Ccan034151.1
Basic Information
- Insect
- Cenopis cana
- Gene Symbol
- arid5b
- Assembly
- GCA_951800055.1
- Location
- OX637496.1:3348975-3366459[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.48 1.9e+03 0.4 0.4 3 24 230 249 228 264 0.77 2 3 0.74 3e+03 -0.2 0.1 3 21 256 274 254 279 0.83 3 3 5e-12 2e-08 35.6 0.1 3 88 282 354 280 355 0.88
Sequence Information
- Coding Sequence
- ATGGGTAGTTTGAGTTTTTTGTATGCCTTTTGGGACGAGGTTCTAGCGATAAACGACAAAGTCGTCCTCAAAGCGGAAGACCTTCTCTCCTGGGTGTGCTGCGGCGCCGACTGGCGCTGGGGGCTCCGGGCGGTCTGGCGCGGGGCCTGCGCCCCCCCGGCCACCCCGCGCCGAACGCAGCCCCTACACCACACCAGGCTGGACTTCAGCGACGTGGACCGCGAGAAGAGTTCCATAACCGAGGACGCCGACAGCCCGGGTGTGGTGGTGTTCTCGTACCCGCGCTACTGCCGCTACCGGGCGCTGCTGGCGCGGCTGGAGGGCATCCAGGGCGACTGGCTCCGGGACAGCCTGGTGTGCGCGCTCGGCGGGTACGCGGCCCCGACCAGGAACACCAGGATACTGTACTGCAAGGACACATTCGAGTACCCCGAGCTCGAAGGGCACGAGTTCGTGTGCAACCAGCTCGCGCCGAAGTTGAAGGGTCGGCcgcgcggccggcgccggcgccgcgccgacAAGCACTCGCCCTCGCCCTCCGACCGATCCAGCGACAGCGACGAGCAGAAACGTGACCAGCCCGATGAGAACCCGCGGCGCCGGAACCCGCGGCGCCTCTCCCTCCGCAACGGCGCGCCGCGCTACAGCGACGACGTCGACGAGGACAAGGAGCAGTGCGGCGAGGACCGCGCCTTCCTCCACCACCTCAGGCAGTTCTTCAGGGAGAGGAAGGAGACCTTCAAACCTGCGCACTCGTTGAAAGACCGCGCCTTCCTCCACCACCTCAAGCAGTTCTTCAGGGAGAGGAAGGAGACCTTCAAACCTGCGCACTCGTTGAAAGACCGCGCCTTCCTCCACCACCTCAAGCAGTTCTTCAGGGAGAGGAAGGAGACTTTCAAACCCGCGCACTCGTTGAAAGACCTGTCTCTCCGCACACTGTACCAGTCTGTGATCAACTCTGGCGGCTACGACTCGGCCTGTCGACACAAGTTGTGGAGACAGATACACGCGCCCCAGCCCAACACCGCGCGACGGCACTACGAGAGATTCCTGCTAGCCTTAGAAAAACACGAAGTGTCCACCGGCGTCCGAACGTTACCGAAGCTGAACGGAACCGTGGAGCAGCCGACCCTCACCATCGAGCTGCCAGACTCCAGGGAGCCCAGCCCCGCTCCCAAGGAGGAACTTAAGGACTTCAGCGTCACTTCCAAGCCGGCTGAGGAATTAAATAGAGAGTTTCTAGAGTCACTTCCACCTAAAGATGAGAACAAGCCGGCTGAAGAATTAAATAGAGAGTTTCTAGAGTCACTTCCTAAAGATGAGAACAAAGTGAAAATAAGCGTGAAGCCGGTAGAGAAGCTTCTAGAAGAGCCCAAGAAGGAGAAAGAAGAGCCACGGGAGGAGTTCTACTCGGAGCTCAAGAACAAACTTAATCTGGTGGCAGGCAACGCCGAAAGCAAGTTCTTGAGCGACATCGCGACACCACAGCAGGAGTCGGTCACCAGCAGCGCTCTCAGCTCGCTCTCGAGTCTCGTCAACGGACACACACTACCCAAGGAGCAGAGTCGTCCGCCCACGCGCAGCTCGCTGCGGCACGTGCGCGTGaagccggcgcgcgcgcaccactcccaccaccaccaccaccacaccaCCACCGCACCCCACCACCACCAGCCCACCACACCCCATCACCACCAGCCCCATGTGCCCGCCAGCAACACGCCCCTCCGCTCCGACTCTGCCTCGTCGTCCCCTCCCGCGGCCCCCGCGGCCTCCTCGGCCCCCGCGACCCCCGTGACCCCCGCGACCCCAACGACCCCGGCCGTCACCAACTTCGGCATCCAccacccgccgccgccgcctacACACAGCGATGATGAAATCGTTGAGGTCCCGTACAAACCGAAAACACCAGAGATCATAGACTTAGACGAATACCCGGAGAGCCCGCAAGCCGTCAAGAAGAAAAAACTAGACATCCTTAAAGAACGAGGATTGGAAGTTACCGCCATCCCCACCACCCCAGCCGCCTGGCCCCCCACTCCCACCCCCCTCACCCCCTTAGTCCCCGGAACGTCCCTCCCCCTTACCCCCTTAGTACTTTCCCCCGCCGTTCAACATCAGATAATGACGCAAGCACAAATTTTCCAAATGTACAACATTATACCACCAAACTACCCCAACGGAACACCTCCGAAAGTGATCCAAGCTACCAGCGCTTTTGGATCCTCTGGACCCGAGAAAACGGTCTACGGAAACCCTAAAGACCCCTTCATGCCGCCCCCCCATGTTTTACTAGGAACCCCAATGAAACCCCAAAGGAATAGCACGGTACAATTACCCTCTACCCCTCCGCAGGATATCCTAGATCTGACTTGTAAGACTTTACCACCCGGTCAGAAGCCGGCTGTAGAAATAGTCCGGATTCCGAGCGTTCCATCCCCGTCTAAAACCCCTAGCCCCGCTCAGAATCTAACGAAAAACTACACTCTAGCTGACGGTAAGGCAATCGTAGGTTCCAACCTGGAAATAACGCTTGTAAACCCAAAATCACAGACCCCAACGAAATCTAGACAGCAGAAACGGTCGTCGAACGGAAAGTTCGTTGCGAAAACCCCTACACCACCTAAAGATTACCCTAAAAGTTATACCAGCCCTTCGCAATCCGGGGCGAAAAAACCGCCCATCATAGTCCCTAACTACCAAGTGAATCAACGAGACGATGTATCACCAACTTCATCGACCGGCTCAGGGAATTCCCAAACAAATCTCCTGCAGAACAACCTATTACAGAACGTATTTAAAGGTCAAAATAGCTTGCAACAGATGATGGAGATGCAGAAAAATGTTCCTACAATGCCATACGTAGATCCGTATATGAGCGCGTTGTATAGCAGTCTCGCTGGAGGTATGGATCAAAGGCAGCTAGCTATGTATAGAGACTTCATGGCGAATCAGTTTAGAGGGTATTCCGGGCTATTAGGGGTCACTCCTACAACGAAAAATTAA
- Protein Sequence
- MGSLSFLYAFWDEVLAINDKVVLKAEDLLSWVCCGADWRWGLRAVWRGACAPPATPRRTQPLHHTRLDFSDVDREKSSITEDADSPGVVVFSYPRYCRYRALLARLEGIQGDWLRDSLVCALGGYAAPTRNTRILYCKDTFEYPELEGHEFVCNQLAPKLKGRPRGRRRRRADKHSPSPSDRSSDSDEQKRDQPDENPRRRNPRRLSLRNGAPRYSDDVDEDKEQCGEDRAFLHHLRQFFRERKETFKPAHSLKDRAFLHHLKQFFRERKETFKPAHSLKDRAFLHHLKQFFRERKETFKPAHSLKDLSLRTLYQSVINSGGYDSACRHKLWRQIHAPQPNTARRHYERFLLALEKHEVSTGVRTLPKLNGTVEQPTLTIELPDSREPSPAPKEELKDFSVTSKPAEELNREFLESLPPKDENKPAEELNREFLESLPKDENKVKISVKPVEKLLEEPKKEKEEPREEFYSELKNKLNLVAGNAESKFLSDIATPQQESVTSSALSSLSSLVNGHTLPKEQSRPPTRSSLRHVRVKPARAHHSHHHHHHTTTAPHHHQPTTPHHHQPHVPASNTPLRSDSASSSPPAAPAASSAPATPVTPATPTTPAVTNFGIHHPPPPPTHSDDEIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTAIPTTPAAWPPTPTPLTPLVPGTSLPLTPLVLSPAVQHQIMTQAQIFQMYNIIPPNYPNGTPPKVIQATSAFGSSGPEKTVYGNPKDPFMPPPHVLLGTPMKPQRNSTVQLPSTPPQDILDLTCKTLPPGQKPAVEIVRIPSVPSPSKTPSPAQNLTKNYTLADGKAIVGSNLEITLVNPKSQTPTKSRQQKRSSNGKFVAKTPTPPKDYPKSYTSPSQSGAKKPPIIVPNYQVNQRDDVSPTSSTGSGNSQTNLLQNNLLQNVFKGQNSLQQMMEMQKNVPTMPYVDPYMSALYSSLAGGMDQRQLAMYRDFMANQFRGYSGLLGVTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01072233;
- 90% Identity
- -
- 80% Identity
- -