Ndro011949.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Notodonta dromedarius
Gene Symbol
bab1
Assembly
GCA_905147325.1
Location
LR990189.1:233750-240493[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-25 4.3e-23 81.8 0.2 4 102 26 120 23 128 0.91

Sequence Information

Coding Sequence
ATGGCGCTACCACCGCAGCAGTTTTGTGTGAGATGGAACTCCTATCATACTAATTTGCAGGCGGTGTTCCCGCGGCTGCTGCTGACGGAGCAGTTCGCGGACGTGACGCTGGCGTGCGAGTCGCGCCAGCTGCGCTGCCACAAGCTGGTGCTGTCGGCGTGCTCGGCGTACCTGGAGCGGCTGCTGCTGCAGAACCCCTGCGACCACCCCATCGTGCTCATGCGGGACATGAGGTTCAGTGAAATGCAAGCGCTAGTGGACTTTATGTACAAGGGCGAGGTGAATGTCACGCAGGAGGAGCTGCCCAGCCTGCTCAAGTCCGCTGAAGCGCTGCAGATTAGAGGTTTATGTTCCAATGACACATCGAACCTCAGTTCCGAGCTCGGCAAGCCAGAGACAAAGGACTTCACAGTGGCGAGCGAAGCGCTCGTCGCGAACGCGCAACGAGAGAACGCTGTTAATGGTCCCACCAACCAACACAAGTCAACACAACAACACATGAGCGCAACAACAACCAACGGCACTAAAAAGAGGAAATCAGAGGAGAGGGCCGCCGAGATCAAGGAGGAGACCGTGGAGGAGGACGGGCTGTACTACGGCGAGCTGGACAACGACAACATGGAGTATCAGGAGGACGACGAGCCAGGCAAACCCGGAAGCAGCTTGGGCCAACCGTCTGGTCGTCGTCCATACCTCAGAGTTAAGCCAGAGAGTGAATTGTTCTTTCAAAATAAACTACAACATTTAGCCAAAGTAAATTCGGAATATATAAGCAGATTGTCCAAAATGAATGCCACAGAAATTCGTAATGAATTTTCCAAATACGGCTTTAATACGAACACGGAAGATCCATATTCGAAAAGTGTCGACAAAGCCGAAAATGATTATTACAAGTCGTGGCTCGAACAAAACGGCGAGCTAGAGGTGTCCTTGCTAAAAGCGAATCAAGTGAAAAAGCCAAAAATCGACACCAAAAATCAGAAGTCCGAAGTTGAGTTGATACCAAAGACGAAAAACAGTGTTGCAATCAAAGAAATTCTCCCCAAATTCGTGGAGAAGTCACAGTTGCGAAGGCGGGGTAGACCTCCGATATTCAAAGATAGGAATATAGATATTGGCGAGACGGTGCTAAAGTCGGACTTAGATCAGTTTTTGGAGGGAAAAGAGGTCAGTTCCTCAGGGCTGTCGCGTAAGGATTTGGAGAGAGTGATGATGGGGAAATTCAACCCTAATAGGAGGTATTCTAATGAGGCGATGTGGGCAGCCCTGATGGATGTGAAGAAAGGTGGAAGTATTTATAGAGCGGCACAAACCCACAAAGTGCCACGTAAGTCCCTCCGCAACTGGATGAAGCGATGCCACATAAAGTCATCCTTTCCGATGCCTCAACAGCTAAAACAATTCGTAGAAAACAGTAAAAAACAAAAGGAATACAAAAACTTCGACAATTTCACTAATACTACTGAGCCGCAACACTACGAGAAGAGCGGAACGGAAACGGAAGCCTACGAACCGGAAATGGATTTCGGGAAGCACTTCCTGTCGTTCACCAACTCGAACGTGTCTAGCGAGGACGAGGGACAGAAGAATGATAAGAATGAGGAAAGTAAAAATGATGATGGCAATACCGCTCTCAATATGTCATTGCACGAGTAG
Protein Sequence
MALPPQQFCVRWNSYHTNLQAVFPRLLLTEQFADVTLACESRQLRCHKLVLSACSAYLERLLLQNPCDHPIVLMRDMRFSEMQALVDFMYKGEVNVTQEELPSLLKSAEALQIRGLCSNDTSNLSSELGKPETKDFTVASEALVANAQRENAVNGPTNQHKSTQQHMSATTTNGTKKRKSEERAAEIKEETVEEDGLYYGELDNDNMEYQEDDEPGKPGSSLGQPSGRRPYLRVKPESELFFQNKLQHLAKVNSEYISRLSKMNATEIRNEFSKYGFNTNTEDPYSKSVDKAENDYYKSWLEQNGELEVSLLKANQVKKPKIDTKNQKSEVELIPKTKNSVAIKEILPKFVEKSQLRRRGRPPIFKDRNIDIGETVLKSDLDQFLEGKEVSSSGLSRKDLERVMMGKFNPNRRYSNEAMWAALMDVKKGGSIYRAAQTHKVPRKSLRNWMKRCHIKSSFPMPQQLKQFVENSKKQKEYKNFDNFTNTTEPQHYEKSGTETEAYEPEMDFGKHFLSFTNSNVSSEDEGQKNDKNEESKNDDGNTALNMSLHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01179610; iTF_01180432; iTF_01076675; iTF_00405181; iTF_01437219; iTF_01538915; iTF_00327204; iTF_00345956; iTF_01260261; iTF_00622118; iTF_00968167; iTF_01083497; iTF_00007255; iTF_01251972; iTF_00177322; iTF_01342348; iTF_00685602; iTF_00302278; iTF_00301342; iTF_00017477; iTF_01118469; iTF_01117491; iTF_01119516; iTF_00111806; iTF_00050087; iTF_00000490; iTF_00001306; iTF_01426044; iTF_00186414; iTF_01221738; iTF_00709393; iTF_00783667; iTF_01285699; iTF_00784534; iTF_01416979; iTF_01416025; iTF_00761820; iTF_01363256; iTF_01361793; iTF_01152313; iTF_01075643; iTF_01192859; iTF_01339073; iTF_00973923; iTF_00300388; iTF_01064806; iTF_00449320; iTF_00446369; iTF_00123522; iTF_00667683; iTF_01440227; iTF_00726596; iTF_01526212; iTF_00447398; iTF_00712070; iTF_00445352; iTF_00037961; iTF_00375466; iTF_00758410; iTF_00906314; iTF_00124427; iTF_01534091; iTF_00038988; iTF_00907180; iTF_01340364; iTF_00036973; iTF_00041038; iTF_00147662; iTF_00042801; iTF_00831377; iTF_00928849; iTF_01094194; iTF_00374356; iTF_01063892; iTF_01527477; iTF_01441238; iTF_01062967; iTF_00364184; iTF_00924920; iTF_01093272; iTF_00173211; iTF_00425595; iTF_01247259; iTF_01532252; iTF_00122557; iTF_00908061; iTF_00120670; iTF_00121599; iTF_00850920; iTF_00951976; iTF_01026473; iTF_01029409; iTF_01031269; iTF_01028458; iTF_00888414; iTF_01027486; iTF_00810252; iTF_00237901; iTF_00622981; iTF_01030384; iTF_00745938; iTF_00041939; iTF_00071638; iTF_01230774; iTF_00851962; iTF_00273755; iTF_00274557; iTF_00772158; iTF_01084414; iTF_00043711; iTF_00040031; iTF_00809311; iTF_01264830; iTF_01360830; iTF_00157347; iTF_00441667; iTF_00707116; iTF_01436253; iTF_00383842; iTF_00636642; iTF_01197924; iTF_00677798; iTF_00637831; iTF_00869800; iTF_00889385; iTF_00909001; iTF_00794804; iTF_00171981; iTF_00931599; iTF_01166863; iTF_00281521; iTF_00282566; iTF_00932787; iTF_01502228; iTF_00072217; iTF_00785337; iTF_01425245; iTF_00823168; iTF_01492192; iTF_00450303; iTF_01377633; iTF_00018304;
90% Identity
iTF_00622118;
80% Identity
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