Basic Information

Insect: Nomophila noctuella
Gene Symbol: -
Assembly: GCA_958496325.1
Location: OY292492.1:12780813-12793376[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.7 3.8e+02 2.5 0.2 1 23 90 113 90 113 0.90

2 17 0.1 8.3 7.7 0.0 2 23 142 164 141 164 0.94

3 17 0.78 63 4.9 1.6 2 23 387 409 386 409 0.96

4 17 9.7 7.8e+02 1.5 0.1 1 19 417 435 417 437 0.86

5 17 0.66 54 5.1 0.2 2 23 448 469 447 469 0.95

6 17 0.023 1.9 9.7 3.2 1 23 517 540 517 540 0.93

7 17 0.25 20 6.5 1.4 1 23 553 576 553 576 0.97

8 17 0.058 4.6 8.5 0.2 2 23 623 645 623 645 0.86

9 17 3.7e-05 0.003 18.5 1.9 1 23 724 746 724 746 0.97

10 17 5.1e-05 0.0041 18.1 2.3 1 23 753 775 753 775 0.98

11 17 9.5e-05 0.0076 17.2 2.3 1 23 780 802 780 802 0.96

12 17 0.00017 0.013 16.5 0.7 1 23 808 830 808 830 0.98

13 17 3.4e-05 0.0027 18.6 1.1 1 23 836 858 836 858 0.94

14 17 0.00019 0.015 16.3 1.0 2 23 865 886 865 886 0.98

15 17 0.0025 0.2 12.8 0.6 2 23 895 917 894 917 0.97

16 17 0.0032 0.25 12.5 0.5 1 23 922 944 922 944 0.97

17 17 1.4e-05 0.0011 19.9 1.1 1 23 950 973 950 973 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.7	3.8e+02	2.5	0.2	1	23	90	113	90	113	0.90
2	17	0.1	8.3	7.7	0.0	2	23	142	164	141	164	0.94
3	17	0.78	63	4.9	1.6	2	23	387	409	386	409	0.96
4	17	9.7	7.8e+02	1.5	0.1	1	19	417	435	417	437	0.86
5	17	0.66	54	5.1	0.2	2	23	448	469	447	469	0.95
6	17	0.023	1.9	9.7	3.2	1	23	517	540	517	540	0.93
7	17	0.25	20	6.5	1.4	1	23	553	576	553	576	0.97
8	17	0.058	4.6	8.5	0.2	2	23	623	645	623	645	0.86
9	17	3.7e-05	0.003	18.5	1.9	1	23	724	746	724	746	0.97
10	17	5.1e-05	0.0041	18.1	2.3	1	23	753	775	753	775	0.98
11	17	9.5e-05	0.0076	17.2	2.3	1	23	780	802	780	802	0.96
12	17	0.00017	0.013	16.5	0.7	1	23	808	830	808	830	0.98
13	17	3.4e-05	0.0027	18.6	1.1	1	23	836	858	836	858	0.94
14	17	0.00019	0.015	16.3	1.0	2	23	865	886	865	886	0.98
15	17	0.0025	0.2	12.8	0.6	2	23	895	917	894	917	0.97
16	17	0.0032	0.25	12.5	0.5	1	23	922	944	922	944	0.97
17	17	1.4e-05	0.0011	19.9	1.1	1	23	950	973	950	973	0.98

