Nmun006344.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nudaria mundana
Gene Symbol
-
Assembly
GCA_963556515.1
Location
OY748289.1:4128044-4140742[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.04 5.1 9.0 2.2 1 23 204 227 204 227 0.94
2 30 0.00086 0.11 14.3 0.2 2 19 259 276 258 279 0.93
3 30 1.6e-05 0.0021 19.7 0.8 2 23 316 338 315 338 0.96
4 30 5.5 7.1e+02 2.3 1.5 2 19 353 370 352 372 0.81
5 30 0.0026 0.34 12.7 0.1 1 23 383 406 383 406 0.97
6 30 0.0088 1.1 11.1 0.3 1 23 426 448 426 448 0.95
7 30 8e-05 0.01 17.5 1.0 2 23 491 513 490 513 0.95
8 30 0.00051 0.066 15.0 4.2 2 23 553 575 553 575 0.97
9 30 0.0088 1.1 11.1 0.2 1 23 625 650 625 650 0.95
10 30 0.00051 0.066 15.0 0.1 1 23 704 726 704 726 0.97
11 30 0.00063 0.081 14.7 5.0 1 23 737 759 737 759 0.98
12 30 3.8 4.9e+02 2.8 1.0 2 23 771 792 770 792 0.90
13 30 0.002 0.26 13.1 0.6 1 23 802 824 802 824 0.98
14 30 0.00066 0.085 14.6 4.7 1 23 853 875 853 875 0.96
15 30 0.00075 0.097 14.4 3.4 1 23 886 908 886 908 0.98
16 30 2.5e-05 0.0033 19.1 1.8 1 23 916 938 916 938 0.97
17 30 7.9e-05 0.01 17.5 0.6 2 23 958 980 957 980 0.97
18 30 0.95 1.2e+02 4.7 0.2 1 23 998 1020 998 1020 0.90
19 30 0.24 31 6.5 4.2 1 23 1027 1049 1027 1049 0.97
20 30 0.0011 0.15 13.9 1.9 2 23 1060 1082 1059 1082 0.94
21 30 0.047 6.1 8.8 0.2 2 23 1105 1126 1104 1126 0.95
22 30 0.0019 0.25 13.1 0.2 2 23 1207 1228 1206 1228 0.95
23 30 8 1e+03 1.8 5.6 5 23 1238 1256 1236 1256 0.94
24 30 0.014 1.8 10.4 0.9 2 23 1267 1289 1266 1289 0.95
25 30 0.041 5.3 9.0 4.1 2 23 1306 1324 1305 1324 0.95
26 30 1.3 1.7e+02 4.2 1.6 2 20 1328 1346 1327 1347 0.91
27 30 0.49 63 5.6 0.9 2 23 1397 1418 1396 1418 0.93
28 30 0.0013 0.17 13.7 1.4 2 23 1429 1451 1428 1451 0.96
29 30 3.8 4.9e+02 2.8 0.3 3 23 1468 1485 1467 1485 0.77
30 30 0.011 1.4 10.7 4.3 2 21 1489 1508 1488 1509 0.95

Sequence Information

Coding Sequence
