Nrev021502.1
Basic Information
- Insect
- Nycteola revayana
- Gene Symbol
- -
- Assembly
- GCA_947037095.2
- Location
- OX344852.2:12392575-12392880[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-10 2.3e-07 31.4 0.1 2 39 16 54 15 58 0.92
Sequence Information
- Coding Sequence
- ATGATGCGCACGTACAAACCCAAAACTGATAGAAAAAATATCAATGAAGAAAACATTGAACACGCAATACGTGAAGTATTGTCAAAGACTTTATCTATACGCAAAGCAGCCGACAAATATCGCATCAAAACTGCGACCCTACAACATCGCATAAAAAAAGCCAGAAAATCATTTGAAGCTACCAGAATATTATCTACAAATGAAGCATCCTCTTCATTACAAGCAGAATCTTCTTTATCACAAGCAGGTCCATCTTCACCACAAATAGCACCATCTATGGAGATGGCACAAATAGAGAGATGTTAG
- Protein Sequence
- MMRTYKPKTDRKNINEENIEHAIREVLSKTLSIRKAADKYRIKTATLQHRIKKARKSFEATRILSTNEASSSLQAESSLSQAGPSSPQIAPSMEMAQIERC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01076378; iTF_01076379; iTF_01076380; iTF_01332517; iTF_01332513; iTF_01332514; iTF_01332515; iTF_01332516; iTF_01332508; iTF_01332509; iTF_01332510; iTF_01332511; iTF_01332512;
- 90% Identity
- iTF_01332517;
- 80% Identity
- -