Basic Information

Insect: Notocelia uddmanniana
Gene Symbol: Hr39_1
Assembly: GCA_905163555.1
Location: LR991052.1:4001944-4027829[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.073 1.4e+03 0.0 3.6 105 172 106 174 16 220 0.50

2 4 3.4e-08 0.00065 20.9 0.1 1 21 296 316 296 323 0.91

3 4 0.021 3.9e+02 1.8 0.0 77 117 341 378 322 389 0.80

4 4 8.4e-65 1.6e-60 207.3 0.0 201 408 397 613 347 613 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.073	1.4e+03	0.0	3.6	105	172	106	174	16	220	0.50
2	4	3.4e-08	0.00065	20.9	0.1	1	21	296	316	296	323	0.91
3	4	0.021	3.9e+02	1.8	0.0	77	117	341	378	322	389	0.80
4	4	8.4e-65	1.6e-60	207.3	0.0	201	408	397	613	347	613	0.85

Sequence Information

Coding Sequence: ATGGGTCTTCTGCTACTGGTGCATAGTGGCCATAGAGTGCGAGCTCTGACGCAGTTCAAGAGCTTGGACGACCAGAGAGCTCTGTACCTCAAGTACACGCCGCTGCAGCAGCGGAGCCTCAGCATTACGAACCAGATATCGGTGCTGACTGAGAGCGCGCCACTGCGTCGGCCATCATCCCCGGCCGCCAAGATGGAGCAGAGTCCACTGCTTCAGCCCCCGGGCGAGATACAGAACCTCACCATCAAGAAAGAGAGCCGGGAGCTGTCCGAACTGAAGTGCGAGCCTTCAGTGGGCATGGACAAGCTGCTGGGCGCTCTCCACGGCTCCCCACTGCTGGGCAGACTGCCCAGGGTCCAGTCTAGCGCTAGCACCGACTCTGCCGTACACTCCATGTACACACATAGTGTGTACAGCAGTCCGTCGGCCAGTCCGCGCGCCTCTCGACATTACACTCCGTCTCTCTCTCGCAACAACAGCGACGCATCGCACTCTTCCTGTTACTCCTATAGTTCAGAGTTTTCGCCCACACATTCACCTGTGCAGAGCCGGCACCCGCACGTGGTGTACAGGGAACAGAACCCCGTGTTCCCGGGATCGCCGCAAGATGATGAGGAGGCTGAGGACCGTCTCCACCACCACCAGGGGATCAGCAGGCAGCAGCTCATTAACAGCCCGTGCCCTATATGCGGTGACAAAATCAGCGGTTTCCACTACGGCATATTCTCCTGCGAATCCTGCAAGGGTTTCTTCAAGCGGACGGTTCAGAACAGAAAGAACTACATGTGTCTCCGCGGAGGGAACtgtcctgtcacggtcgccacAAGAAAGAAGTGCCCCGCGTGTAGGTTCGACAAGTGCCTTGGCTGTGGGATGAAGCTCGAAGCTATAAGAGAGGATAGAACGCGAGGCGGTCGCTCTACGTACCAGTGTTCGTACACGCTGTCGGGAGCCGTGTCGACTGGCTCTCTTCTGTCCGCCCCCGTGCCACCGACGCTACGGCACGCTTCAAGTCTAACATGCGTGAATGGTCCCGGATCGTACAGTCGCGGCGAGTCGAGTAGCAGCCGTCTAACGCCAGACATACCCCCGTTATTGCAGGAAATAATGGACGTGGAGCATCTCTGGCAGTACAACGAGACGGAACTGAGCCGGCTCGGCAAATCCGGCCTGAGCCCGTCGGCCAACCCGCTGCTGGCGGCCTCCGGCATCACGGCGCACAACTCCAGCCCCGACTTCCTGGCCGACCTGTGCAACATAGCCGACCACAGGCTGTACAAGATCGTCAAGTGGTGCAAGAGCCTGCCGCTCTTCAAGAACATCTCGATCGACGACCAGATATGCCTGCTGATCAACAGTTGGTGCGAGCTGCTTGTGCTCTCCTGTTGCTACCGCGGTGTGGGGACGGTGGGGGAGGTGCGCGTTGGGGGAGGGAGGGGCATCACGCTACAGCAGAGCGCCAAAATGGGTCTAACTCCGTGTATTGAGCGTATGCTGAGCTTCACCGACCACCTACGACGGCTGAAGGTCGACCGATACGAATACGTCGCACTCAAGGTCATCGTTCTCCTCACCTCCGACGCCCCGGAGCTGCGTGAAGCGGAGAAGGTCCGGGCGTCGCAGGAGAAGGCGCTCGCCGCTCTCCAAGCTTACACGGCCGCGCACTCGCCGGACACGCCCGCCAAGTTCGGAGAGTTGCTTCTGCGCATACCGGAACTGCAGCGGACTTGTCAGTTCTTCATGCAAGTCGGCAAGGAAATGCTGAATCCAGCGAACAAGAACAAAGATGGCGACGGCCCCAGCTTCAATCTGCTGATGGAGCTGCTCCGAGGTGACCACTGA
Protein Sequence: MGLLLLVHSGHRVRALTQFKSLDDQRALYLKYTPLQQRSLSITNQISVLTESAPLRRPSSPAAKMEQSPLLQPPGEIQNLTIKKESRELSELKCEPSVGMDKLLGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQSRHPHVVYREQNPVFPGSPQDDEEAEDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYTLSGAVSTGSLLSAPVPPTLRHASSLTCVNGPGSYSRGESSSSRLTPDIPPLLQEIMDVEHLWQYNETELSRLGKSGLSPSANPLLAASGITAHNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVGTVGEVRVGGGRGITLQQSAKMGLTPCIERMLSFTDHLRRLKVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTAAHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKNKDGDGPSFNLLMELLRGDH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00660411;
90% Identity: iTF_00660411;
80% Identity: iTF_01072637;