g9445.t1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nymphalis c-album
Gene Symbol
ZNF296
Assembly
GCA_905332345.1
Location
CAJOBY010000016.1:190844-199621[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.012 0.91 10.6 2.1 3 23 138 158 136 158 0.96
2 14 0.0017 0.13 13.3 2.8 1 23 268 290 268 290 0.99
3 14 6e-05 0.0045 17.8 0.6 1 23 296 319 296 319 0.96
4 14 0.029 2.2 9.3 4.7 1 23 324 347 324 347 0.94
5 14 1.1e-05 0.00085 20.1 0.2 2 23 453 474 453 474 0.98
6 14 0.0002 0.015 16.2 0.8 1 23 480 502 480 502 0.99
7 14 0.24 18 6.5 4.9 1 23 563 585 563 585 0.96
8 14 0.0017 0.13 13.2 1.3 1 23 620 642 620 642 0.95
9 14 0.00017 0.013 16.4 1.8 1 23 648 670 648 670 0.97
10 14 0.0005 0.038 14.9 2.1 1 23 679 701 679 701 0.98
11 14 0.00034 0.026 15.4 0.6 2 23 748 769 748 769 0.97
12 14 0.029 2.2 9.4 5.9 1 23 786 808 786 808 0.95
13 14 1.4e-06 0.00011 22.9 0.7 1 23 814 836 814 836 0.98
14 14 4.9e-07 3.7e-05 24.4 3.1 1 23 842 865 842 865 0.98

Sequence Information

Coding Sequence
ATGAATGAAAACATGGCGCCGGAAGTGGATCCATTGAGCAATTATGGCATAAATCCATTCCACAATTTTGAGGGTTACGAAAATTTACCGTACACTGAAAACGTAGTACCCTACACGTATCCCGTTAAAGTAGAGCAATACCAAAATACGTTTAACTATTACAATTCGCCGAATACTAGTGAAAATAAGCACAACACACCAGAAAAAACCAATAGCGTGGCtccaaataataatagcaaGAATGAACGGATTAATCCAATCATGAACGACACTTTAACGActaatgaaaacaaaacagACATTGATATAAAGCCAGATATAACAGGAAGCATAAATAAGAGAAGAATTAAAAAGGAAAGAAGCAAATATTTCTCCGAGAAAATAACGGAAAAAGATTTTCCCTTCTACGGGTGCTCCGTctgtaatatatgttttaaatcatTACACGAACTAGACACACACGTTACAATACACAAAGATAGAATAACTAGTTACGATCTGAGAATAaagaatcaattaaaaaaaaggaaattaaagaaagagatgaagaaaaataaaaagaagaaaaagaatgTCGTGAAATTGGAAGCTGATATAGATATTGAAATCAAACCGGAAGACGGGTACATTGGAAATGAAAAGGCATCAGACTTGATCAACAGTACGGAATCGGATAACCAAAGCTCGAAGGAAAATGAGAATGGAGTGATTAATGAGAAGAAAAATGATATTGTTGCAACGACGGATTCCAGTAACAGAGAACCAATGAATAAAAAAGAGATGCAAGATCTACAAAAGATATACAAATGTTTTGCATGTCAGAAACAGTTTACGttgagttattatttaaagttacacGTCAGATCACATACagATGAAAAGCCGTATACGTGCGCTGAATGCGGCCAGTCCTTCATCACGGCCAGCAAGCTGGGGCGACACAATAAGAGATTCCATCTCGCGATCCGATACCAGTGTCGGATATGTTATAGATATTTCTCGagATTCGAATTCCTGACACGCCATTTTGATAAGAAGCATCCAGACGATAAATTGGAAGGGGAACCGTACGATTACAATGCCATATTGCCATATTTAAAAGAACTAGAGGAACAGCTGCGTGAAAAGTCTGAGAGCGAAAAGTCTAAACCGAAATCTGAGGATTTGTGGTCGAGCGAGTGGCCGAATATGGGGAGAAGTGGTGATTTGAAGGACGATTTAGTTAAAGAAGAAGAGAAGGAACTAAAGATTGAAGAGGTGAAGGTCGATATGGATGAAGTTGATGTGAAACAAGAGGCGGAGTTTGAGGAGAAAAACGAGGATCTAGACGACTTCAGGGACGATTTGAAAGATGAgaaGTGCGGCGAGTGCGGCAAGCGCGTGAGCAGCGCGTCGTACCTGCGCGTGCACGCGCGCACGCACAGCGGCGAGCGCCCCTACAAGTGCTACGTGTGCGGCGCGGGGTTCATCACCGCCAGCAAGATGCACCGGCACGTGCTCACGCACCCGCAGTGCTGGGACGATGACGAAGTGAAGACGGAGAACTTAGACATAAAGGTGGAACCGCTGAAAGATGGTGAAGTCATTGATGATAAGAAGAAattaaaaatgaaaaaggcGCTCGCGAAATTCACGAAAAAACCAAGGAGTTCGGATAAGAAGAAGAAGCTATATCAGAGGCGACCACATGCTTGCGAGTTCTGTCAAAAGAGATTTCTGCACCTGGAGACGCTGCAGGTACATAAGAAATCCCACGAAGGCGAGTCGATAGTGTACAAGTGCACGTTCTGTCTCGACGAGCAGCAGGACGAGGCGGCGCTGCGGGCGCACGAGGCGACGCACGGCGGACCGAAGCCCTACCTGTGCACCATCTGCGGGAAGGGCTACAAGAAGCGGGAGACGATGATATACCACAGGAAGAACCACAAACCGGAGAGGGAGTACATCTGCGACATCTGCACGAAGAGCTTCAACGCGCAGTGCAAGCTGCAGCGGCACATCGTCAGCCACCGCGCCGACCGGTTCGTGCTGCGCTACGAGTGCCCCGTGTGCGCGCACATGTTCAACACCAAGTACCACGTGCAGATGCACCTCGCCACGCACCAGAAGGAGGGCCTGATCCAAGAGGAGAATCGCAACGAGATCCTGGCGATGGTGTTACAAAACGCTCGTAAGATACCGAAAACGCCGGACGCGCCGTCCGCCCTCACCGACATCGTGCCGGCCGACGAGCGGAGCCGAGTGTGCAACATATGCGGGGAGATATTCCAGCACTTCTATTACCTGGAGGAGCATCTGAAGAGCCACGGCTCGAAAATAGCCATAGAAGATAATGAAACGGCTAAGGAAAAGaaacatatatgtaaaatatgcaataaaggctttaaacttcattattatttaaaattacatagttTTACTCATACAAAAGAGAAGCCATTCATTTGTCAACAGTGTGGGAAGGGCTTTATTACCAAAGGTAAGTTGAAAAGACATTTAGAGACTCACACGGGATTGAAAAAGTACCAGTgtcatatttgttataaattcttCACAAGGCCCAGTTATCTAAGGATTCATGTTAGGACGATACATGGTACACAGGATTATAATTTTAGACTAGAAAAACAGTATGGGTTGTCGTCTGTACCACTCATGGGGCACTCCGCTTGA
Protein Sequence
MNENMAPEVDPLSNYGINPFHNFEGYENLPYTENVVPYTYPVKVEQYQNTFNYYNSPNTSENKHNTPEKTNSVAPNNNSKNERINPIMNDTLTTNENKTDIDIKPDITGSINKRRIKKERSKYFSEKITEKDFPFYGCSVCNICFKSLHELDTHVTIHKDRITSYDLRIKNQLKKRKLKKEMKKNKKKKKNVVKLEADIDIEIKPEDGYIGNEKASDLINSTESDNQSSKENENGVINEKKNDIVATTDSSNREPMNKKEMQDLQKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCAECGQSFITASKLGRHNKRFHLAIRYQCRICYRYFSRFEFLTRHFDKKHPDDKLEGEPYDYNAILPYLKELEEQLREKSESEKSKPKSEDLWSSEWPNMGRSGDLKDDLVKEEEKELKIEEVKVDMDEVDVKQEAEFEEKNEDLDDFRDDLKDEKCGECGKRVSSASYLRVHARTHSGERPYKCYVCGAGFITASKMHRHVLTHPQCWDDDEVKTENLDIKVEPLKDGEVIDDKKKLKMKKALAKFTKKPRSSDKKKKLYQRRPHACEFCQKRFLHLETLQVHKKSHEGESIVYKCTFCLDEQQDEAALRAHEATHGGPKPYLCTICGKGYKKRETMIYHRKNHKPEREYICDICTKSFNAQCKLQRHIVSHRADRFVLRYECPVCAHMFNTKYHVQMHLATHQKEGLIQEENRNEILAMVLQNARKIPKTPDAPSALTDIVPADERSRVCNICGEIFQHFYYLEEHLKSHGSKIAIEDNETAKEKKHICKICNKGFKLHYYLKLHSFTHTKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRLEKQYGLSSVPLMGHSA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00843735;
90% Identity
iTF_01080097;
80% Identity
-