Nudd020443.1
Basic Information
- Insect
- Notocelia uddmanniana
- Gene Symbol
- Rel
- Assembly
- GCA_905163555.1
- Location
- LR991059.1:10263323-10315281[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-33 4.5e-29 103.2 0.2 1 168 53 221 53 222 0.88 2 2 0.72 6.9e+03 -1.5 0.2 99 122 253 276 251 306 0.75
Sequence Information
- Coding Sequence
- ATGTCATCAAGCGACACAGTGAGTGAGTCGGCGTCCTCTCCGCTGTCGTACATGGAGTCTCCTCACCGGTCCCCATGCCAGCAGGTTCCGCAATTAACAAATTGCTTTACGGAGCTGACTTGTGCTGATCTCAATGGGTTCACAGACAGGCCGTTCCTGCGCATTGTGGAGCAGCCACAGGACCATTTCCGGTTCCGTTACAAGAGCGAGATGGTCGGCACCCACGGCTGCCTTCTCGGGAAAACCAGTTCCAGCAATAAGACCAAAACGCACCCTATGGTCGAGTTGGTGAACTACAACAAACGGGCACTGATCCGGTGCCGGCTGGCGCAGCATCTTAAGCCGGACGAGCATCCTCACCAGCTGCTAGAAGACGAGCAGGAGGACCGCGATGTCAGCGCTGAGGTGCCGGAGCGAGGCAGCTACCGAGTTGGATTTGCTGGCATGGGTATCATCCATACAGCTAAAAAAGATGTTCCCGCTTTGCTGTACAAGAAATACAAAGAAAGACAAAAACTTATTGATAATAGAgagctCATGAGTTACTGTGAGACGGAGGCGCGGGGGATAAATTTGAACATCGTGAGGCTGAGGTTCAGTGCTCACGACATCGAGACTGATCAGGAGATCTGCGCACCAGCTTTCTCCGAACCTATACACAATATGAAAAGCGCGGCAACCAACGACTTGAAGATATGCCGTATAAGCAAATTCTACGGGCGGCCCAAAGGCGGTGAAGACGTTTACATCCTGGTAGAGAAAGTTAATAAAAAGAACATCGAGATCCGGTTTGTGGAACGGAACGAAAACAACGAAGAGGTGTGGTCAGCTAAAGCACACTTTCTTCAGAGTGATGTGCACCACCAGTACGCTATTGTGTTCAGGACTCCGGCCTACAAGGACCAGCAGATTACAAAAGACGTAAAGGTGTCGGTTGAATTGGTCCGGCCCTCAGACGGCCGCAGCAGTGACCCCAAGGATTTCACGTACAGGGCCGACCCGCTCACCAAACATAACAAGAAGAGGAAGGCTAGTTCGCAATCGCCGTACGATTCATTCAGCAGCACCGGATCGTTTGGATCCATCAAAAGTTATGGTTTGCCAGCCACGGTGATTGAGTTAAATCAACAGACTCCTAAGTCGACGGAAGAAAATGATTTTGTAATGAATCTAATGATGCCTAATGCCGTACCGGTAATGATGGACACACAAACACAAATGAACGCGGACCTAGGCGACGCCCTAATGAACATGGCCTGCGATCCTGACCACAGTCAGAGTCCCCTGCAATTGCAGTGCACTGTGAGCCCAATGCTGCCACAGGCCGATCCACCGACCTTCAGCTTGAGCTCTACTGAGTTCACGAACATTCTGATGGCGGATTTACAGCCGGAACAAAGGGATGATTTTAGCGAATTATGCCGCCAGTACATGACCCCATCGATGAACGAGTTCTTGCAGGACCGGTTGATAGAAGACTCGGGCCGCGGAAAGGCTACGGTCCAAATTAACAAGGTGCAACAgaaacaatcgaatgctcagcCTGTTCAAACAGGGAAGAGCCAAAATACAACGGACAAGTCGAGCGGCGAGTATACCGCCGTCTACACGCCGGAACACGGAATGGAGGTTAAGAAACTTGTCAAGGAAATATGTGATATGATCAGAACGAAGGCAGGCTTCAAGAAGCAAGTTGTCAAAGATAAATTGGAAAGGCTTTTCGCGATGCGCTTGTCGAATGGAGATACTTTCCTTCACATGAGTCTGTACAACAACAGAATCAGTTTCGAGTACATAGTGAAACTCCTGCACACGATGAAGATGCACCACCTGTTGAACCTGTCCAACGACCTCGAGCAGACCATCCTGCATTCCGCCATCATCAATGACCTGCCGCAGATGGTGACCGTTCTGATAGCCAACGGTTGCGACCCGATGATCGGCGACCAAGATGGCAACAACGCAGTTCACTACGCGGTGCAATATGGCGCGTGCTTGCAACCCCTGCTGGAGGCCATCAGGGCGAACAAAGTGTCCTGCGATCTCAACGCCGTCAACAAAGATAAGGATACCGCTCTTCACCTGGCAGCCGTTCCCGGCAACGCACCATCAGACGTCGCAGCAGCCTTGCAGTCGATACAGCTGCTCTTGAAGCATGGAGCTAGTTACAACGCGCGCGATGCCGAGGATCGAACACCTCTACACGTCGCCGCCTACGACGACCGTCTACCTGTTGCGAGAGTTCTACTCGACCATATACCCGAGAGCGACATCGATGCGGTGGACGGGCGCGGATATACTGCCTTGCAGATTGTGTGCGGAGGCGAAATCAGAGAAAACACCATCGAGTTCATGAAACTACTTATTGCCAAAAAGGCGGACCCGGACACGCACGAGCCGCACACAGCGGCCGCGCGGAGCCTGTCGCGCGACAAGCCGGCGCTGCGCGACGCGCTGGCCGCTCTGTGCCCGCACGACGCCGATGTCAAGTCGGAGCCCGAGGACGAGTACGAGTCCGCCGAAgagGATGATACGTGCCTGAGCGAGGTGTCGCTGTACGGCGCGGAGCTGGCGGCGCTGCTGGACGCGTCGGGCGCGTGGCGCGCGCTGGCCGCGCGGCTGCGGCACGACGCGCTCGCCAACTGGTACGAGAACACGCCCAGCCCCACGAGGACTCTGCTGGCGCAGCTCAGGGAAAGCCAGGACGGCATAACCTCGAAGTCGCTGATGCTTATTCTGGAAGACCTGGGCCAGCTGGAAGCGGCTCGGATCATCCGAAGCAGGATCGGCGCTCTCGACTAA
- Protein Sequence
- MSSSDTVSESASSPLSYMESPHRSPCQQVPQLTNCFTELTCADLNGFTDRPFLRIVEQPQDHFRFRYKSEMVGTHGCLLGKTSSSNKTKTHPMVELVNYNKRALIRCRLAQHLKPDEHPHQLLEDEQEDRDVSAEVPERGSYRVGFAGMGIIHTAKKDVPALLYKKYKERQKLIDNRELMSYCETEARGINLNIVRLRFSAHDIETDQEICAPAFSEPIHNMKSAATNDLKICRISKFYGRPKGGEDVYILVEKVNKKNIEIRFVERNENNEEVWSAKAHFLQSDVHHQYAIVFRTPAYKDQQITKDVKVSVELVRPSDGRSSDPKDFTYRADPLTKHNKKRKASSQSPYDSFSSTGSFGSIKSYGLPATVIELNQQTPKSTEENDFVMNLMMPNAVPVMMDTQTQMNADLGDALMNMACDPDHSQSPLQLQCTVSPMLPQADPPTFSLSSTEFTNILMADLQPEQRDDFSELCRQYMTPSMNEFLQDRLIEDSGRGKATVQINKVQQKQSNAQPVQTGKSQNTTDKSSGEYTAVYTPEHGMEVKKLVKEICDMIRTKAGFKKQVVKDKLERLFAMRLSNGDTFLHMSLYNNRISFEYIVKLLHTMKMHHLLNLSNDLEQTILHSAIINDLPQMVTVLIANGCDPMIGDQDGNNAVHYAVQYGACLQPLLEAIRANKVSCDLNAVNKDKDTALHLAAVPGNAPSDVAAALQSIQLLLKHGASYNARDAEDRTPLHVAAYDDRLPVARVLLDHIPESDIDAVDGRGYTALQIVCGGEIRENTIEFMKLLIAKKADPDTHEPHTAAARSLSRDKPALRDALAALCPHDADVKSEPEDEYESAEEDDTCLSEVSLYGAELAALLDASGAWRALAARLRHDALANWYENTPSPTRTLLAQLRESQDGITSKSLMLILEDLGQLEAARIIRSRIGALD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00658130; iTF_00654007;
- 90% Identity
- -
- 80% Identity
- -