Basic Information

Insect: Nowickia ferox
Gene Symbol: -
Assembly: GCA_936446695.1
Location: CAKZFO010000086.1:1476799-1482673[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.001 0.099 14.1 4.4 1 23 211 234 211 234 0.91

2 16 0.011 1.1 10.8 1.2 1 19 247 265 247 269 0.92

3 16 0.00024 0.023 16.1 0.5 3 23 274 294 272 294 0.96

4 16 3.2e-05 0.0031 18.9 1.6 1 23 300 322 300 322 0.98

5 16 0.00034 0.034 15.6 1.2 1 23 328 350 328 350 0.97

6 16 0.0011 0.1 14.1 3.2 2 23 357 378 357 378 0.97

7 16 0.00026 0.025 16.0 0.8 1 23 384 406 384 406 0.99

8 16 1.5e-06 0.00014 23.1 0.4 1 23 412 434 412 434 0.97

9 16 0.05 4.9 8.8 2.9 1 21 704 724 704 727 0.89

10 16 0.019 1.8 10.2 2.7 1 23 740 762 740 762 0.97

11 16 5.1e-06 0.0005 21.4 0.1 2 23 765 786 764 786 0.96

12 16 5.8e-06 0.00057 21.2 2.3 1 23 792 814 792 814 0.98

13 16 0.00034 0.034 15.6 1.2 1 23 820 842 820 842 0.97

14 16 0.0025 0.25 12.9 1.5 2 23 849 870 849 870 0.90

15 16 0.00044 0.043 15.3 2.3 1 23 876 898 876 898 0.99

16 16 0.00016 0.016 16.7 2.9 1 23 904 926 904 926 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.001	0.099	14.1	4.4	1	23	211	234	211	234	0.91
2	16	0.011	1.1	10.8	1.2	1	19	247	265	247	269	0.92
3	16	0.00024	0.023	16.1	0.5	3	23	274	294	272	294	0.96
4	16	3.2e-05	0.0031	18.9	1.6	1	23	300	322	300	322	0.98
5	16	0.00034	0.034	15.6	1.2	1	23	328	350	328	350	0.97
6	16	0.0011	0.1	14.1	3.2	2	23	357	378	357	378	0.97
7	16	0.00026	0.025	16.0	0.8	1	23	384	406	384	406	0.99
8	16	1.5e-06	0.00014	23.1	0.4	1	23	412	434	412	434	0.97
9	16	0.05	4.9	8.8	2.9	1	21	704	724	704	727	0.89
10	16	0.019	1.8	10.2	2.7	1	23	740	762	740	762	0.97
11	16	5.1e-06	0.0005	21.4	0.1	2	23	765	786	764	786	0.96
12	16	5.8e-06	0.00057	21.2	2.3	1	23	792	814	792	814	0.98
13	16	0.00034	0.034	15.6	1.2	1	23	820	842	820	842	0.97
14	16	0.0025	0.25	12.9	1.5	2	23	849	870	849	870	0.90
15	16	0.00044	0.043	15.3	2.3	1	23	876	898	876	898	0.99
16	16	0.00016	0.016	16.7	2.9	1	23	904	926	904	926	0.98

