g20138.t1
Basic Information
- Insect
- Nymphalis c-album
- Gene Symbol
- dl
- Assembly
- GCA_905332345.1
- Location
- CAJOBY010007723.1:1-2204[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-13 1.6e-09 38.4 0.0 126 169 4 48 2 48 0.92 2 2 2.5 1.6e+04 -3.8 0.0 33 49 318 334 316 347 0.79
Sequence Information
- Coding Sequence
- NCGGGCTACAGTCATCGGAATCAACCTCAAAGCATCGACCTAAACGCAGTGAGACTTTGCTTCCAAGTCTTCATCCACGACGAAAGGAGCGGGAAGATACGACTCTCGCTGCCTCCCGTGGTCTCGGACGTCATCTACGACAAGAAGGCTATGAGCGACCTCGTCATCATGCGACTCAGCCAGTGCTCCGATTTCCATAAAGGAGGAGCTGAACTGATACTACTCTGTGAAAAGGTGACGCGCGAGGACATCGCCGTGGTGTTCTTCCAGAAGGAGGGCGAGCACGTGGTGTGGGAGGAGAGCGCCAACATCGTGCTCGTGCACCGCCAGGTCGCCATCGCCTTCCACACGCCGCCCTACCGCGACCCCAGCGAGCGGCGCCACGTGCAGGTATACCTCCAGCTGAAGAGGACATCAGACAACGCCAGAAGCAACGCCGTACCCTTCGAATACATCCCCGAATACCAAGGTATTGCGAGAAAACCTCTCCCGGATCTAAGCGTATTCTCTCTTCTCTTGACAGAACCCCCTTCCCCCGCACAGCCCACCGATGGAAATAACAATACGCCCCCCGAAAAGCAAGATCTCGTATCTTCCACCAGCGATTCCCCAGATCCTCCAACAGTCGAAGTGACCGACGTTATCGAAAGCCCCGACATCGTCGAAACCACCGACGTCATGGTGGTCGACAACGACGACGTCACAGTGGTCGAAACGAACGGCGTCACGAACGTCCACACCGACGACGTCATGGCGGTCGACACCAACGAGAAGTGTCTGAACGATCTCCTCGATCAGGTCGCGGAACTGGACGAGATATACTCGGAGAATCGAACTCGACTCGAAAACGTCACGATACTCAACGACGAGACCGACATCGACGAGTTCAACGACGCGGGCACGTACACCAGCCTGCAGCTCGCCTTCAAGAACCCGATACCGATCTCCGAGCCGGAGGCCGAGCCCTACGAGGACGTCCAGGTGCAGACCTACCGCGGCCCGATCATAGAGTTCACCCCCCTCAAGCGCGACACCGAGGAGGAGAGGGCGCCGCCGCTGCCCCCCAAGCGCGTCCGCAAGACCACCGAGAACTTCAAGACGAGCCAGACGTCCGTCAACAGCATCCTCCGGCCCGGCAAGCAGATCCCCATCTCGCGCGCCGGCGACCTCGCCGTGGCGCGCTCCGAGCCC
- Protein Sequence
- XGYSHRNQPQSIDLNAVRLCFQVFIHDERSGKIRLSLPPVVSDVIYDKKAMSDLVIMRLSQCSDFHKGGAELILLCEKVTREDIAVVFFQKEGEHVVWEESANIVLVHRQVAIAFHTPPYRDPSERRHVQVYLQLKRTSDNARSNAVPFEYIPEYQGIARKPLPDLSVFSLLLTEPPSPAQPTDGNNNTPPEKQDLVSSTSDSPDPPTVEVTDVIESPDIVETTDVMVVDNDDVTVVETNGVTNVHTDDVMAVDTNEKCLNDLLDQVAELDEIYSENRTRLENVTILNDETDIDEFNDAGTYTSLQLAFKNPIPISEPEAEPYEDVQVQTYRGPIIEFTPLKRDTEEERAPPLPPKRVRKTTENFKTSQTSVNSILRPGKQIPISRAGDLAVARSEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -