Basic Information

Insect: Nylanderia fulva
Gene Symbol: ZNF236
Assembly: GCA_005281655.1
Location: NW:3617006-3632008[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00012 0.0092 16.1 1.6 2 23 186 207 185 207 0.96

2 26 0.00026 0.021 15.0 0.3 1 23 213 235 213 235 0.98

3 26 2.7e-05 0.0021 18.1 0.3 2 23 241 262 241 262 0.97

4 26 0.0062 0.5 10.6 0.2 3 23 270 290 268 290 0.96

5 26 6.1e-05 0.0049 17.0 1.1 2 23 303 324 303 324 0.98

6 26 2.3e-06 0.00019 21.4 1.1 1 23 345 367 345 367 0.99

7 26 1.7e-05 0.0014 18.7 0.3 1 19 373 391 373 392 0.97

8 26 1.1e-05 0.0009 19.3 1.2 1 23 401 424 401 424 0.96

9 26 0.0025 0.2 11.9 1.5 1 23 433 456 433 456 0.97

10 26 3.6e-07 2.9e-05 24.0 0.4 1 23 579 601 579 601 0.98

11 26 0.00051 0.041 14.1 0.8 1 23 607 629 607 629 0.99

12 26 0.065 5.2 7.4 4.5 1 23 635 657 635 657 0.97

13 26 1.3 1e+02 3.4 0.8 1 13 661 673 661 680 0.79

14 26 0.0017 0.13 12.4 5.6 1 23 737 759 737 759 0.97

15 26 3e-05 0.0024 18.0 4.9 1 23 765 787 765 787 0.99

16 26 2.1e-06 0.00016 21.6 1.3 1 23 793 815 793 815 0.98

17 26 0.00094 0.075 13.2 8.2 1 23 821 843 821 843 0.98

18 26 0.1 8.3 6.8 3.0 2 23 1193 1214 1192 1214 0.97

19 26 3.8e-06 0.00031 20.8 0.7 1 23 1220 1243 1220 1243 0.98

20 26 2.6e-08 2.1e-06 27.6 1.4 2 23 1341 1362 1340 1362 0.98

21 26 2.6e-05 0.0021 18.1 3.2 1 23 1368 1390 1368 1390 0.99

22 26 0.00011 0.0085 16.2 4.1 1 23 1396 1418 1396 1418 0.97

23 26 2.6e-05 0.0021 18.1 3.4 1 23 1424 1446 1424 1446 0.99

24 26 2.4e-06 0.00019 21.4 0.8 2 23 1691 1712 1690 1712 0.97

25 26 1.6e-05 0.0013 18.8 4.6 1 23 1718 1740 1718 1740 0.98

26 26 8.3e-06 0.00066 19.7 5.5 1 23 1746 1769 1746 1769 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00012	0.0092	16.1	1.6	2	23	186	207	185	207	0.96
2	26	0.00026	0.021	15.0	0.3	1	23	213	235	213	235	0.98
3	26	2.7e-05	0.0021	18.1	0.3	2	23	241	262	241	262	0.97
4	26	0.0062	0.5	10.6	0.2	3	23	270	290	268	290	0.96
5	26	6.1e-05	0.0049	17.0	1.1	2	23	303	324	303	324	0.98
6	26	2.3e-06	0.00019	21.4	1.1	1	23	345	367	345	367	0.99
7	26	1.7e-05	0.0014	18.7	0.3	1	19	373	391	373	392	0.97
8	26	1.1e-05	0.0009	19.3	1.2	1	23	401	424	401	424	0.96
9	26	0.0025	0.2	11.9	1.5	1	23	433	456	433	456	0.97
10	26	3.6e-07	2.9e-05	24.0	0.4	1	23	579	601	579	601	0.98
11	26	0.00051	0.041	14.1	0.8	1	23	607	629	607	629	0.99
12	26	0.065	5.2	7.4	4.5	1	23	635	657	635	657	0.97
13	26	1.3	1e+02	3.4	0.8	1	13	661	673	661	680	0.79
14	26	0.0017	0.13	12.4	5.6	1	23	737	759	737	759	0.97
15	26	3e-05	0.0024	18.0	4.9	1	23	765	787	765	787	0.99
16	26	2.1e-06	0.00016	21.6	1.3	1	23	793	815	793	815	0.98
17	26	0.00094	0.075	13.2	8.2	1	23	821	843	821	843	0.98
18	26	0.1	8.3	6.8	3.0	2	23	1193	1214	1192	1214	0.97
19	26	3.8e-06	0.00031	20.8	0.7	1	23	1220	1243	1220	1243	0.98
20	26	2.6e-08	2.1e-06	27.6	1.4	2	23	1341	1362	1340	1362	0.98
21	26	2.6e-05	0.0021	18.1	3.2	1	23	1368	1390	1368	1390	0.99
22	26	0.00011	0.0085	16.2	4.1	1	23	1396	1418	1396	1418	0.97
23	26	2.6e-05	0.0021	18.1	3.4	1	23	1424	1446	1424	1446	0.99
24	26	2.4e-06	0.00019	21.4	0.8	2	23	1691	1712	1690	1712	0.97
25	26	1.6e-05	0.0013	18.8	4.6	1	23	1718	1740	1718	1740	0.98
26	26	8.3e-06	0.00066	19.7	5.5	1	23	1746	1769	1746	1769	0.97

