Nio009438.1
Basic Information
- Insect
- Nymphalis io
- Gene Symbol
- Btbd3
- Assembly
- GCA_905147045.1
- Location
- LR989914.1:7022386-7025445[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-26 1.1e-23 84.0 0.0 4 109 111 217 109 218 0.94 2 2 3.2 1.3e+03 0.1 0.0 77 108 217 248 215 250 0.83
Sequence Information
- Coding Sequence
- ATGTCCAATTTGTGTTCAAGAATAGTTTTAAAACCTGCGAAAAGGTTAACTGAAGGTAGAGATAGCATGTCAGTCGCTCAAACGAATACTTGGATGAATGCCGAAAACATCAACAATGGAGGTGGTTTATCCCTATCACCCCCTCATACAATATCTCAACGTGAGACGGGAACGCAAGTTTCCCAGTGCTACAGTGGACCGCCTTCTCCATGTGGATCGACAAGTTCAACAACGTCACCAACTGTATCACCAGCACCTCCCCCTGGGACTGCAACCCTCGACCCGAACTGGCAAGCTACCAAACCCACAGTCAGAGAGAGAAATGCGGCAATGTTTAATAATCAATTAATGGCTGATATCACATTTGTTGTTGGAGGATCAGGTCACACACAAGTTATACCTGCGCATAAATATGTTCTGGCAACTGGTAGCTCAGTATTTTACGCTATGTTCTATGGTGGTCTAGCAGAATGCAAACAGGAAATAGAAGTACCTGATGTTGAACCCTCAGCATTCCTAACATTACTAAAGTATTTATATTGTGATGAAATTCAATTAGAAGCTGATACAGTGCTGTCAACACTATATGTTGCAAAAAAATACATTGTTCCACATCTTGCGAGAGCCTGTGTTAATTATTTGGAAACTAGTCTAACGGCAAAAAATGCCTGTTTGCTGTTAAGCCAATCTCGTCTATTTGAAGAACCAGAACTTATGCAAAGGTGTTGGGAAGTTATTGATGCACAGGCTGAGATGGCTCTTACATCTGAAGGTTTTGTCGACATTGACGTATCTACTTTAGAATCAGTATTGGCAAGAGAGACACTTAATTGCAAGGAAATAAATTTGTTTGAAGCTGCTTTAGCATGGGCTCATGGTGAATGCGTCAGAAGAGAAATAGATGTGACACCAGCAAACAAAAGAGCTATGCTTGGAAGTGCCATTTATTTGATCAGATTCCCAACCATGACTTTGGAAGAATTTGCAAACAGTGCAGCACAGTTGGGCATTCTAACACCTCAAGAGACTATTGACATTTTTTTACATTTTACTGCCTCAAGTAAACCATTACTCTCTTATCCTGTAAAGGCTAGAACTGGACTTAAAGCTCAGATTTGCCACAGATTCCAGTCTTGTGCATACAGAAGTAATCAATGGCGATATAGAGGCCGCTGTGACTCAATCCAGTTTTGTGTTGACAAAAGAATATTTGTTGTTGGATTTGGGCTTTATGGCTCATCAAATGGTGCTGCTGACTACAATGTCAAGATTGAATTAAAACGGTTAGGAAGAGTATTAGCTGAAAATAATACCAAATTCTTCTCGGATGGCTCAAGTAACACTTTCCATGTATACTTTGAAAATCCAATCCAAATTGAGCCAGAATGCTTTTACACTGCTTCGGCAATACTTGATGGGAGTGAATTGAGTTACTTTGGACAAGAAGGTTTGAGTGAAGTTTATATGGGAACTGTTACATTCCAATTTCACTGTTCATCTGAGAGTACAAATGGGACAGGAGTACAAGGTGGTCAGATTCCTGAACTTATTTACTATGGTCCAACTGTAAACACAACAATGGCCAATACAAACACCAATGAGGACTGA
- Protein Sequence
- MSNLCSRIVLKPAKRLTEGRDSMSVAQTNTWMNAENINNGGGLSLSPPHTISQRETGTQVSQCYSGPPSPCGSTSSTTSPTVSPAPPPGTATLDPNWQATKPTVRERNAAMFNNQLMADITFVVGGSGHTQVIPAHKYVLATGSSVFYAMFYGGLAECKQEIEVPDVEPSAFLTLLKYLYCDEIQLEADTVLSTLYVAKKYIVPHLARACVNYLETSLTAKNACLLLSQSRLFEEPELMQRCWEVIDAQAEMALTSEGFVDIDVSTLESVLARETLNCKEINLFEAALAWAHGECVRREIDVTPANKRAMLGSAIYLIRFPTMTLEEFANSAAQLGILTPQETIDIFLHFTASSKPLLSYPVKARTGLKAQICHRFQSCAYRSNQWRYRGRCDSIQFCVDKRIFVVGFGLYGSSNGAADYNVKIELKRLGRVLAENNTKFFSDGSSNTFHVYFENPIQIEPECFYTASAILDGSELSYFGQEGLSEVYMGTVTFQFHCSSESTNGTGVQGGQIPELIYYGPTVNTTMANTNTNED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01157971;
- 90% Identity
- iTF_01083492; iTF_01416973; iTF_00007249; iTF_01416018; iTF_00072212; iTF_00761814; iTF_01251967; iTF_00077633; iTF_01337005; iTF_01403577; iTF_00458177; iTF_00159976; iTF_00276579; iTF_00457347; iTF_01151331; iTF_00954694; iTF_01018700; iTF_00953679; iTF_00354293; iTF_00802039; iTF_01021431; iTF_01092184; iTF_00642491; iTF_01017852; iTF_00353278; iTF_00205312; iTF_00319046; iTF_00689510; iTF_01033862; iTF_00959522; iTF_01034725; iTF_00958766; iTF_00842799; iTF_00960281; iTF_00986369; iTF_00985281; iTF_00695813; iTF_00824886; iTF_00408580; iTF_00208039; iTF_00209006; iTF_00994471; iTF_01316499; iTF_00450297; iTF_01080021; iTF_01452486; iTF_01148199; iTF_01142498; iTF_01146407; iTF_01141033; iTF_01144658; iTF_01149714; iTF_01145367; iTF_01141790; iTF_01147488; iTF_00197474; iTF_00421479; iTF_00420654; iTF_00419856; iTF_00419090; iTF_01148936; iTF_00204462; iTF_01140309; iTF_00115063; iTF_01337848; iTF_00958060; iTF_01143936; iTF_00279242; iTF_00323626; iTF_01569482; iTF_01246063; iTF_00256075; iTF_00257066; iTF_00650155; iTF_00248237; iTF_00723268; iTF_00247334; iTF_00212679; iTF_01385933; iTF_01386854; iTF_01341449; iTF_01387733; iTF_01388630; iTF_00448270; iTF_01401422; iTF_01495150; iTF_00026991; iTF_00027900; iTF_00125231; iTF_00321709; iTF_01170711; iTF_01508194; iTF_01506485; iTF_00649252; iTF_00250597; iTF_01444037; iTF_00355335; iTF_00356431; iTF_01078344; iTF_00858700; iTF_01173409; iTF_00913741; iTF_01090925; iTF_00935854; iTF_01080846; iTF_00055568; iTF_00035860; iTF_00034913; iTF_00284680; iTF_00382804; iTF_01368247; iTF_01209434; iTF_01437210; iTF_01335131; iTF_00926748; iTF_01081724; iTF_00407709; iTF_00406874; iTF_00724061; iTF_00896061; iTF_00634624; iTF_00150767; iTF_00705158; iTF_00178349; iTF_00361759; iTF_01501283; iTF_00942957; iTF_01426037; iTF_00948022; iTF_00275447; iTF_01509719; iTF_00075674; iTF_00844508; iTF_01495888; iTF_01115819; iTF_01179601; iTF_01180420; iTF_01342341; iTF_00282556; iTF_00050077; iTF_01282484; iTF_00897008; iTF_01561237; iTF_01130137; iTF_00923834; iTF_01176283; iTF_01155498; iTF_01143214; iTF_01157971; iTF_01159539; iTF_00180601; iTF_00249818; iTF_01156764; iTF_01281468; iTF_00778109; iTF_00778850; iTF_00776804; iTF_00780358; iTF_00779608; iTF_00777457; iTF_00776124; iTF_01494429; iTF_01402818; iTF_00461696;
- 80% Identity
- -