Nfer016146.1
Basic Information
- Insect
- Nowickia ferox
- Gene Symbol
- dsx
- Assembly
- GCA_936446695.1
- Location
- CAKZFO010000118.1:4856501-4859910[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-23 1.7e-19 70.4 13.1 2 47 45 90 44 90 0.97 2 3 3 3.7e+04 -13.3 9.6 10 21 250 261 249 264 0.57 3 3 1.4 1.8e+04 -3.3 0.0 17 28 329 340 327 340 0.82
Sequence Information
- Coding Sequence
- ATGGTTTCTGAGGATACCAATTGGAATAGCAGCGACACCATGTCCGATACGGACATGCACGATTCGAAAAATGACGTTTGTGGCGGTGCTTCCAGCTCCAGCGGCAGCGGCAGCTCTGGCACCCCACGAACCAAACCGAATTGTGCACGTTGCCACAATCATggctttaaaatcaaattgaaggGCCACAAGCGCTATTGCAAATTTCGcaattgtaattgtgaaaaatgTCGTCTGACTGCCGATCGGCAACGTGTTATGGCTCTGCAGACGGCATTGAGACGTGCACAACAGCAGGATGAACAGCGTATACTACAAATGCATGAAGTGCCGCCGGTGGTGCATCCACCAACAGCTTTGCTTAAGGCTcactatcatcatcatcatcacttgCAGCATCATATAACAGAGCAactgcatcatcatcatcatccccATTTGGTGGATGCTACAGCAGCAGCTGTTGTGGGTGGCGTGCCACcacaccatcatcatcatcaccatcataTGTCACATGCTGCCGCAGCTCCTATATCAACAATACGCTCGCCTCCACATAGTGATCACAGTGCCAATGGCGTATCAAGTGCTGGTGGGGGCGGCGGCGGTGGTGGTGGTGTTGGCAGTAGTGGGAATTCTGGTAATATCGATCGTAATACAGCTAATCTGAATGGTCTGAATAGTAGCAGCAGTGTTGCCTCAAGTTCAACAATTGGTCAATCACATCACGTCTCACCGGACCAACATCAGCACAATAATAAccaacatcaacatcaacatcatcatcaccagCACCCCCATGCACATCTGTCGGCTGCACCCGCAACAGCACAGTCAGTTGATAGTTCTTGTGATTCGTCCTCACCATCGCCATCGTCTACATCGGGAGCAGTTTCGTTGCCTCTTAATCGCAAGCTTGTACCAGAGCATCACCAAAATGGTGCAGACATGTCTATAGtgctTGGGCCGCTTTATGAGCTGGCAACAAAACAGCATTCGACCGTGTGGGTATTCCAAGACGAGCTAAATCCAACAAAAGTTGTTCGTGGAAGAAGCACAGTGAAGCAAATGGTCGCCTGTTTCTTCGGCCGAATGGGTCATGTGGCCACTATTCCGCTTGAGCAACAAAGAACTGCCAATTCTGAACTGtccatttga
- Protein Sequence
- MVSEDTNWNSSDTMSDTDMHDSKNDVCGGASSSSGSGSSGTPRTKPNCARCHNHGFKIKLKGHKRYCKFRNCNCEKCRLTADRQRVMALQTALRRAQQQDEQRILQMHEVPPVVHPPTALLKAHYHHHHHLQHHITEQLHHHHHPHLVDATAAAVVGGVPPHHHHHHHHMSHAAAAPISTIRSPPHSDHSANGVSSAGGGGGGGGGVGSSGNSGNIDRNTANLNGLNSSSSVASSSTIGQSHHVSPDQHQHNNNQHQHQHHHHQHPHAHLSAAPATAQSVDSSCDSSSPSPSSTSGAVSLPLNRKLVPEHHQNGADMSIVLGPLYELATKQHSTVWVFQDELNPTKVVRGRSTVKQMVACFFGRMGHVATIPLEQQRTANSELSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01261031;
- 90% Identity
- iTF_00900609;
- 80% Identity
- -