Nio006720.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nymphalis io
Gene Symbol
Hr39
Assembly
GCA_905147045.1
Location
LR989897.1:2825540-2860932[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.48 6.2e+03 -3.3 2.7 115 153 171 205 53 245 0.40
2 4 2 2.6e+04 -7.5 10.3 76 162 220 312 167 364 0.48
3 4 2.8e-08 0.00036 20.6 0.1 1 21 445 465 445 478 0.91
4 4 4e-65 5.1e-61 207.8 0.0 156 408 502 763 474 763 0.83

Sequence Information

Coding Sequence
ATGAATACCGCGATGTCGAGCGACGAGGCGGTAAAGGTGGAAGGGGGACATGTCTCCGTCACAACAATCAGCATGTCTGGTCCAGAAACTAGCAACGGTCAGTTCTCCTACAGCTCGAGCGGAGTACGCATCAGCGTGTCTTCAGAACCTCACGATGAGGATTCTACTGATGCTGAAATCTCCAAAATCGATTTCACGCAACATCAATACGAGGTGAACATGAGAAACAAAAAGAAGCGTTCCTCAAGCGGACAGTGCGAACAGAATGCAGAACAAGAACGGCCTATGTCCTGGGAAGGGGAACTCTCCGACTCTGAAATGGTTATTGATACCAGTGTCAACAATGATGAAAACAGCAGCTCTCTCGACTTGCAATCCTCGCGGGACTCCATCGACACTCTTCGAAACGTGACCATTAAGACTGAGAAACTCAGAGAAGACCCTCTCAAACTAGAAGCGTTTCAGAGCTTGGACGATCAACGAGTTCTGGACCTCAAATACAGCGTCCCCTTGCAATCGCACCAGCGGAGCCTCAGCATGAACAGGATATCAGTGTTAACGGATAATACGTCTCTATCCCTCGCGAGACGACCGTCGTCGCCGACAAGCAGTGCTAAATCGACCATGTCTGATCACTACGACACGACGCAACTAATGCACAATCCTGTCGCAGAAGTCCAGAACTTGACTATCAAAAAGGAAACCCAATTGTCTGAACTAAAATGCGAACCAACAGTGGGTATGGACAAGTTATTAGGTCTCCACGGTTCGCCGTTGTTAGGTAGACTGCCTCGGGTTCAATCGAGTGCCAGTACGGATTCCGCCGTACATTCTATGTACACACATAGTGTATACAGTAGTCCTTCAGCTAGTCCTCGTCCGTCTCGTCACTACACGCCGTCTCTTTCTCGCAATAACAGCGATGCATCACACTCATCGTGTTACTCATACAGTTCCGAGTTCTCACCTACTCATTCGCCAGTTCAGGGCCGACATCCTCACGTTGTGTACCGCGAGGCGACAGTCTTCCCCGCCTCGCCCGCGCATGACGAAGATACGGATACAACTGATGAACGCCTTCATCATCATCAGGGTATTAGCAGACAACAGCTGATTAACAGTCCGTGTCCAATTTGCGGTGACAAGATAAGCGGTTTCCATTACGGAATATTCTCCTGTGAATCTTGCAAGGGATTCTTCAAGCGGACCGTACAAAACCGGAAGAACTACATGTGTCTTCGCGGTGGGAACTGTCCCGTCACTGTTGCCACGAGGAAAAAGTGCCCTGCCTGCAGATTCGACAAGTGCTTGGGATGTGGAATGAAGCTCGAAGCGATCAGAGAAGACCGCACGCGCGGCGGGCGCTCCACGTATCAGTGCTCGTACACGCTGTCGGGCGCGGCGTCCACGGGCTCGCTGCTGTCCGCGCACGCGCCCACCACGCTGCGACACGCCTCCAGCCTCACTTGCGTAAATGGCCCGGGATCGTACACCAGTCGAGGAGAATCGAGCAACAGCCGACTCACGCCCGACATACCGCCGTTATTACAGGAAATAATGGACGTGGAACATTTATGGCAATACAACGAGTCGGAGCTCAGCAGGATGAGTAAGTCGACGGGCAGCCCGTCCGCCAACCCGCTGCTGGCGGCCAGCGGCATCACGGCGCAGAACTCCAGCGCCGACTTCCTTGCCGACCTCTGCAACATCGCGGACCACAGGCTCTACAAGATCGTCAAGTGGTGCAAGAGTTTGCCGCTCTTTAAAAATATTTCGATCGACGACCAGATCTGCCTGCTAATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTACCGCGGCGTCAGCACGCCGGGCGAGGTGCGCGTGGGCGGCGGCCGCGGGATCACGCTGCACCAGAGCGCCAAATACGGCTTGACACCATGCATAGAACGAATGCTTAGTTTCACAGACCACTTGAGGAGGTTACGAGTGGACCGATATGAATACGTCGCGCTCAAAGTTATTGTACTACTCACTTCAGACGCACCAGAATTGCGTGAAGCGGAAAAAGTGCGAGCATCCCAAGAAAAAGCGCTGGCAGCGCTGCAAGCGTACACAGCGACGCATTCGCCTGATACGCCCGCTAAGTTCGGCGAACTGCTTCTGCGTATACCCGAGTTACAAAGGACTTGCCAGTTTTTCATGCAAGTCGGAAAGGAAATGCTTAACCCGGCTAATAAGGGCAAGGACGGTGAAGGTCCAAGCTTCAATCTCCTTATGGAACTTTTAAGAGGCGACCATTGA
Protein Sequence
MNTAMSSDEAVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSEPHDEDSTDAEISKIDFTQHQYEVNMRNKKKRSSSGQCEQNAEQERPMSWEGELSDSEMVIDTSVNNDENSSSLDLQSSRDSIDTLRNVTIKTEKLREDPLKLEAFQSLDDQRVLDLKYSVPLQSHQRSLSMNRISVLTDNTSLSLARRPSSPTSSAKSTMSDHYDTTQLMHNPVAEVQNLTIKKETQLSELKCEPTVGMDKLLGLHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRPSRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVVYREATVFPASPAHDEDTDTTDERLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYTLSGAASTGSLLSAHAPTTLRHASSLTCVNGPGSYTSRGESSNSRLTPDIPPLLQEIMDVEHLWQYNESELSRMSKSTGSPSANPLLAASGITAQNSSADFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHQSAKYGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTATHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKGKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00985246;
90% Identity
iTF_01018623;
80% Identity
iTF_01079145;