Sequence Information

Coding Sequence: ATGTCTGCAAACATGTTGACAGAACAGAATGTAATTATGGAATTCACTGACTCTAGCAATACAGTACCGATTGGTTTTATGACTGCGGATGATGGTCACACGCTTTTTGCAGTGGGTGagcATGAGGATGGCACATTGGAAATCATGGCAACCCCTATTACATTAATGCCACAAAATAACATAGTATCTTCAGCATTGATAAAGACTGTGGATGGAAACTTTATTTTGCATcctactatttttcaattaaatttcgAAAGTTCATCAGGAAATGCTGTGATGCAACAAGCAAATCTACTTCCAATACAACAGAATAGATCTGCGGTTAcagaacaattaaaaataatacagaatATAAATGAGTGTGCAATTACAGAACCCTTGTTGTCTGTTAGAGAAGAtagcaatatattaaataaagaagaaaattgTAGAAGACAGACAAAAGAACAGGCAACAATTGACAATCATGTTAAAAAAAGCATGTCTGTATCTACATCTGTACATAAAAAGTCTCCAGGCAGACCAAAAAAGACTGagAATACACAATCTTTGAAGTGTGATATATGTGGGCAAGAATTTACTAAGCATGCATTATACCGCAAACATATGGAAAATCATGCCGAAGAAAAACCACATAGATGTCCAAAATGCCCAGCATCTTTTAATATTCCAATAAATTTCACGCTTCATATGGCAACGCATAATATCGGTGACCCGAAATGTCCTGAATGTGGTAGGAAATACGCCAGAATGGCGAGTCTCAAATCTCATATGTTGCTACACGAGAAGGAGGAGAACCTCTTCTGTACAGAATGCGAAGACGCTTTTTCAACAAAGgCTCAACTGGACGCGCATTTGAAGCTTCACGGAGAAAAGTGGTCGAATGAGGATGTTGGCGTACGAAAGTGTAAATTATGTAACAAGCAATTCACACAACCTGCGCTCTACCGAATGCACATACGCGAACATTATAGACTACAAACGAAAATAGTAAAGCAAACTAAGAAGGGAACGAAACATAAAACAATGTACAAATGCACCATATGCTTGAAGAATTTCCAAAAGCCGAGCCAGCTAATGCGGCATATCAGGGTACACACCGGAGAGAAACCCTTTAAATGTACCGTTTGCAACAGGGCATTCACGCAAAAGAGTTCGCTACAAATCCACGCGTGGCAACACAATGGTATCCGACCGCATACCTGCAGCCTCTGCAACGCCAAGTTTAGTCAGAAAGGAAATCTAAAAGCACATATCCTCAGAGTGCATAATGCACCGGAAGGTGAGCCGACGTACGCCTGTTCTTATTGCTCCTGCATCTTCAAGAAGCTGGGCAGCTTAAACGGTCACATAAAGCGAGTGCATTCTAATCCGGAGGAGGAATCCACCGAGAAGTCCTCGGCAGCTAATTCCAGTATCTCCTCGGAAGCTGACATGCGCGCAACAGTCGATAGCGTTATATCGCAGTTGGCGTCTTTGGAAGCTGTTGTAAATAATACTGCAGATTCTACGGGGACTGTAACGTTGAATGCGGAGCAGAACGATATATTGCAACAGGCGTTGAAAAATAGCGGTTTGCCGAACAAAAACGAAGTTTCTTTGAAAGAAATCGCAGAGTCGAAAAAAGATTCTTCGCCAACAACGTATGTTACATTGTTGGATAAGACTGCTGGTAGTTCTTCAAGcaaGTATCACGCCATAAAGCAACGCTGCGTAGGAAACGTACGGTGGTACGTGTGCTCCTTTTGCCCGAAAGAGTTTAAAAAGCCGTCGGACTTGATACGTCACTTGCGTGTGCACACTCAGGAAAAGCCCTTTAAGTGTATGTATTGCGTGCGTTCTTTCGCGCTAAAGTCGACAATGATAGCGCACGAGCGGACTCATACCGGAGTGAAAAAGTATGCTTGCGCCTCCTGCAATAAAACTTTCGCGTGCCATAGTAGCCTTACCTCTCATACAAGATTACACATGAAACCACACAAATGCAATGTATGCAGCAAGTTATTCAACTCTAGTATCACTAAAAATCATATGAAGTGTCACGCGCGGGAGAAGCCCAAGATATCGCCAGAAGCGGAGAGTTTGGTGCCACAAGTGATACTGCAGGAGCCACTTGTTATCAGCGATGCCGGCAACAAGATCAGCGTTGCCCAAGTGCAATCGAAACAAAAACAGTTGTACGAAAATACCGAAAAAACCAGACCACACGTATGTTGGGTCTGTCACGCGGCATTCAGGAAAGTCAGCCATCTGAAGCAACATTATCGTAGACATACGGGCGAACGTCCTTACAAGTGCTCCAAATGCGATAGGAGGTTTACATCGAACAGCGTCCTGAAATCTCACCTACACACACACGATGACGCGAGGCCCTATAGTTGTCCGGTATGCAACACAAAGTTCTCTACGCAAAGCAGCATGAAGAGGCATTTGGTTACACATAGCAATAAAAGGCCATTTATGTGTCCATATTGTCACAAAACGTTTAAGACGTACGTCAATTGTCGGAAGCACATAAAAAGACACAAACATGAACTAGTGCAACGgCAATTGGAGGAACAAAAGACGCAAGAGCAGAAGGAACAACAGCCTTTAAGAGAGGACAAAGAAGCTGGCTCGGCACCTTTACCAGCAAACATCACTCTTGCTGAAGATATGGAAGTGTCGTTCCAACCGCAAATGGCACCAGATTTCACGCAGGCCTTTTCCGATCAGTTTCAAAATATTAGCGCAGAGAAAGAAAAGTCCTTATTGACGAACAGTGCAACATCAGTAGCAAACCGTAATTTAGGAACTTCGCAAACTTTACATGCTGATGAAACTGGCACCATCACGTTATCTCATTATTCTGGAGATCAAACCCTCACAGCGGAAAGCATACGAGAGATCGAGGAGACGTTGAATCAACAGCTTTTTAATATTGGCATGAATCTCGGACTGACGAATAATTTACCAAAGCAGATGGACGAGACGAATACGAATTCCCTCGACAATTCCAGGGAACAGCCGGTGCTCAATATAATTTACGAACATAACAAAAATCTGGATTCGTCCGGAAATACCATATTCACGCCGCAATTCGATTCATTTGATATGAGCCAGATTACGTTACAGACGGATAGCGAGATGGACATTGGTTTGAATTCGAGCAACACGACGAACATGTCCAGTATTTTGCCCAGATCCGTGGAAGGAGACAACAGACAGCAAGAAGAACAACAAACGGTTCCAGTTACTACAATCGATAATATAGACACTTCTGCAATTGCGAAGAACACTCATTTAACAGTAATAAATCCTAAGGACAATTGTTCGGAATTGGTGAGATTTTCGCAAGTGTGTCCATCGAAGTATTCGAAGGTTATCGCGAAAGCGGACACCGCAAACGGATTGATCGAGATGCAAGGTGCAACTGAACATGAAAAATCGCTACAGAAGAGTAACATTATATCATGCGACAGCGAGGGAAATTCTTTATTcatGAAGAACTTTCAAAGTACAATACAACCGGAGACGTTCGTTTCTTCTAAAACGAATAACTCGGTCAAAATATCGATGTACAGTAATCTGTTGGAGTGTCACATATGTCATCGTAATGGTTTCACAGCAGAAAGATTAAAGGAACATTTGAAATCTCATGGTGGTGCCAAAATGTACGAGTGTCCGGAATGTTCTCAGCGATTCTTCACGAATGGCGGTCTCAACAGGCACATGAAGAGACTGCACACGGAGCTATTAAAATGTGCGACTTGTGAGCAAAAGATGCTAGACAATAAATTGCAATTGAAATATCATCACAAAATGCATAGCGGAGATTGGAAAGTTGTGCAGGTGGAATCGAACGAGAAGGAAGTGATCTCCAGTTCCTGTCTTCCATCGATAACGACGTCAGATGTCCCAGTGAATTCGGACTCATCGGTATCTGAGAAGGTACTGATGGATACAGTTGCCGAGAGGAAAAGCATGGACCGCGTGaacGGAAACTTGGAGAGGAAAGAGACGAAAGAATACACGAACAAATGTAAGTACTGTCCAAAAACTTTCCGAAAGCCGAGCGACCTGATTAGGCACATTCGTACGCATACGGGCGAACGACCATACAAATGCGATTACTGCAATAAGAGCTTTGCAGTTAAGTGCACTTTGGATTCGCATATGAAGGTTCACACGGGCAAGAAAACGTTCTGTTGTCATGTCTGTAACAGTATGTTTGCCACGAAGGGCAGTTTGAAGGTCCACATGCGACTGCACACTGgTTCAAAGCCATACAAATGTCCCATGTGCGACCTGCGATTTCGCACTTCGGGTCATAAGAAGGTGCACATGCAGAAGCATGCGAGGGAACATAAACGCAAACCTAAGCACCAAAAGGTCGCAGCAGTGGCGGAAGCGACAGCCAGCCTCGAAGAAATTGACAACAGTTCTCTGGATCACacatcgacgacgacgacgatgacgacaaCAACAACGATGACTGGCAGTGAGATCACACCATCGCAGAATCTCGATTATTCCTCGTTGGAGAACCCCGAAATGAACCTTAGCGATGCGATTCATCTATCGAGTCAAATCGCGTTCAATCATACTgacgcgacgacgacgacgattcTCAACAACAACTCCATGCTGTCTTTAAATGACAGCAACGAACTGGTGGCGAATCTGCAATTCCTGCTAGCAAACGGTCTTGTCACTATCCAAACAGACGATACCCTGTTGACGACGCAGCCGGCAACAAATAACACCGAAGTGTCGACCAACGTGATCGAGTTGGTCGGTACGAATTCTTTCCAGGAAGCCTGCAATCTGGGTAACGCTAATCATCAGATAGTGATAACTAGCCAGGTGCCAAGTGAGACGACGACCGCGAATGCGAACGACGCGGCGATTATTCAGATGAACGATTGCTTGCCACCTGTTTCTATAGTACAGATGCAGAATCATGGTACGAATCTCGGTGACGACGCATCCAGAGCAAAAACAAGCAGTCAGTCAACAACGATAGCATGTGATAGTCAAGCGGTGACAACGGGGACAGCTAAAACCTTGACACAGTCGTCGCGGAAAGAGTGCGACGTATGCGGTAAGACGTTCACGAAGCCATATCAGATGGAGCGTCACAAGCGCATCCACACGGGCGAACGACCGTACAAGTGCGAGCAATGCGACAAATCGTTCGCACAGAAGTTCACGTTGCAGCTGCACCAGAAGCATCATACCGGCGACCGACCGTATCCCTGTCCGCACTGCAAGCAATCGTTCACGCAGAAGTGCAATTTGCAGACGCACCTGAAGCGCGTCCATCAGCTGGTCATGCTCGACGTCAAGAAATTGAAGAGCGGCCAACAGATGTTGGGCGCGTTACTGCAGGAAAATCAAGGAACGGACACCAAGCTGGTGAATCTGGACGATATCTTGGTGGTAGATTTTCTCAAATGA
