g13742.t3
Basic Information
- Insect
- Nymphalis c-album
- Gene Symbol
- kn
- Assembly
- GCA_905332345.1
- Location
- CAJOBY010000025.1:2727647-2742580[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.1e-144 4e-140 468.3 0.0 181 387 58 281 37 284 0.98 2 3 8.4e-05 0.42 9.3 0.1 420 454 290 326 282 355 0.78 3 3 0.024 1.2e+02 1.2 0.0 484 563 328 402 323 413 0.76
Sequence Information
- Coding Sequence
- ATGATAATCGTTGTTATTGTTCTCTATTTACGGCTCAGAAACGGGAACAAGTTAACCCTTGAATTCCTACGTACTGAAATATTAACGCTCGCTATAGGCGCACGCGGAAAAACAAAGTCGAAAACTGGGTCCGTTATGGGCCCGTCGCACGTAACCAAAGATTATTTGCCTGCACGattttttctaaaattcttTCTGAAATGCAACCAAAATTGCTTGAAAAACGCCGGCAACCCGCGCGACATGAGAAGGTTTCAAGTGGTGATATCAACTCAAGTCATGGTCGACGGTCCCCTGTTGGCGATATCGGACAACATGTTCGTTCACAACAACAGTAAACACGGGAGACGAGCGAAGCGACTCGATCCGTCTGAAGGTATTGACGCCGCGCCCGAGCCTAATTCGGGGCTATACCCACCGTTGCCTGTAGCAACGCCATGCATCAAAGCAATATCTCCGAGCGAAGGCTGGACGTCAGGGGGTTCTACGGTCATAATAGTAGGGGATAACTTTTTCGATGGACTCCAAGTCGTATTCGGAACTATGTTAGTTTGGAGCGAGCTAATAACGTCACACGCGATTCGAGTGCAAACACCGCCGCGTCATATACCAGGCGTGGTGGAAGTTACTCTTTCGTACAAGAGCAAGCAGTTCTGTAAGGGAGCGCCTGGAAGATTCGTTTATGTTtCTCTCAACGAGCCGACAATAGATTACGGCTTCCAGAGACTACAGAAACTTATACCGAGACATCCGGGCGATCCTGAAAAACTGCCCAAGgaaataatacTGAAGCGAGCGGCAGATTTAGCGGAGGCTTTGTATTCTATGCCCCGTAACAACCAACTAGGGCTTGGGGCGCCGCGCTCGCCGCCCGCCAGTATGCCCTTCAATTCCTACACGGGGCAGCTTGCTGTCAGTGTACAGGACACTGCCGCATCGCAGTGGACTGAAGAGGAGTACGCGCGCAGCGGCGGCTCGGACCACAATACGATGTCTCTAGGACCGTACCATCCGGCGAACATGAACGGACATATAACGTCTGAACACTATAACGTGTATAATACGAAAGATAGCGACTATTACGCTGAAAGGAATGGCGAGTGTAAGAATGAATGTACAGTAAACACTCATACGAAATGCAGTGAACTTGGCAAAGGGAAACCTCGCAGTGCGTTCGCAGTCGTCAGAAATAGTCCACCGCGTAATTTACAACATCAAAATTGGCAACATCTCGCCGTCCAGTGTtag
- Protein Sequence
- MIIVVIVLYLRLRNGNKLTLEFLRTEILTLAIGARGKTKSKTGSVMGPSHVTKDYLPARFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGIDAAPEPNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSDHNTMSLGPYHPANMNGHITSEHYNVYNTKDSDYYAERNGECKNECTVNTHTKCSELGKGKPRSAFAVVRNSPPRNLQHQNWQHLAVQC*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00984815;
- 90% Identity
- iTF_01077971;
- 80% Identity
- -