Sequence Information

Coding Sequence: ATGACTTCCGACGAGTCTGATGATGAACCACTGTCAGTGTTAGCTGCCACCAAGAAAGAACATCCTGAAAAGTTTAAGATTTTTGAATCTTCTGCAATAGAGGTCGTGCCGATCcgtaaaaagaagaaaaagaagaagaagaagcttCTAGAAGCTGATAGTCTTGCTTTAACAATAAATCTGTGTAAGAACAAGCCAGATATCAAAGTGGTTGAAAGACCCGCCGACGTTTGGTTGTATATGAAAGATTTGAACCCAAGTGGACCATATAGTTGCTTATTGTGCTCCTTCTGGTTCATAAACAGAGCTAAACTAATTATTCATTACGTTTTGAACCATAAGAAGGATTTCTGTGGGATTTGCAGATATTTTGTTCCAGAGAGGGAAGATTGGTATAATCATGCTAAGTTTCACACACCATGGCCTTGTTCTCAGTGCGCAGAGACTTTTCCCACTGAAGCAGAAATCCGGAGTCATTTAAGCGTCGCTCACAATCTTGTACACTGCCGACTTTGCCACTTCCGAACATCTGATGATGAACAGTATGACACTCACCTCTTCCAAAAGCACAATGTCTTGAATGTGGCTAACAAAAATGCTGAGCCTATGTGGGAACTCCAATATGATGAAGGAACAAACAAATTCCTTTGCCTACTTTGCTCCAAAGGGAATAACTtaacgacaatattttttagcCATTACATGGGCTATCATCACTTCACACTTAAATGTCTGACTCAAATTATATCAGGTAATGATGCTCCGTTTAGTGTTGAAGGTGCTAATGTGAGCTCAGACTTCATTGAAGTTCAGTTGAAGAATGAAAAGATTGGTTACATAGACATGGATAAAAAAGCTGAACCAGTAACGGAAGAGCAGGTAGATGCTGCAGCTCTAGTTTTGGTCCCAGAAATAAAGCAAGAAATAGCAAGTGACAATGAAGAAGAAATGGATAATGATTTGACTAATAAAACTGATACTTTGAGCACCTACAAAGGAGAAGAAGACTTTGATGTCACTCTAATAGAGTTGATAGTCCTTCAAAAGAGTTATTATGACTATGTCAACAGGACTCTTAGTTACATCAATTCAAACACACTAGCTGATGAGACTGGGCTGGATTACAAAAGCTTGAAGAAAGATTTTGGTGTAGACGTGACTTGTTCCTTGTGCAAAACGAGGGTCAATTCGGTCCACACTTATGTAACTCATATGTCTAAGATTCATTCCATAAAGTCAGTGCCACTTTATTCTTGTAGAGTGTGCGCAATGTCTTTTGACGCTCGTAATGAGTTTGATAGTCATGTATCAGATGAGATGGCTTTGTTTGATGACTTGTGGATCTGTCAGTTTTGTGATGATGAATTTGACAGTAGAGAGACTGCgagaaaacatttaaatgaaCATTGGGATGCGATTGAGTATGACAACTGCTTCAGCCCACACTTAGGGTTTAAGTGCAAATTCTGTCCGACACTCTTTTGGAATGAAACGGACAGGGAGACTCATCATGTTAGAGTGCACTACAGTAATCACAAGAAAGATTTTTATAAGTGTCAGAACTGTGCAGAAACTTTTAGTGATAAGATATGGTTCATCCACCATCATTTGGACAGACATCAAGCAGCGATCGCAAACAACGATGTCATGTTCCTCTTCAAATGCCACCTGTGTAGTCTTGCCCTCAACTCCATCGAAGACATGAGAACTCATTTCAACACGGAACATCCTGAAGCGAGGAAGATCTTCTGCACTCTCGGCTCATGCTTGTACAGGCCTCTTAGCCAGCGCAAGTCGTTTAAACTGCATGTTAAGACATTCCACGCAACGGAGGGGCGCAGCGCCGCCGCGGACGGGGGCGCGGCGTCGTGCCCCATCTGCGGGCGCGAGTtcgccagcgcgcgcgcgtgcggaGCGCACATGTCGCAGGCGCACGGCACTGGCAAGTTCAAGTGCAAGCTGTGCAGGGAGGTCATGCATACCATGGATGAGAGCTAcgatggctacaaaaccaacggtCGCGAGTTCGctagcgcgcgcgcgtgcggaGCGCACATGTCGCAGGCGCACGGCACCGGCAAGTTCAAGTGCAAGCTGTGTCGGGAGGTCATGCATACCATGGATGAGAGAAAGCTGCATTACCTCATCCGGCATCCGGGCAGACATCCGTTCGAGTGTACGGAGTGCGGCAAGTCGTTCCAGTACAAGTCATCGCTGTACATGCACAAGCAGGAGCATTCGCCGAACAAGCAGAACTACACTTGCACTTACTGTTCCAAGGTGTTTATGAAAAAAGACTCGTTCCGCGAGCACCTGCAAATCCACGAGGGACCCCGGCACGCGTGCTCGTACTGCCCGATGCGGTTCGTGCAGCGCTCCAACATGCTGCGGCACGAGCGCCGGCACACGGGCGAGCGGCCCTACGCCTGCCCGCAGTGCCCGCGCACCTTCGCCGACAAGGGCGCCTGCACCTCGCACCTCAGGACACATACCAAGGATAGATCTTACGCTTGCATATACTGCGGGCAGACGTTCGTCCAGAAGTCTAAACTGACTTACCATATTAGAAAACATACGGGAGAAAATCTCGAGACGTGTCCGGTGTGCGCGAAACTGTTCACGAGCGCGTGTTCGTTGCGCGAGCACATGCGGATACACGACCGAAATACCCTGGAGCTAGTACAGTGCCCTCTATGTGATCGCAAATACCAGAACGGGCGGTACATGATGCGTCACCTGCGCACGCTTCACAACAAGGAGCGCTTCTCGTGCCCGCTGTGCCGCAAGTCGCTGACCAGCGTGGCGGGGCTCAGGCACCACGTCGTCACGCACGGCCGGGCTAATATGTACaagTGCAAAGTATGCCCAAAAACGTATGCAGTCAGAAGAACTCTAATGAAGCACCTGCGAATACGGCACGGCATCAAGACGTCCGATCTCAACGTGAAAGACTATTTCCAGCGGCTCGACCCTCGCGAGTGCAACCTTCCTCTAGACGAGGAGACCATCACCAAGATCTTCGGACCTCCACCGAAGAAGACCAACAACGATATCCTTCTTGGAGACTTTGTGACATTTACCAAAACTCTTAAGATGGCGGCAAATATGGACAGTGCGAAGGATAAtgaaggtgatgatgatgacgatgatgaggAGCAAGATAAGGAGACTGGCGAGGAAAGTGAGGGGGAGGGCAGGTTCAGGGATGAACAGGAccacgatgatgatgatggggagCTGGAGCCTACTGATTTTGTCAGTGTTAAGATTGAGCATGTCGATGAGGaggaggaagaagaagattattag
Protein Sequence: MTSDESDDEPLSVLAATKKEHPEKFKIFESSAIEVVPIRKKKKKKKKKLLEADSLALTINLCKNKPDIKVVERPADVWLYMKDLNPSGPYSCLLCSFWFINRAKLIIHYVLNHKKDFCGICRYFVPEREDWYNHAKFHTPWPCSQCAETFPTEAEIRSHLSVAHNLVHCRLCHFRTSDDEQYDTHLFQKHNVLNVANKNAEPMWELQYDEGTNKFLCLLCSKGNNLTTIFFSHYMGYHHFTLKCLTQIISGNDAPFSVEGANVSSDFIEVQLKNEKIGYIDMDKKAEPVTEEQVDAAALVLVPEIKQEIASDNEEEMDNDLTNKTDTLSTYKGEEDFDVTLIELIVLQKSYYDYVNRTLSYINSNTLADETGLDYKSLKKDFGVDVTCSLCKTRVNSVHTYVTHMSKIHSIKSVPLYSCRVCAMSFDARNEFDSHVSDEMALFDDLWICQFCDDEFDSRETARKHLNEHWDAIEYDNCFSPHLGFKCKFCPTLFWNETDRETHHVRVHYSNHKKDFYKCQNCAETFSDKIWFIHHHLDRHQAAIANNDVMFLFKCHLCSLALNSIEDMRTHFNTEHPEARKIFCTLGSCLYRPLSQRKSFKLHVKTFHATEGRSAAADGGAASCPICGREFASARACGAHMSQAHGTGKFKCKLCREVMHTMDESYDGYKTNGREFASARACGAHMSQAHGTGKFKCKLCREVMHTMDERKLHYLIRHPGRHPFECTECGKSFQYKSSLYMHKQEHSPNKQNYTCTYCSKVFMKKDSFREHLQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPQCPRTFADKGACTSHLRTHTKDRSYACIYCGQTFVQKSKLTYHIRKHTGENLETCPVCAKLFTSACSLREHMRIHDRNTLELVQCPLCDRKYQNGRYMMRHLRTLHNKERFSCPLCRKSLTSVAGLRHHVVTHGRANMYKCKVCPKTYAVRRTLMKHLRIRHGIKTSDLNVKDYFQRLDPRECNLPLDEETITKIFGPPPKKTNNDILLGDFVTFTKTLKMAANMDSAKDNEGDDDDDDEEQDKETGEESEGEGRFRDEQDHDDDDGELEPTDFVSVKIEHVDEEEEEEDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961214;
90% Identity: -
80% Identity: -