Nfer018970.1
Basic Information
- Insect
- Nowickia ferox
- Gene Symbol
- dl
- Assembly
- GCA_936446695.1
- Location
- CAKZFO010000151.1:39843-44113[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-70 2.9e-66 223.6 0.1 1 169 52 221 52 221 0.99 2 2 2.3 2.1e+04 -3.7 0.0 135 161 226 252 224 257 0.72
Sequence Information
- Coding Sequence
- ATGCTTCCTCCCTTCACGATAGTAGATGGCGTTCTTTGTACACTCACTGACACAATGTGGCATCCACCTGTGGCATCCATTTCATCAGCATCTTCATCGCCCACTTCCACAAATTTATTGCAGCCCAATATTCCGAATTTAGAGTCGGTTCGCATTAAAATTGTGGAACAACCAGCCATGAAGGGACTTCGCTTCCGTTATATATGTGAAGGTCGTTCAGCTGGATCTATACCGGGAGTCCACTCAACACctgaaaacaaaacatttccCACTATAGAAATAGAAGGGTACGAAGGAAAAGTTAAAGTTGTTGTTTCCTGTGTTACCAAAGATGAGCCTTATCGACCACATCCGCATAATCTTGTTGGCAAAGAAGGTTGTGAACATGGTGTTTGTCTGACAACCATAAGTGGCCCTCCAATGAGAGCAATTTTTAGTAACTTGGGAATACAGTGtgttaaaaagaaagaaataaaagtaGCTCTTGAAGAGCGTGAAAGAAAACGTATTGACCCATTCAAAACAAATTTTGCCCATAAAGATCAACCTTCGTCAATAGATCTCAACGTCGTCCGTCTTTGCTTTCAAGCCTTTATTCCAATGCACGGGGTAAAGAAACCTATTCCAATACCACCAGTGGTGTCAGATCCTATATTTGATAAAAAGTCTATAAGCGATTTAGTCATTTGCCGTTTGTGTAGCTGTGCTGCCAAAGTAACGGGAGGTgacaatataatattattgtgTGAGAAAGTAGCCAGAGACGACATAAAAGTTCGATTTTTTGAATTGAGAAACAACGAGCTGTATTGGGAAGGTTTCGGTGAATTTCAGCAGACCGATGTGCATAAGCAAGCTGCTATTTCATTTAAGACTCCCAGCTACATCAACCCCGATGTAAATCATAAAGTAAAGgtatacatacaattatatcgACCTTCTGATGGGGAAACAAGCGAAGCCTTGCAGTTTGAATTTTATCCGGATCCAGTGGATAGTGAAACTGCTGCTGGCATATATTCAGTACCTATTTTGGATGACAATGGTAGTGATAATGAAGACACTATAACGAATGATAGTTTAGCTAGTATGCCAATAAATTCCGACAATTCAAATTAG
- Protein Sequence
- MLPPFTIVDGVLCTLTDTMWHPPVASISSASSSPTSTNLLQPNIPNLESVRIKIVEQPAMKGLRFRYICEGRSAGSIPGVHSTPENKTFPTIEIEGYEGKVKVVVSCVTKDEPYRPHPHNLVGKEGCEHGVCLTTISGPPMRAIFSNLGIQCVKKKEIKVALEERERKRIDPFKTNFAHKDQPSSIDLNVVRLCFQAFIPMHGVKKPIPIPPVVSDPIFDKKSISDLVICRLCSCAAKVTGGDNIILLCEKVARDDIKVRFFELRNNELYWEGFGEFQQTDVHKQAAISFKTPSYINPDVNHKVKVYIQLYRPSDGETSEALQFEFYPDPVDSETAAGIYSVPILDDNGSDNEDTITNDSLASMPINSDNSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01314439; iTF_01162038; iTF_01397095; iTF_01399235;
- 90% Identity
- iTF_01399235;
- 80% Identity
- -