Nful012110.1
Basic Information
- Insect
- Nylanderia fulva
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_005281655.1
- Location
- NW:93872-100093[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-104 2.3e-100 335.5 35.9 1 300 29 327 29 327 0.94 2 2 0.024 3.5e+02 -0.1 3.2 140 173 354 387 330 399 0.47
Sequence Information
- Coding Sequence
- ATGGAATCAACTATAGCTGGTCGAAGGAGGACTGCCACAAGGCATTCTGCGGAGGATCAAGCATTGGATCAAATAGCTAAGGAggCAGAAGCAAGACTTGCTGCTAGGAGACAGGCAAGAGCAGAAGCCAGAGAAATCCGAATGCGTGAATTAGAGAGACAGCAAAAGGAAGCGGAGGAGAATGCTGACAGGGTTTACGACATGTGTGCAGCTGATGTGAATAGAACCATGAGAATAACTCCAGATCCAGTACGTACATCACGACTTCTTACAAATTCCAATAATTTTCAATCAAGTCGTAGATCTTCAGAAGATTCATTAGAAGATGCAGGATTAAGTAGAGATATTAGGCTGGAATtaaaagaatttgaagaaaaattCAGGAAGGCAATGATAGCTAATGCTCAATTAGACAACGAAAAATCATCTTATGTCTATCAAGTTGATTTATTAAAAGACAAATTAGAAGAATTAGAAGAAACAACTGTACAATTACGTAGAGAATAGGAAAAGAATCGAGATGCGGAGCAATTAAAACGAGTCAATCAGAAAATAAAAGACGATTTAAATATTTGTCGGGCACAATTATTAGAAAGAGATACACTTATACaaGAAAATGGCTTAATTATTGTTGACAATGAAGAAAGTGAAGATGAAGATAATGAAAATATGGAAAATAgatcatattgtaaaaaaaGGGTACTAGTCAGTACAGAAGCTGCAGAATTATTGGAAACAGCTGGCAGAGGTTCCCTAGATGTTCGATTAAGGAAATTTGCTTGAAAAAAGGAATTGCAAGATGAAATTCGACATTTAAGATTGGAATTGGAAGACACTAGAAATCGCGTGAGATCCGAAAGATCATCTGGCTCAGTATTAGCAGGTTGCTTATCAGAAAACGATGATATTCAGCGTGAAGCAAACAAATTGTTAgcagattataaatttaaattacaaaaagcAGAGCAAGATATGTCCACACTACAAGCAACAGTAGCTAGATTGGAAAGTCAAGTAATTCGTTACAAATCAGCTGCAGAAGCATCTGAAACAGAAGATGAATTGAAAGTGGAGAAAAGAAAGTTGCAAAGAGAAgtAAGAGAAACGCAAGCTCGTGTAGAAGAATTGGAGACTGCAAACACACATCTTCAACGATTAGACAAacttaaaaatgcaaaatcgGCCCTTTTGAAGGAGCTTTGA
- Protein Sequence
- MESTIAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCAADVNRTMRITPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDIRLELKEFEEKFRKAMIANAQLDNEKSSYVYQVDLLKDKLEELEETTVQLRRE*EKNRDAEQLKRVNQKIKDDLNICRAQLLERDTLIQENGLIIVDNEESEDEDNENMENRSYCKKRVLVSTEAAELLETAGRGSLDVRLRKFA*KKELQDEIRHLRLELEDTRNRVRSERSSGSVLAGCLSENDDIQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASETEDELKVEKRKLQREVRETQARVEELETANTHLQRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- -
- 80% Identity
- -