Nful000653.1
Basic Information
- Insect
- Nylanderia fulva
- Gene Symbol
- usf1
- Assembly
- GCA_005281655.1
- Location
- NW:1204013-1206753[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.04 2.9e+02 1.4 0.1 11 38 140 168 139 173 0.84 2 2 2.5e-08 0.00018 21.3 1.5 17 48 220 251 216 260 0.88
Sequence Information
- Coding Sequence
- ATGGACATCTTGGAGCAGCAGCTCGAACAGCAGGATGTCAGcgTCTCCAAAGACGACGGTGGTGACACTGGAATCGTTATCGAAGAAACAGAGATTGTGGATTGCGAAGGAGATCCTATTGGAGAGGAAGAAATGCATTATCCAGAAGCCTTAGCGTATCGAGTTGTCCAAGTGAATGGCGCAGCAGCCATACAATCAACCAACGAGATAGAACTGCCTGTGTCGCAACCAGGGAATAATACTGTACAGGTTCTAACGTCACCCTTGAATGGTCAGTTCTATGTTATTGGGAATGCTAATGACGTCTTCACCACGGCGCAAGCATCAAGATCCCTGGTGCCAAGAACGACCACGCTGCAGATAGAAACCCCGAGGAATTGTACTAGTGGCTTGAAAAAGaGAGATGACAGGCGGAGAGCGACACATAACGAAGTCGAACGTCGGCGTAGAGATAAGATAAACAATTGGATTATAAAGTTGAGTAAGATCATCCCTGAGTGTAACACAAGTGCTAATACTACAGGTAGTGGTAGTAGCGGAGAGGGAAAAACTAATTATGAAACTCAgAGCAAAGGAGGTATTCTGGCAAAAGCCTGCGAGTACATAGCGGAATTGCGCATAGCTAATCAAAATCTGAACCAATATCTTCGAGATAATGAGAAATTACGACAAGAGATCACAGCATTGAAACAATTAGTCACCCAATTAAAACGCGAAAATAATCAGCTCAGGACGCAAATATCATCGTCCTCCTCCTCATCGGCCACTAATAGTGTTGATGTTATACATTTGAGCCCTTAA
- Protein Sequence
- MDILEQQLEQQDVSVSKDDGGDTGIVIEETEIVDCEGDPIGEEEMHYPEALAYRVVQVNGAAAIQSTNEIELPVSQPGNNTVQVLTSPLNGQFYVIGNANDVFTTAQASRSLVPRTTTLQIETPRNCTSGLKKRDDRRRATHNEVERRRRDKINNWIIKLSKIIPECNTSANTTGSGSSGEGKTNYETQSKGGILAKACEYIAELRIANQNLNQYLRDNEKLRQEITALKQLVTQLKRENNQLRTQISSSSSSSATNSVDVIHLSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01119990;
- 90% Identity
- iTF_01077188;
- 80% Identity
- iTF_01077188;