Nudd047962.1
Basic Information
- Insect
- Notocelia uddmanniana
- Gene Symbol
- arid5b
- Assembly
- GCA_905163555.1
- Location
- LR991076.1:4034277-4051411[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.48 2.1e+03 0.8 0.1 3 24 178 197 176 210 0.80 2 2 2.5e-11 1.1e-07 33.7 0.0 5 88 223 293 221 294 0.89
Sequence Information
- Coding Sequence
- ATGCACCTGAGATATGACACTGCTTGGTGCTTCCTTGAAGAGCTTGTGGTACAAGTGCTTAAAGAGCCAATGTGTGGTATTTATGCTCAAGAAGGACGAGACGAGGACGCAGACAGCCCCGGCGTGGTGGTGTTCTCCTACCCGCGCTACTGCCGCTACCGGGCGTTGGTGGCGCGACTGGAGGGCATCCAGGGCGACTGGTTGCGGGACAGCCTGGTGTGCGCGCTCGGTGGTTACGCGGCTCCCACTCGGAACACGAGGATACTGTACTGCAAGGACACATTCGAGTACCCGGAGCTGGAAGGGCACGAGTTCGTGTGCAACCAGCTCGCGCCGAAGCTGAAGGGGCGGCcgcgcgggcgccggcgccggcgcgccgaCAAGCACTCGCCCTCCCCCTCGGACCGGTCCAGCGACAGCGACACGCAGAAACGAGTCGAGCGGCCCGCTGAGCCCCCGCGCCGCCTGTCGCTCCGCAACGGCGCGCCGCGGTACAGCGATGACGAGGACAAGGAGCAGTGCGGCGAGGACCGCGCCTTCCTGCACCACCTCAAGCAGTTCTTCCGGGAGAGGAAGGAGACCTTCAAACCCGCGCACTCGTTGAAAGACCGTGAGTACTATATACTTCAGACACGAAAAAAGTGGCCGCCATTCTGGACTTTTTTGTTTAGTAGGCAGCTCAAGCAGTTCTTCAGTGAGAGGAAGGAGACCTTCAAACCCGCGCACTCGTTGAAAGATCTGTCCCTCCGCTCACTATACCAGTCTGTGATCAACTCTGGCGGCTACGAAGCGGCCTGCCGACACAAGTTGTGGCGGCAGATACACGCGCCCCAGCCCAACACCGCGCGCCGACACTACGAGAGATTCTTGCTAGCCCTAGAAAAACACGAAGTCTCCACCGGCGTTCGAAAGTTGCCCAAGCTGAACGGCGCAGTGGAACAACCAACGGTGACCATCGAGCTGCCAGACTCGAGGGAACCGAGCCCCGCACCGAGGGAAACCGATGTTAAGGACTTTAGCGTGACTTCGAAACCAGCTGAAGAATTAAATAGGGAGTTTCTAGAGTCGCTTCCACCTAAAGAAGAGAACAAGGTGAAAATAAGCGTGAAGCCGGTGGAGAAGCTTCTAGAAGAACCCAAGAAGGAGAAGGAAGAGCCACGAGAAGGGTTCTACTCGGAGCTAAAAACCAAACTTAATCTGGGCAATGCCGACAGCAAATTCCTGAGCGACATCGCGACAGCACAGCAGGAGTTGGTGTCCAGCAGCGCTCTCAGCTCGCTCTCCAGTCTCGTGAACGGCCACACGCTGCCTAAGGAACAGGCGCGGCCGCCCACGCGCAGCTCGCTGCGCGCCGTGCGCGTCAAgcccgcgcgcgcgcacgcgcaCCACCTGCAgcgcgcgcccgccgccccCACCCCCGCCACCACCCCCACCGCCACCGCCACCGCCACCGCCGGAACCACAACTCCCGCACCGCTTCGGTCTGACTCGGCGTCGTCGTCCCCGCCCGCGGCCCCCACCACCCCCGCGACCCCCGCGGCCCCCGCCGTCACCAACTTCGGCATCCAccacccgccgccgccgcccacaCACAGCGATGACGAGATCGTCGAGGTCCCGTACAAACCTAAAACACCAGAGATCATAGACTTGGACGAATATCCAGAAAGCCCACAAGCCATCAAGAAGAAAAAACTAGACATCCTCAAGGAACGAGGACTCGAAGTAACCGCCATCCCCACCACCGCTGCCTGGCCCCCCGCACCCACCACCCTCACCCCCCTAGTACCAGGGGCGTCCCTTGCCCCCCTAGTGTTATCGCCCGCCGTTCAACATCAAATCATGACGCAAGCGCAGATATTCCAAATGTATAACATCATCCCACCCAGCTACCCCAACGGGGCGCCACCTAAAGTCATCCAAGCTACCAGCGCCTTCGGATCTTCAGGACCTGAGAGAACCGTCTACGGGAACCCTAAGGACCCCTTCATGCCTCCCCCACATGTCCTACTAGGAACCCCGTTAAAACCCCAAAGGAATAGCTCAGTACCAATGCCGTCAACACCCCCGCAAGATATTCTAGATTTGACATGTAAGACGCTACCGCCAGGACAGAAACCCGCTGTAGAAATAGTCCGAATCCCAAGCGTCCCATCGCCATCCAAAGTCAGCCCCGCTCAGAATCTAACTAAAAACTACACTCTGGCAGACGGCAAGGCCATCGTCGGTTCAAACCTTGAAATAACGCTTGTAAACCCAAAAACACAGACGCCAACCAAGTCTAGACAGCAGAAACGGTCGTCGAACGGTAAATTCGTTGCAGCGAAAACACCAACACCACCAAAAGACTATCCTAAAACGTACACCAGCCCTTCACAGTCAGGGGCTAAGAAAGCACCAATAATAGTACCTAACTACCAAGTCAACCAACGAGACGATGTCTCTCCCACGTCGTCTACTGGCTCAGGAAACTCCCAGACGAATTTACTCCAAAACAACTTGCTGCAGAACGTATTTAAGGGTCAAAGCAGCTTGCAACAGATGATGGAGATGCAGAAAAATGTTCCTACAATGCCATACGTGGATCCTTACATGAGCGCGTTGTACAGCAGTCTCGCTGGCAGTATGGACCGGAGACAGTTAGCCATGTACAGAGACTTCATGGCAAATCAGTTCAGAGGATATTCGGGTCTATTAGGGGTCACACCCACAACGAAGAATTAA
- Protein Sequence
- MHLRYDTAWCFLEELVVQVLKEPMCGIYAQEGRDEDADSPGVVVFSYPRYCRYRALVARLEGIQGDWLRDSLVCALGGYAAPTRNTRILYCKDTFEYPELEGHEFVCNQLAPKLKGRPRGRRRRRADKHSPSPSDRSSDSDTQKRVERPAEPPRRLSLRNGAPRYSDDEDKEQCGEDRAFLHHLKQFFRERKETFKPAHSLKDREYYILQTRKKWPPFWTFLFSRQLKQFFSERKETFKPAHSLKDLSLRSLYQSVINSGGYEAACRHKLWRQIHAPQPNTARRHYERFLLALEKHEVSTGVRKLPKLNGAVEQPTVTIELPDSREPSPAPRETDVKDFSVTSKPAEELNREFLESLPPKEENKVKISVKPVEKLLEEPKKEKEEPREGFYSELKTKLNLGNADSKFLSDIATAQQELVSSSALSSLSSLVNGHTLPKEQARPPTRSSLRAVRVKPARAHAHHLQRAPAAPTPATTPTATATATAGTTTPAPLRSDSASSSPPAAPTTPATPAAPAVTNFGIHHPPPPPTHSDDEIVEVPYKPKTPEIIDLDEYPESPQAIKKKKLDILKERGLEVTAIPTTAAWPPAPTTLTPLVPGASLAPLVLSPAVQHQIMTQAQIFQMYNIIPPSYPNGAPPKVIQATSAFGSSGPERTVYGNPKDPFMPPPHVLLGTPLKPQRNSSVPMPSTPPQDILDLTCKTLPPGQKPAVEIVRIPSVPSPSKVSPAQNLTKNYTLADGKAIVGSNLEITLVNPKTQTPTKSRQQKRSSNGKFVAAKTPTPPKDYPKTYTSPSQSGAKKAPIIVPNYQVNQRDDVSPTSSTGSGNSQTNLLQNNLLQNVFKGQSSLQQMMEMQKNVPTMPYVDPYMSALYSSLAGSMDRRQLAMYRDFMANQFRGYSGLLGVTPTTKN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00289412;
- 90% Identity
- -
- 80% Identity
- -