Sequence Information

Coding Sequence: ATGTTACAAGTATCTCAACCTGCTACTGCTTTTCACAACTTCAAATGTGGCGAAATTGTTTGTATTACACCTGGAGTTTACAATGTTACTTGCAGCTTGTGTGCTACCAAAATTCATCTCGACCAGTTCCCCAGCCACTTTCAGACGCAGCATCTTACATTGGCCGAAGAGAGCATTAATCTGGAGGAATTGGAGCTAAAGTGCAAATCTAAACTGGAAAAGGATGAAAACCTAATAGATAACATGATAATCAAGGAGGAGGATCCCGAAGATGATCCTATTAAACAAGAATTTGTTGAGGATGATAAAAGTTTACAGAAAATCTTAGGAGATAAAGAAAAGGAAGGCAAtgagacaaaaaataataaacgagTAGGGCCAGCAGTGGAAGTTGTTATGAAGCGGAACACTAGGAACTCAAGAAAAAGGCATATATCAAGTTCCCTCAAGGAAATAAAAAGAGACATCGAAgggaataaaaataaagatttggaaataaataaaaaagatttgaaAGCAGAATATGATAGTGATGATGTTGATATGGACAAGGATTGGTCGCCGGAAGATAAAATTTCGGACACAGATtgcgAACCTGACGACAAAGACTACCTTAAAGATGAGGATGCATTTCCTTGTCACACCTGCAAGCGTTCGTATTCTTCAAAGCGCAGTTTGCAAAAACACAACTACAGTGTCCATAATCCAAATAAACCACCCAAAAAATCTAAACCTGGACATAAATGTAGTGAGTGTAACGAGGTTTTTCGATCAGTTAGAGAGTTGCAAGGCCATAAATGGAAACACACCGGCATATTTTGTGATATATGTGGTAAACCTTTTACAAAGACTGGAAACATGAATACTCATAAAATACGTCATACGGGCATAAAGGCTCATAAGTGTAAAGAATGTGGTAAAGATTTTTTCTTGGCTAAAGAACTGAAAGCACATATGATTCGACATACGGGTATCATGCCTCACATATGTGAAATATGTGGCAAACGGTGTAGAGATGGCGGGGTGCTATCTGCCCATATGCGAAGACACACCGGTGAAAGGCCAGCCAAATGCGATGTTTGTGGAAAGTGTTTCTTTTCTTTCCATGATCTCAATGTGCATGCCGTTACACACAGCAGTGAAAGGCCGTTTAAGTGTGATATCTGCGGTTCAACATTCCAGCTCAAAAAAGCTTTGCGCGTACACAAACGTATACATTCAAAAGATCGTAatcatatttgtaaaatatgtgGCAAAGGTTTTGCTCAATCTGGTGGCCTTAACTCACATATGAGTACGCATGATGCTGCATTTGAGAAGCCAACAATTGAGAGAGCCCAACAAGTGTTTATTTCTGTTATGCCGGACAGTTCAAGTTCACACACGGAAAACCAAAGTGTATTGAGTACAGCTAATTGCATAATTTCAAGCAACACCGAGgttataaaattaattgtaaattgCTACAATACTTCCGAAAAGATGTTGAAAGTTTCCCAACCTCCTACTGCTTTTCACGACTTCAAATGTGGTGAAGTTTTTTGTATTTCCCCGATAGTTTACAGTGTTACTTGCAGCTTGTGTGCTACCAAAATCCATCTCGACCAGTTCCCCAGCCACTTTCAGACGCAGCATCTTGCATTGGCCGAAGAGAGTATTAATCTGGAGGAATTGGAGCTAAAGTGCAAATCTAAACTGGCCAGGGATGCCAACCTAATAGATAACATGATAATCAAGGAGGAGGATCCCGAAGATGATCCTATTAAACAAGAAGAATTTATTGATGATAAAAGTTTACAGAATATCTTAGGAAATACAGAAAATGCAAGCAATAAGACAGAAAATAATGAACAAGTAGGGTCATCAGTGGAAGTTGTTATGAAGCGGAACACTAGAAACTCGAGGAAAAGACATATATCAAGTACTCTCAAGGAAATAAAAAGAGACATCGAagggaataaaaacaaaatagatgtggtaaataaaaaagatttgaaAGCAGAATATGATAGCGATGATGTTGATATGGACAAGGATTGGTCGCCGGAAGATAAAATTTCGGACACAGGTtcTGAACCTGACGACAAAGACTACCTTAAAGATACTGCATTTCCTTGTCACATTTGCAAGCGTTCGTATCTTTCAAAGCAAAGTTTGCAAAAGCACAATTACAATATCCATAATCCAAATAAACcaccaaaaaaatctaaatctgAACATAAATGTACATTTTGTAGCGAGATTTTTCAATCAGCTCAAGATTTGCGCGACCATAAATTGAAACACGATACAGTTTGCGATATATGTGGTAAATCTTTTACAAAGCCTGGAAACCTCGTGATTCATAAAATACGTCATACGGGCATAAAGGCTCATAAGTGTAACGAATGTGATAAAGATTTTTACACATTAAAAGAACTGAAAGCACATATGATTCGTCATACAGGTATCATGCCTCACATATGTGAAATATGTGGCAAACGGTGTAGAGATGGTGGGGTGCTATCTGCCCATATGCGAAGACATACCGGTGAAAGGCCAGCCAAATGCGATGTTTGTGGAAAGTGTTTCTTTTCTATACATGATCTCAATGTGCATGCTGTTGCACATTCCAGTGAAAGACCTTTTAAGTGTGATATCTGCACTTCAACGTTCCAACGCAAAAAAGCTTTGCGCTTACACAAACGTATACACTCAGATGATCGTAagcataaatgtaaaatatgtgGTAAAGGTTTTGTTCAAATGGCTGGTCTTAATTGTCATATGCGTACACATGATGCTACCTTTGAGAAGTCAATAATTGAGAAAACCCAACAAATGCTGGTTCCTGTCATGCCGGACAGTTCAAGTTCACTCACGGAAAACCAGATTGTATTGAGTACATCTGATTGCATAACTTCAAATAGCACCGAGCCACTTCCAAATGCAGCATCTAACATTGGCCGGAGAGATACAAATCTGGTGGAAGTGGAGCTAAAGTGTAAAGCTGGACTGGCTAGAGATGCCAACCTCCTAGATAACATTATAACCAAAGAGTATGATCCCGAAGATGATACATga
Protein Sequence: MLQVSQPATAFHNFKCGEIVCITPGVYNVTCSLCATKIHLDQFPSHFQTQHLTLAEESINLEELELKCKSKLEKDENLIDNMIIKEEDPEDDPIKQEFVEDDKSLQKILGDKEKEGNETKNNKRVGPAVEVVMKRNTRNSRKRHISSSLKEIKRDIEGNKNKDLEINKKDLKAEYDSDDVDMDKDWSPEDKISDTDCEPDDKDYLKDEDAFPCHTCKRSYSSKRSLQKHNYSVHNPNKPPKKSKPGHKCSECNEVFRSVRELQGHKWKHTGIFCDICGKPFTKTGNMNTHKIRHTGIKAHKCKECGKDFFLAKELKAHMIRHTGIMPHICEICGKRCRDGGVLSAHMRRHTGERPAKCDVCGKCFFSFHDLNVHAVTHSSERPFKCDICGSTFQLKKALRVHKRIHSKDRNHICKICGKGFAQSGGLNSHMSTHDAAFEKPTIERAQQVFISVMPDSSSSHTENQSVLSTANCIISSNTEVIKLIVNCYNTSEKMLKVSQPPTAFHDFKCGEVFCISPIVYSVTCSLCATKIHLDQFPSHFQTQHLALAEESINLEELELKCKSKLARDANLIDNMIIKEEDPEDDPIKQEEFIDDKSLQNILGNTENASNKTENNEQVGSSVEVVMKRNTRNSRKRHISSTLKEIKRDIEGNKNKIDVVNKKDLKAEYDSDDVDMDKDWSPEDKISDTGSEPDDKDYLKDTAFPCHICKRSYLSKQSLQKHNYNIHNPNKPPKKSKSEHKCTFCSEIFQSAQDLRDHKLKHDTVCDICGKSFTKPGNLVIHKIRHTGIKAHKCNECDKDFYTLKELKAHMIRHTGIMPHICEICGKRCRDGGVLSAHMRRHTGERPAKCDVCGKCFFSIHDLNVHAVAHSSERPFKCDICTSTFQRKKALRLHKRIHSDDRKHKCKICGKGFVQMAGLNCHMRTHDATFEKSIIEKTQQMLVPVMPDSSSSLTENQIVLSTSDCITSNSTEPLPNAASNIGRRDTNLVEVELKCKAGLARDANLLDNIITKEYDPEDDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01398752;
90% Identity: -
80% Identity: -