Npol010888.1
Basic Information
- Insect
- Nymphalis polychloros
- Gene Symbol
- Rel_1
- Assembly
- GCA_905220585.1
- Location
- HG992242.1:6033698-6053827[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-36 9.7e-33 114.0 0.1 1 168 57 225 57 226 0.86
Sequence Information
- Coding Sequence
- ATGTCTACAAGTGAAGCCGATATGAGTGATTCAAATTTAGATTCTCCATTTTCCCAAATGGAATCGCCTTATAGTTCTCCATCGCAACAAGTACCCCAACTGGCTAATAACATTTCGGAGTTATCATGTACAGACAAATTATACACACGTAATGGTAGGTGCCCTGAACTGCGCATTGTGGAGCAACCACAAAACCACTTTAGATTTAGATACAAAAGTGAAATGATTGGTACACATGGCTGTCTCCTCGGCAAATCATCAAATAAGTCAAAAACTCACCCAACTGTTGAGTTACGAAATTATACTGGGAAAGCTCTTTTAAGATGTCGATTGGCTCGGCATGACAAACCAGAAGAACATCCACATAAACTCCTAGAAGATGACCAGGATAGGGATGTAAGCAGTATTCTTCCAGAACATGGAAGTTACAGAGTCGCATTCAGCGGTATGGGTATAATTCATACAGCTAAGAAAGATGTACCAGCGATGTTGTACAAAAAATATGCGACAGAATCGGCGCCAGATACGCCATACAATGAAAACAAGCTCCGCGTACTGTGTGAGAACGAAGCGAAGAATATCAACTTGAATATCGTCCGGCTCAAATTCAGCGCTCATGATTTGTTGACTGACAAAGAAATTTGTCCGCCGGTGTTTTCAGAACCCATTCATAACATGAAAAGCGCAGCCACGAATGATCTGAAGATATGTCGCATCAGTCGCTGTTACGGCCGGCCAAAGGGCGGAGACGATGTCTTCATATTCGTGGAGAAAGTTAACAAAAAAAACATTAAGATCAGATTTTTCGAATTGGACGAAAACGGCGACCGCGTGTGGACCGCCGACGCGTCGTTCCCGCAGAGCGACGTGCACCACCAGTATGGCATCGTGTTCAAAACCCCGGCTTACTCAGATCCGAAAATAACATCAAACGTGAAAGTCCTCATCGAGTTGGTTAGACCGAGCGACGGGAGAACGAGTGAGCCCAGAGAGTTCACATATAAAGCGGAGTCGATATACTGTCTAACAAAGAAGAGAAAGGCTAACTCTTCCTATTCTTCCTTTGATAGTATGACAGGTTCCATTAAAAGTTTCAATGAACTACCCATCACTATAGACTATATAAATCAAAACGGGAACTACTGTACACAAGACGAGATCATGAACGAAACTCCCGCCTTCACTATCAAAGTGCCGGCGAGCGCGCCGGCGGGCGCCAGCTCGGCGGAGCTGGTGGCGGACGCCATCTGGAGCCACAGCGTGAGCGCGGGCGCCGCCCCGGCCGGCTCGGCCTTCGCGCCGCTGCTGAGCGCGCCCGCCGTGGCCGGCCCGCCCGTGCTGAGCCTGCACTCGTCGGAGATGGACCGCATCCTGGAGCGCAGCGCGGAGCCGGCGTCCGACGAGCGCCGCCGCTTCCTCGACGCCGACCTCGCCGAATACTTCCAGTACTACGATGGTACCGATATGGGCGGGCTAAGTACAATGGACTTCATTAAGTCTGGGATGCTGGTCGCTGATTCAGGAAAAATCACGAACATTAAGACGGAGGAAAATAATGTCGGTATCGTCAAAGAGGAAAATTGTAAGAATATTAAAAGGAAAACAAACATCGAATATTCCGCATTTTATAAATCAGAAGATGGAGTCGAAGTTAAAAAACTCGTCAAAGAATTATGCGAGATGATCAGAAATAAAACGGGCCTCAAGAAACAAATGGTTAGGAATAAACTGGAGCGGCTCTTTGAAATGCGACTGAGTAATGGAGATACGTTCTTACACATGACACTATGCAGCAATCAGCCTAGTCTGGAATATATCGTGAAACTTATACACAGCATGAAAATGACGAAACTATTGAATTTGAAAAACGATCAGATGCAGACCATCCTCCATCTCGCTGTCATAAACGATCTACCAAAGTTGGTAACATTCCTCGTTTCAAAAGGCTGCAATCCAATGGAGGAAGATGGCGATGGGAACAATGCCATCCACTATGCTGTCATATATCAATCATGTGTTGAACCTCTTTTGGACGCTATCAAAACCTACTCCGTCCCCAGTGATATAAATGCTTATAACAACGAGAAGCAGACGGCGCTGCACCTGGCGACCACCTACCGCTGCGCGGACAGCGTGCGCGCGCTGCGGCGGCGCGGCGCCAGCGTGCTCGCGCGCGACGCGGCGGGCCGCGCGCCGCTGCACCTCGCCGCCTACGACGCCTGGCGCGGCGCGCCTGACCTGCTGCGGCCGCTCGGCCCGCGCGCGGGGCCCGCCGACCGCAGTTACGTTGACATGGTAGATGGAAACGGCTACACGGCTCTTCAAATTATTTGTGAAGGAGAAATGAAAGAAAATACGCTCGACATAGCAAAGCATCTTTTGGAAAACAAAGCGGATCCGACTAAACACGAAGAGTACAACCAACCAGCGTGGAAACTAGCTCGCGATAAACCAGCGTTGCTCCAACTACTGCAGGCTTACATGGACCCGCGAATCATAATTGAGGATGATATCAAATCGGAGCCGGAGGACGAGTTCGAGTCGGCGGACGAGGACGAGTTCGAGCCGGCGCTGGCGGAGCTGCCGCAGTTCGTGGACGAGCTGTCGGCGGCGCTGGAGCGCGGCGCGGCGTGGCGCGAGCTGGCGCGCAGGCTGGCGCGCGACGCGCCCTCCGCGCGACACCTGCTGCTGCAGCTCCAGGAAGGTGATATTATCAGTACCAAATCTTTAGCTCTTCTTCTAGAGGACATGGGCGAAGTTGAAGCAGCCTCTATAGTAAAAAGATATGTATATTATTGA
- Protein Sequence
- MSTSEADMSDSNLDSPFSQMESPYSSPSQQVPQLANNISELSCTDKLYTRNGRCPELRIVEQPQNHFRFRYKSEMIGTHGCLLGKSSNKSKTHPTVELRNYTGKALLRCRLARHDKPEEHPHKLLEDDQDRDVSSILPEHGSYRVAFSGMGIIHTAKKDVPAMLYKKYATESAPDTPYNENKLRVLCENEAKNINLNIVRLKFSAHDLLTDKEICPPVFSEPIHNMKSAATNDLKICRISRCYGRPKGGDDVFIFVEKVNKKNIKIRFFELDENGDRVWTADASFPQSDVHHQYGIVFKTPAYSDPKITSNVKVLIELVRPSDGRTSEPREFTYKAESIYCLTKKRKANSSYSSFDSMTGSIKSFNELPITIDYINQNGNYCTQDEIMNETPAFTIKVPASAPAGASSAELVADAIWSHSVSAGAAPAGSAFAPLLSAPAVAGPPVLSLHSSEMDRILERSAEPASDERRRFLDADLAEYFQYYDGTDMGGLSTMDFIKSGMLVADSGKITNIKTEENNVGIVKEENCKNIKRKTNIEYSAFYKSEDGVEVKKLVKELCEMIRNKTGLKKQMVRNKLERLFEMRLSNGDTFLHMTLCSNQPSLEYIVKLIHSMKMTKLLNLKNDQMQTILHLAVINDLPKLVTFLVSKGCNPMEEDGDGNNAIHYAVIYQSCVEPLLDAIKTYSVPSDINAYNNEKQTALHLATTYRCADSVRALRRRGASVLARDAAGRAPLHLAAYDAWRGAPDLLRPLGPRAGPADRSYVDMVDGNGYTALQIICEGEMKENTLDIAKHLLENKADPTKHEEYNQPAWKLARDKPALLQLLQAYMDPRIIIEDDIKSEPEDEFESADEDEFEPALAELPQFVDELSAALERGAAWRELARRLARDAPSARHLLLQLQEGDIISTKSLALLLEDMGEVEAASIVKRYVYY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01506937; iTF_01506113; iTF_01080502; iTF_01078846;
- 90% Identity
- iTF_01080502; iTF_01078846;
- 80% Identity
- -