g13742.t2
Basic Information
- Insect
- Nymphalis c-album
- Gene Symbol
- kn
- Assembly
- GCA_905332345.1
- Location
- CAJOBY010000025.1:2727647-2742580[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.8e-143 3.9e-139 465.1 0.0 181 387 58 282 49 286 0.98 2 3 0.00014 0.71 8.6 0.1 420 454 291 327 283 331 0.80 3 3 0.024 1.2e+02 1.2 0.0 484 563 329 403 324 414 0.76
Sequence Information
- Coding Sequence
- ATGATAATCGTTGTTATTGTTCTCTATTTACGGCTCAGAAACGGGAACAAGTTAACCCTTGAATTCCTACGTACTGAAATATTAACGCTCGCTATAGGCGCACGCGGAAAAACAAAGTCGAAAACTGGGTCCGTTATGGGCCCGTCGCACGTAACCAAAGATTATTTGCCTGCACGattttttctaaaattcttTCTGAAATGCAACCAAAATTGCTTGAAAAACGCCGGCAACCCGCGCGACATGAGAAGGTTTCAAGTGGTGATATCAACTCAAGTCATGGTCGACGGTCCCCTGTTGGCGATATCGGACAACATGTTCGTTCACAACAACAGTAAACACGGGAGACGAGCGAAGCGACTCGATCCGTCTGAAGGTATTGACGCCGCGCCCGAGCCTAATTCGGGGCTATACCCACCGTTGCCTGTAGCAACGCCATGCATCAAAGCAATATCTCCGAGCGAAGGCTGGACGTCAGGGGGTTCTACGGTCATAATAGTAGGGGATAACTTTTTCGATGGACTCCAAGTCGTATTCGGAACTATGTTAGTTTGGAGCGAGCTAATAACGTCACACGCGATTCGAGTGCAAACACCGCCGCGTCATATACCAGGCGTGGTGGAAGTTACTCTTTCGTACAAGAGCAAGCAGTTCTGTAAGGGAGCGCCTGGAAGATTCGTTTATGTTtCAGCTCTCAACGAGCCGACAATAGATTACGGCTTCCAGAGACTACAGAAACTTATACCGAGACATCCGGGCGATCCTGAAAAACTGCCCAAGgaaataatacTGAAGCGAGCGGCAGATTTAGCGGAGGCTTTGTATTCTATGCCCCGTAACAACCAACTAGGGCTTGGGGCGCCGCGCTCGCCGCCCGCCAGTATGCCCTTCAATTCCTACACGGGGCAGCTTGCTGTCAGTGTACAGGACACTGCCGCATCGCAGTGGACTGAAGAGGAGTACGCGCGCAGCGGCGGCTCGGACCACAATACGATGTCTCTAGGACCGTACCATCCGGCGAACATGAACGGACATATAACGTCTGAACACTATAACGTGTATAATACGAAAGATAGCGACTATTACGCTGAAAGGAATGGCGAGTGTAAGAATGAATGTACAGTAAACACTCATACGAAATGCAGTGAACTTGGCAAAGGGAAACCTCGCAGTGCGTTCGCAGTCGTCAGAAATAGTCCACCGCGTAATTTACAACATCAAAATTGGCAACATCTCGCCGTCCAGTGTtag
- Protein Sequence
- MIIVVIVLYLRLRNGNKLTLEFLRTEILTLAIGARGKTKSKTGSVMGPSHVTKDYLPARFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGIDAAPEPNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSDHNTMSLGPYHPANMNGHITSEHYNVYNTKDSDYYAERNGECKNECTVNTHTKCSELGKGKPRSAFAVVRNSPPRNLQHQNWQHLAVQC*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00984815;
- 90% Identity
- iTF_01077970;
- 80% Identity
- -