Protein Sequence: MSANMLTEQNVIMEFTDSSNTVPIGFMTADDGHTLFAVGEHEDGTLEIMATPITLMPQNNIVSSALIKTVDGNFILHPTIFQLNFESSSGNAVMQQANLLPIQQNRSAVTEQLKIIQNINECAITEPLLSVREDSNILNKEENCRRQTKEQATIDNHVKKSMSVSTSVHKKSPGRPKKTENTQSLKCDICGQEFTKHALYRKHMENHAEEKPHRCPKCPASFNIPINFTLHMATHNIGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWSNEDVGVRKCKLCNKQFTQPALYRMHIREHYRLQTKIVKQTKKGTKHKTMYKCTICLKNFQKPSQLMRHIRVHTGEKPFKCTVCNRAFTQKSSLQIHAWQHNGIRPHTCSLCNAKFSQKGNLKAHILRVHNAPEGEPTYACSYCSCIFKKLGSLNGHIKRVHSNPEEESTEKSSAANSSISSEADMRATVDSVISQLASLEAVVNNTADSTGTVTLNAEQNDILQQALKNSGLPNKNEVSLKEIAESKKDSSPTTYVTLLDKTAGSSSSKYHAIKQRCVGNVRWYVCSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGVKKYACASCNKTFACHSSLTSHTRLHMKPHKCNVCSKLFNSSITKNHMKCHAREKPKISPEAESLVPQVILQEPLVISDAGNKISVAQVQSKQKQLYENTEKTRPHVCWVCHAAFRKVSHLKQHYRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDARPYSCPVCNTKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHIKRHKHELVQRQLEEQKTQEQKEQQPLREDKEAGSAPLPANITLAEDMEVSFQPQMAPDFTQAFSDQFQNISAEKEKSLLTNSATSVANRNLGTSQTLHADETGTITLSHYSGDQTLTAESIREIEETLNQQLFNIGMNLGLTNNLPKQMDETNTNSLDNSREQPVLNIIYEHNKNLDSSGNTIFTPQFDSFDMSQITLQTDSEMDIGLNSSNTTNMSSILPRSVEGDNRQQEEQQTVPVTTIDNIDTSAIAKNTHLTVINPKDNCSELVRFSQVCPSKYSKVIAKADTANGLIEMQGATEHEKSLQKSNIISCDSEGNSLFMKNFQSTIQPETFVSSKTNNSVKISMYSNLLECHICHRNGFTAERLKEHLKSHGGAKMYECPECSQRFFTNGGLNRHMKRLHTELLKCATCEQKMLDNKLQLKYHHKMHSGDWKVVQVESNEKEVISSSCLPSITTSDVPVNSDSSVSEKVLMDTVAERKSMDRVNGNLERKETKEYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDYCNKSFAVKCTLDSHMKVHTGKKTFCCHVCNSMFATKGSLKVHMRLHTGSKPYKCPMCDLRFRTSGHKKVHMQKHAREHKRKPKHQKVAAVAEATASLEEIDNSSLDHTSTTTTMTTTTTMTGSEITPSQNLDYSSLENPEMNLSDAIHLSSQIAFNHTDATTTTILNNNSMLSLNDSNELVANLQFLLANGLVTIQTDDTLLTTQPATNNTEVSTNVIELVGTNSFQEACNLGNANHQIVITSQVPSETTTANANDAAIIQMNDCLPPVSIVQMQNHGTNLGDDASRAKTSSQSTTIACDSQAVTTGTAKTLTQSSRKECDVCGKTFTKPYQMERHKRIHTGERPYKCEQCDKSFAQKFTLQLHQKHHTGDRPYPCPHCKQSFTQKCNLQTHLKRVHQLVMLDVKKLKSGQQMLGALLQENQGTDTKLVNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00280100;
90% Identity: -
80% Identity: -