAACTGAACATATGACACTACAAAAAATTGCATATGATGAAAAACTACAAAACTGGGACAAGATAGCAAAAGATTTAAATACTGGTAGAACAAACTACCAGTGTTTTGTGTATTTTCGGACCAATATGATAAATACCTTCACTGGTCGAAAGTGGACAAAAGAAGAAGAGGAATACCTTAAAAGGTTAATAGAATATTATAGAGAAGATAACTATATTCCGTGGGGTAAAGTAGCAGCTGCAATGGAAAACAGGACAAAGATTCAAATTTATAACAAATATTTTAGAATGTGTGAACATAGAAAAGGCAGATTTTTAGCAGAAGAAGATGCAGTAATATTAACTTGTTTTGAAAATTTTGGACCAAACTTTAAAAAGATGACAAAGTACCTTCCAGGTCGATCGCTTACACAATGTCGTGTTCGGTATCAAGTTTTAGCTAAAAAAAGAATATCTACAGTATGGACAGTAGAAGAAGATAGGAAACTAGTTCAGCTGATGGCAAATCAAGATTCGTCTACTAATTATTCGAGTATTGCACAATATTTTTCTGGAAAAGACAGAGTACATATAAGGGCAAGATTTAAAACATTATCAAATTGGATGAGAAGAAATCCTAATGTAGACATTGCTAAAGCGCCTAGACGTGGTGCAAGACGTTTAGGTCATGGACATTCTGCCGATGATTTGAATAGAGCTATAGAAAGCTTGAAAACTAGAATACAGTCAGAGGTGATTGATAAAAAAAGTAAGAAGGTCACAAAAGATTCACCAGAAAATGTAATAGAAGATGCTATCATAGCCCTTCTTGTCACAGAAAATGTAAAAATAGAAGAAACAAAAAAAATTCAAACCGATCAAGATGAACCAGGTACTTCAGAGGATAATTTTCAAGTTCGTACAAACAATTGTAATGTAACAAACTTGCGGAAAATACTTATATTACTGAGAGCAAAATTAAATAAAGAAAAATTTTTAAAGAGTTCCTATGGTAAAAAATATCGGGGCTTGTTAGAGCCGGATCAAGAAATGTATAGTGTAAAAATTAAGTCATATTCGAAGCAAAATTCAGAAACAAGGATAGAAATCGATGGAACTCCTGATATTTGGGGAAATGTCTGCTTAGGACCTTTGGCATATGTTCTTCCTCCACATTATTCTACAATAACTGGCTGTAAGAAATTAATGTCTTATGTTACTGCCAAACCACAAAGTGAAGATATAGTAAACATAAATGTAGTGATTAGACGAAATGTTTTGCTAAAAGTGCAGGCATTCCTTTTAATGGAGCGTTTTAATGCCTTGTTCTTGTGGCCAATGTTACTTTCAAATACACATCCAGATGTAGCTATTGCTCTTAATGAAGCAGAAAGACAATTATCTCAAAATCTTTCTGAAAATTATCCCTTATTTGATAAGGATGATTATGCTTCTGCAATGTTAATTAAGAATTGA
Protein Sequence
MSDFDMDIESDEENEIQDLEQLNAVLIDDEPCTSASASQISMSTTSFCSFSSKYEEYSKIETVLALNKMCDEKLRRLEKLLQSRLRECRQKLSNIQGIENISNDKYDKVETFRYVNCGKPYFKDKSNFPAPDNEDTILMAKSEMYDFSNIVSVPGWTIKDKSQFTALILKLSQEKRKKELHSKIAALKRESKNNNNNNDKKIACLTKELDKVNKMPVKDLALHIDEEYDWDFIANKLNHRHSAQEFRSLWKLFLHPSINKNIWSRTEHMTLQKIAYDEKLQNWDKIAKDLNTGRTNYQCFVYFRTNMINTFTGRKWTKEEEEYLKRLIEYYREDNYIPWGKVAAAMENRTKIQIYNKYFRMCEHRKGRFLAEEDAVILTCFENFGPNFKKMTKYLPGRSLTQCRVRYQVLAKKRISTVWTVEEDRKLVQLMANQDSSTNYSSIAQYFSGKDRVHIRARFKTLSNWMRRNPNVDIAKAPRRGARRLGHGHSADDLNRAIESLKTRIQSEVIDKKSKKVTKDSPENVIEDAIIALLVTENVKIEETKKIQTDQDEPGTSEDNFQVRTNNCNVTNLRKILILLRAKLNKEKFLKSSYGKKYRGLLEPDQEMYSVKIKSYSKQNSETRIEIDGTPDIWGNVCLGPLAYVLPPHYSTITGCKKLMSYVTAKPQSEDIVNINVVIRRNVLLKVQAFLLMERFNALFLWPMLLSNTHPDVAIALNEAERQLSQNLSENYPLFDKDDYASAMLIKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2