ATGGCCCTCAAACTTGGAAAATGCAGGCTTTGTCTCAAGCTTGGAGACTTTTACTCCATCTTTACGGTGGACAATTCATTGCAGCTCGCAGAGATGGCAATGGAATGCGCCCAAATTAAAATCTATGATGGAGATGGATTACCAGACAAAGTATGCTCAGAATGTGTACAGAAACTAAGTAGTGCCTTCATATTCAAACAACAGTGTGAACGTGCTGACCAAGAGCTGAGACGGAACTATGTGCCGCCACCAGGATTTAGTATCAGTCCTCCACCACCAAACAGACAGAGCAGTGACTCTGCCTTCTCTAATCACACTGATATCTCCAACCTTACCAAACCATCCTCTTCTATTGAAGATAAACCATCTCCAGCATCCCGAAGTCGTAAACGGAGTATGGAAAGTATTAGTAACACATCAACAAGAGGGCGTTTTGAAGATTGTAAACCTACCAGCTCAAAACGTGTAGAAGAACTGCGAAAATCACAAAAAAAGAGACCACGTTTACAATCTGAAAACAATTCCCAACAGGACTCTGACTATGAGGACAATAATAGTGCATCAGGTTTTAATGAAACCGACTCGGACGAACCGCTCATGAAAAACACTTTTAAATGTATATCATGTCAGAAACAATTTGCAAGCAAGAAAAGTTTAGCAGTTCACACAAAGAGATTTCATGGGAAAATAGCTGAAAAGCCATCTGAAGATATTACACTTGAAGTCCCACCAAAGACAAATACCGAAGATGCTACAGATGTAGAAGACAAACTGACATGTGACAAGTGTGACAAAacgtttaaattaaaaattatgttgaaaCGTCATGCAGATGTATGTGGCAAGACGCCCGTCAAGCCACTACAGAAGGAACTACAGATATCATTGTCACCTATAGATGGAAAGTTAAAGTCTAGTCCTCCACAAGAGACTGTGATCACAATTTCTTGTGAACACTGCACAGCTAGATTCAAAAGTCTGGATAACCTAGCCAAACATATGAGAGTAGTTCATGCAGCTGTTTTGAAGAGACAAGCAAACAAGAAAGTTCCTGTGCCCTGTTTGTATTGTAACAAAATTTTCCACAATCACTATGAACACACAGCTCACTTCACTAGCTGCCGTGATTATgatgaatctaaaccattcgcATGCCCTGTATGTGATAAAGTGATGTCTAAAAAACCGGCATACTTTCAACACATTAGGATGTTACACTTTGAGCCTCGTAAATCTAATGTAGATCCAGAATCAGAAGTACAGGTACAGGAGTATCACGAGTGTCGGATGTGCGGGATGAAGCTGGCATCGCAGGAACTGCTCATCAAGCATTTGTCCGCGCACGTCTCCAATATTGAGGACGATGATGGCGCAGCTGAAAATTACTCCAGGGACAGTCACCAGGACGATACAGCGTCTGTTCATTCAACACAAAGCAACACATACCCTGGCACCAAGAGTGGCATGATCCAATGTCCTATGTGTGACAAAGAATTTAAATACAAGAAAGCTTTCCAGACACATCTCGCCAAATTCCATACAGATGTACCAGTTCAGGTTAAAATGGAGCCACCAAACAAAGCTTCGACGAGTCTTCTAAGTGAGAAAACGCAGTATCGTTCTGATTCAGAATCTAGTCAGGAAGAAGAGGACAACACGTGTGATATATGCGAAAAGCGGTTCTCGTACAAACGTCTACTGGTCCATCACAAGCGGACCAAACACAATATGAGTTCGGGGCACAAAAGGGCCAAGATCTACCTCAAGGACTGCTCGGTCCGCTGCCTCatttgtgatctacaaatgaaGGTTGGTGACATAAACGAGCACAATCAAACTCATATAGCTAAAAATATGAAACCCAGGAATTTGTATACATGCGCCGTAGATGACTGCGACGCTACGTTCAAAGCGTGTAGTGCGCTCGCTACACATATAAAATTAGTGCATAGATTAAATAAGAAAGTCCAAGAGAATACGGTAAATCCGTCGGATTTTTGTGAAGTCGTTGTGACCAAGTCGGAACCCCTGGATTGGATCCAGAGTCACAACGACTTTGGTGAGGTTCCAATCGAAGAAAACGGCAAACCGCTAGTGAATCTGAGCGGCTTCACGTGTCCTATATGTGGCAAGAAGATGCCGACACTGATATCGCTGAAGAGACACGTCAACTGGCACACTAACGTCGGCAAAAGCTTGGAGAAGAAATATGAATGCTTCGTTTGTAAAGAGTCCTTCAGATTCCAACGCCACTACAAGCTCCACATGCGCGAGCACTACACGGACACGAACCTGGACCCCGTGCACCTGACGTGCGCACTCTGCGGCCGCAAGAGCAAGCACCTGCGAGCCGCGCAGGCACACAACAACTTCCACAAACAAACCCGCTTCAAGAACAAGGACTATCAATGTGCCATCTGTGATAGAATATTCGAGCACAGGAAAGTGTACCTCTCTCACATGGCTATACATTTCAAAAAAGGTGACAGCGTTGAGAACACTATAGTCGGTGACGCAATACCTAGCAACCTAGATAAGACAGTTTTCGACGGCACCCACGTTTGTCCGCATTGTGGAAAAGTTTGTGAATCTGAGACTTCTCTGAAACACCATCTCATCTGGCACACTTCTAAAAATTTTCTTTATGCCGACCGACACCAGTGCAGTATTTGTGAGGTGAAGTTCACCAACAAGAGACGGTTGGAGTTGCATACCAGAACTCATTATGAAGATGACAACGGTCCTTTTAAGTGTCATATCTGTGGTAAAGGGTACACTGACGAAGGGTACTATAAAAGGCATGTCAAGGGACACAACTTTGACCACCAGTCGCATAAGAAGAGGATTGCGAAACTGAGGAAAGGCATGGTGAAGTGTCCCATATGTTCGCGGTTTTACAAGGATCTAGGTAAACTAATTCGCCATCTACGACGGACGCATCCTGAGAGCAAGATGATTAAGACGGATCCCGACGCCCCGCCTCAACCGTACTTTTCTTGTAAACTATGCGCTAAAGTGTTCCTGGATGAACGCAGACTGCAGGCGCATGAGGAGGCCCACTTGAGAAAGCCAGAGTTCTTTAAATGCAAGTTCTGCGggaagaaaactatatcattgAAAAATCATAGAATGCATATCAAGGGGCATTTGACACAGAAATATTTCGATAATCCGTTAAAATGTCCTCACTGTGAAGAGACGTTTACGCGTGGCTACGACCTGCACTACCACGTGCGAGATGTTCACGGCATCGAGGAAAGTTGGATCGCCGAGCGGAGTGAACCACGCCTTACAGGACCACTCAAGGACTTGCAGTGCTCCATTTGTATGAAGATCCTTGCGAGCAAAGGGAACTTCGAGCGACATTTAGACTACCACAATACCCTTAGATGCAACTATTGTTTTGATTACTTTAGCTCTCTTAGGTTCCTAGAAGgtcatttaacattttcgtGTGAAAAAAAGAAACTTTTAGGGGACTCTGAAATCTATCCCAAGAAAATCAAATGCCACAAATGTTACAAACCCTTCCACATTCAGGTGAAACTTGACTGCCACCTTCGCACACAGCACAATATCAAAGTGCAAAGAGAAGCGTCGTCGGGCAAGAAGGAAATCGTCTGCGACTATTGCTTTAAAGTATTCGAGAATGAGTATGCTCTGTCTAATCACAAAATTTATCATCGTACTATCGGATACTTTGGATGTATTTACTGCAAGCGAAAGTTTAATACGATGACACTGTACCGTAAGCACAAGAATCATCATTTTGCACAGCTTAATGTAGACGAACCAACGAAGTGTGAACATTGCGACGAGACGTTTGTCGCGTTCAGAGATATGATATACCACATGCGAGACGAGCACGGAGACGACAAAGATTGGGTGACATTACCGAAGGAGGACTTCGAGGACACGTGCAAAATCTGTAAcaaaacattttacaatttacaCAGGCACATGAGCTACCACGAGGAGACCAGGTGTAAGAAATGTGGCGAGTATTTCTTCTCGGTAGCCGATTTCGATAATCATCTCTGCCCTATAGAAAGTGACGACGAGGGCACCATTGCCGAGAACGGCTACGAACGCCCCAAATATGAGGAATGCAACTTTTGCTTCAAACCAATTACCAGAATAAGTTCCAAAGCCAAACACGATCATATACACAAAGGTTCCGGTTCAATATCGTGCAGGTTCTGTAGTCTCAAGTTCAAGACTATGGATGCGTTCAACATCCACGCCTTCTCGCACCGAAGCAGAAAGTATAACAAGAGGCCAATAAAGTGCAAGAAATGCAAAGAGAAGTTCGTGAAGTATGGTCTTTTCATCAAACACATGAAACTAGTGCACAAGTCTTTGAAGAAGATGCATTACAGAGCTACGGTTAAGCCGGAGCCTTGTGTGGTGTGCGGCGAAGAGTTCCCCAACTTACACAACCACTACCGCGCTCACCTCGTCAACAAGTGTACGAAGTGCAGCAAATACTTCACTTCCTCCAAACTATTTACTAATCACATGTGTGACAAAGAAGACGCCGATCCATCGAAAGTATTCACGTGCGATGCCAGATTGACTGAACTTATTAACTCGTATGCCCCTAAGGATCTGAAAGATGACGAGAAGTACTATGGTAACACAGACGACGAAGATGAGCAAGAGGAAACGTCATCTCAAGTGTGCGGAGAAGACGGAAATAGTCAGGAGAATATCGAGAGGAAGGACTTTGAAGATATCGATATTGATGAAAAAGATATTACTTTCCAACCATTATCTATACAGTCACCGATCATATCTGACGTGTTGTCGCTGTATCAGAAAGAAATGAATACTACAGTTGAAGatgacaatacaataaacttgaCTGATGACGATTCAGATGTAGACCAAGTAATGCAGAACCATGTCGATACCATCGTTATTAttgacgatgatgatgatgattga
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNSLQLAEMAMECAQIKIYDGDGLPDKVCSECVQKLSSAFIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDISNLTKPSSSIEDKPSPASRSRKRSMESISNTSTRGRFEDCKPTSSKRVEELRKSQKKRPRLQSENNSQQDSDYEDNNSASGFNETDSDEPLMKNTFKCISCQKQFASKKSLAVHTKRFHGKIAEKPSEDITLEVPPKTNTEDATDVEDKLTCDKCDKTFKLKIMLKRHADVCGKTPVKPLQKELQISLSPIDGKLKSSPPQETVITISCEHCTARFKSLDNLAKHMRVVHAAVLKRQANKKVPVPCLYCNKIFHNHYEHTAHFTSCRDYDESKPFACPVCDKVMSKKPAYFQHIRMLHFEPRKSNVDPESEVQVQEYHECRMCGMKLASQELLIKHLSAHVSNIEDDDGAAENYSRDSHQDDTASVHSTQSNTYPGTKSGMIQCPMCDKEFKYKKAFQTHLAKFHTDVPVQVKMEPPNKASTSLLSEKTQYRSDSESSQEEEDNTCDICEKRFSYKRLLVHHKRTKHNMSSGHKRAKIYLKDCSVRCLICDLQMKVGDINEHNQTHIAKNMKPRNLYTCAVDDCDATFKACSALATHIKLVHRLNKKVQENTVNPSDFCEVVVTKSEPLDWIQSHNDFGEVPIEENGKPLVNLSGFTCPICGKKMPTLISLKRHVNWHTNVGKSLEKKYECFVCKESFRFQRHYKLHMREHYTDTNLDPVHLTCALCGRKSKHLRAAQAHNNFHKQTRFKNKDYQCAICDRIFEHRKVYLSHMAIHFKKGDSVENTIVGDAIPSNLDKTVFDGTHVCPHCGKVCESETSLKHHLIWHTSKNFLYADRHQCSICEVKFTNKRRLELHTRTHYEDDNGPFKCHICGKGYTDEGYYKRHVKGHNFDHQSHKKRIAKLRKGMVKCPICSRFYKDLGKLIRHLRRTHPESKMIKTDPDAPPQPYFSCKLCAKVFLDERRLQAHEEAHLRKPEFFKCKFCGKKTISLKNHRMHIKGHLTQKYFDNPLKCPHCEETFTRGYDLHYHVRDVHGIEESWIAERSEPRLTGPLKDLQCSICMKILASKGNFERHLDYHNTLRCNYCFDYFSSLRFLEGHLTFSCEKKKLLGDSEIYPKKIKCHKCYKPFHIQVKLDCHLRTQHNIKVQREASSGKKEIVCDYCFKVFENEYALSNHKIYHRTIGYFGCIYCKRKFNTMTLYRKHKNHHFAQLNVDEPTKCEHCDETFVAFRDMIYHMRDEHGDDKDWVTLPKEDFEDTCKICNKTFYNLHRHMSYHEETRCKKCGEYFFSVADFDNHLCPIESDDEGTIAENGYERPKYEECNFCFKPITRISSKAKHDHIHKGSGSISCRFCSLKFKTMDAFNIHAFSHRSRKYNKRPIKCKKCKEKFVKYGLFIKHMKLVHKSLKKMHYRATVKPEPCVVCGEEFPNLHNHYRAHLVNKCTKCSKYFTSSKLFTNHMCDKEDADPSKVFTCDARLTELINSYAPKDLKDDEKYYGNTDDEDEQEETSSQVCGEDGNSQENIERKDFEDIDIDEKDITFQPLSIQSPIISDVLSLYQKEMNTTVEDDNTINLTDDDSDVDQVMQNHVDTIVIIDDDDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01502316;
90% Identity
-
80% Identity
-