Nnoc004102.2
Basic Information
- Insect
- Nomophila noctuella
- Gene Symbol
- -
- Assembly
- GCA_958496325.1
- Location
- OY292484.1:12296532-12305168[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0043 0.34 12.0 1.0 3 23 354 375 353 375 0.96 2 23 0.3 24 6.2 0.3 1 22 761 782 761 782 0.95 3 23 5.9 4.8e+02 2.2 0.3 1 22 823 844 823 846 0.82 4 23 0.029 2.4 9.4 2.3 2 21 856 875 855 876 0.94 5 23 0.2 16 6.8 0.1 2 23 884 906 883 906 0.90 6 23 0.0056 0.45 11.7 0.2 3 23 927 948 925 948 0.96 7 23 0.00069 0.055 14.5 2.4 1 23 954 977 954 977 0.95 8 23 0.11 8.9 7.6 0.0 1 23 1003 1026 1003 1026 0.90 9 23 0.017 1.3 10.2 3.4 1 23 1031 1053 1031 1053 0.97 10 23 0.015 1.2 10.3 0.2 1 23 1059 1082 1059 1082 0.95 11 23 0.00092 0.074 14.1 1.3 1 23 1096 1118 1096 1118 0.98 12 23 0.0013 0.1 13.7 4.0 1 23 1166 1189 1166 1189 0.96 13 23 0.029 2.4 9.4 0.8 1 23 1252 1275 1252 1275 0.95 14 23 0.00097 0.078 14.1 2.1 2 23 1294 1316 1293 1316 0.95 15 23 0.077 6.2 8.1 0.1 2 23 1322 1344 1321 1344 0.93 16 23 0.0087 0.7 11.1 0.2 1 21 1389 1409 1389 1410 0.95 17 23 0.0011 0.087 13.9 0.6 1 23 1421 1443 1421 1443 0.93 18 23 9.9e-05 0.008 17.2 0.3 2 23 1536 1558 1536 1558 0.93 19 23 2.9e-07 2.4e-05 25.1 1.4 3 23 1565 1585 1564 1585 0.98 20 23 0.13 10 7.4 0.6 3 23 1606 1626 1604 1627 0.94 21 23 0.11 8.6 7.6 0.0 1 23 1649 1671 1649 1671 0.97 22 23 0.024 2 9.7 0.6 1 23 1677 1700 1677 1700 0.95 23 23 0.00022 0.018 16.1 0.4 1 23 1708 1731 1708 1731 0.96
Sequence Information
- Coding Sequence
- atGAGTGTGAATTATGATAGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCCGTTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCCTCAAAAATCAAGGATTGTGTCTCTGTACAGATAAGCGAGAATGACGACCTGCCAACGAATGTCTGCAGGAAATGTGTGGATAATGTCAACAATTGGCATATTTTCAAGTCAGTATGTGAAAGGACACAAAACAAACTAGAGTTGCTGATAAAAAAGGATGGCAGCCAACTAGAAGAGATACAAATAAAGAGTGAACCTTTGTTTGATGAGGCATATGATGATGGAGTGGCTATTGATGGAGAATACCCAGATGCAGACAATGAGAATATCGCTGGTTCCAGTAAGGTGCAGCCAGAAGGCCCACCGATACTGGCATCACTGGGCCTCACTCCACGAAGTGATAAGAAAAATGTAGACCCTCGAATGGACTGGCAACGGGTCCATGCAATATTGAACATGGTCCAAGACGATGATGTCATTGACTCACTGCAGTCCATCGAGGAGTGTGATGTTGTCCAGCAGTCAGATCACAACTCTGAGTCGGAAGCTGAATTGGAAGTTGATATCGATGACAGTTATGTTGACTGCAAGAATGGATTCATGAGCAGGAACAGGAAAGTCATATCTAGACATCCAAAGTTATCAACGTcacaaaataatgcaaaaatcAAAGAAGCCTCCAGATTGAAGAAACGGAAACTGGAAACAACAAAACACTGCCCTCTGCCCAAACAAGCCTGGCAATTACTGTTCTCAGATGATCTACTTGAGTTAATTGTTGCGTCTACAAATGATAACATACTAAAAACTGGAAATACTATTTCCGTCTCAACTAATGGGGCGGAGAGTGAGAAAGATGAGGAGGATGACGATGACGAAGACTTGAACGAGCCGGTTCAGTCGTTCACGAAAATGCCGCACATGCCCGAGGTGTCCATCACTGTGATGCGACCCTCCGGCGAGACGCTGCAGTCCCGCCAAGGTATTCAGCAGCTCGCCTCCAAAGATTGCCTCGTATGCGGCCGGTCCTATAGGTACTCCCACAATGCAAGGCGTCACGAGCTCACCGCTCACAGTTTTGATAGGTACACAAATAAGGTCATGAATAACAAAAAACCTCTACCGCAACATATGCAACCAAAACTAAGACCAAATCCATTTAATCCTAAAGCGCGCTTAATGCCGAACCCGATCAGCCACAAAATGCAGTTGATGGCAAAACCGATGCCTCAAAAAATTATACCGCACAAAGTTAATCCACCAAAACCAATACTCGTCAAATCTGGTAAAGGACCCCAAAATAATTTGCCGTACCCTCTACGCATAAAGGCGTTAAAAGATTTACAGATAAAGAAAAAGGAGCCGCAAATTTTGAAAACTCTTCTAACATCGAAACCAGAAGTCTTGGTTTCAGAACCAGAAATATTAAATTCCGGTCCCGAAAGTCCGGAGACATTGATTTCTGAACCGGAAATCGCATCTTTCCAAGTTGAGACTATTTTGTCAGAGCCTGACGGTTACGATCAACAAGCGGGCGATGATGAAATGGACGGTGACATGACGaataatcaaaatcaacatTATGATACGGTTGATATGGATTCAGAAAATGAAATTGAGATTGCCCGAGAGCAAGAAAATGATGAAGAAGATCACGATCAAGCTGCGGAAGCAGATGACAATAATCAAAATGATGAAGAAAATAATCATTATGAAGGACAAAGTGATACCGAAAAGGATAATGGCGAGGAGAATGCAGGAAATGAGGAGCACATCGGAGTGGACGAAAGTGATATTAATAAAGCTGAGCAGGAAATGGGTGATAATGAAGAAGGCAATGAAGAAAGAGAAAATGAAGAGCAAGATATGAATCACGATGACCATatggacgatgatgatgacgatcttCCACCAATGGAGATCGCTCCAGTAGTGGAAATAAATGAAGATTTGCAGACTAACTCTTACAGTGAAATGAATGAAGAGGAAGAGGAAGAAGAGCTCGATGAAACTGCGGACATGAATGACACCGCAGCTGAAGAAGAAGCTCCCAAGGAACTCGACCCAGATAAGTTGTATGTTACAAAAACTCAAAGAGACTTCATTAGCAAATATCGTGATATCATCGAACAGATTAATACAAAACGTTGTTTGTGCTGCGATAGGGAACATCCTCGTAGAAAGGCTGTTATCCAACATTTGCAAAAGAATGGGCATAAGGTGCCCAAGCATACTTGTTACAACTGCGTTGTAACGTTCGGGCATATTGGAGCTTTACTAAGCCACATGAGATCCAACAGCTGCACGGATTTGTGGAAAATAATCTACAACGAAAATGGCATAACCGACGATTTAGTCTTGGAAGAACCAAAGGATAATAAAGTTCAATATAAAGATATCTTCAACGCTCGCTCATACGCATGTAAATTATGCCCTGCTAAATTCCAACTTAAGCAGTTTATCATGAAGCACGTTTTAGATGTTCACGAAGATGGCCAGTCTAGAGTGCCTTTGCACTGTGTGCATTGCAGAGCACGCTTCAAAGACaagagtttaattaaaaaacacattCGTAACGGGGAATGCACTGTTGACATTTCTTGTGACTTGTGTTCAGAGAAGTTTGTGAATATGCAGGATTTCAATAATCACGCCTTGGCTGTTCATGCCGGTAGTTTCGACCAGTCTGATAATCAAAACAAGTGTGTCGACGGACGTCCTACAGACTGCCCTATATGTGGAAAGAAGAATAGTAGCTACCCGAATTTGGTGAAACATTTGAAGATATATCACGACGAGGAGAAGCCTCACTACTGCCAGCACTGTGATGCCAAATATGAGCAAGCTTCCGATCTTAACAAACACATTTATATGGAGCACTCTGATAGAACTTTGGGTATGCAACCTACCGAACCAGACATGTCTCTGGTTAAAGAAGAGCAAGAGGAGTACCACTACTCCTGCACAGAATGTAACGCCATATTCGAAACAGTCGACGCTTGGACCGATCATCAGGTTGCGGAACATAATCAAATCGCTCATCACTGCGATCAATGTGAAAAGAAATTCTTAAGACCCTCCGAACTCGCCGAGCATAAGAACACCCATTTGCGCGTGAAGTTCTATCCGTGTAGCGTTTGTTCTAATTCGTACAGCACCCCGCAAAAGTTGTCTGAGCACGTCCAGCAGGCGCACCCCGGCGTCGGTCCATTCCCCGGCACGTTGGAGTCGGAGTTCTACTGTGACATTTGCATAAGGTCATTCAAGAGTCGCCAAGCTTACTCTAATCACATGCGTATCCACGCGAAAGTACCCACCACTAACAGGAAACCGGGTGATCCCAAAGGGTTCTCGCCGAAAATTATCGGTAAGCCGATCAAACAATTTGTCGATGATATGCAAGTTGTGGCGTTCAAACGAAATTATAATGTTCCTAATGCTCCTTACTGTTGTGATATATGCGGAAAAGGATTTATgcacaagaaaaatatttggaagCATAAGAAAGTATTACACGCTGATCTACTCAACGACATCAGGAACGATAGTGAAGAGAATACCATGCACGCGTCGACGGAGGAGGACGAATATAACGCTGATGAAAACGGCGCTGTACTTTCTACGCCTCAATTCAACAGTTTTAACTTTACCAATTTCACTAATAATATTCAACCCCAAGTACAACAAGCGGAGGCTATGTCGTTCGCGTGTGACATATGTTTCAAACGATTCCCACTGCGCACAAGTGTGTGGAAGCACAAACGAGCCAAGCACGGTATTGTCGGTAATGATAATCGAGGGCAACCAAACGAAGCCGGGAGCAGATCGAGTTGTACAATttgtaaaattacattttcagACAAAAAGTCTTACTACCGCCATAGAAAGAACGTCCACAAATCGTCCTCGCAGATGTGCAAAATTTGTGGAAAACCACTTAACTCGACCTTGGAATTGTATGAGCATCTAAAAGCGGCACACGCGCGCGAGCTCCTTGGCTACAACGCAAATCAAGGGAGCTCGAGCAAGATCCAAGAAATTAAACCAGACTTGGACGTCGACTACGAAAACGATCAAGATTCCGTCGACCCCAGCGTCGAATATCAGGCTAGATATCCCTGCGACACGTGCGGCAAACAATTCGTCGGCCTGCTTGCGCTGCAAAACCACCAGTGCATCAACCAGCTCCAGTCGCAGCAACCCCAGACGTTCGACTGCGAAATATGTCACAAGAGCTACACCTCCATAGCGGCCCTGAAGAGCCACCGCGGCTGGCATCTCCGGTCGCCGGACGGGAAGGCCGCCGCCAACAACTCCGGGCTGTGGATGCCGCAGCACAAGGTGACCAGCAAGGTCAGCAAGCACGAGGTGGTGGACCCGTCCCAGCTCGCCCGCGTCACGCACTCGACGCCGGTCGCGACGGCCGTCACCGCCAAGCGGCGCCTCCCGCCGGAGGTCGAGGTGACCGTCGTGAACCCGAACAAGAAGCTGCGCTCGGACGACTCGGTCGAGATCGAGCAGCACAACAGCATGTCCGGGAGCGTCGAGGACCGGTACTGCACGATATGCGACAAGGAGTTCACGAAGCGGGCCGCGTACCAGCGGCACATGGACGAGGTGCACCAGCCGAACTCGGTGTTCTGCCCCGTGTGCGACAAGAGCTTCACGCGCAAGTCGACGCTGCTCGTGCACATGAAGAAGCACTACGAGAGCGGGTCGGGcgggtcgggcggcgcggcggcggaggAGGAGGCGGCGCTCGCGTGCGAGCTGTGCGGCGCGCAGTGCGACAGCGAGCAGGCGCTGCAGGCGCACCGCGCGCGCCACCACGCCGACGACGACTCGGCCGAGTCGGAGGACGACGGCGCCGCGCCTCTGCCGCAGCCCGGCGAGTTCACGTGCGGCCAGTGCGGCGACGGCGTGGCCACGCCGCGCGACCTCATCGCGCACCGCACCATGCACGCCACGCCCACCAAGTTCTTCTGCAACATCTGCAAGGTGTACTTCGCCCGCGCGCTCGACCTGTCGTcgcacacgcgcgcgcgccACTCCGACAACGAGAAGGTGTTCTTCCCGTGCGCCATGTGCGACCGGTTCTACATGAACAAGAAGAGTCTGCAGCGGCACATCGAGATGGCCCATTGA
- Protein Sequence
- MSVNYDSVCRLCLSSRGELLPVFPTTSSDDSEPPVLASKIKDCVSVQISENDDLPTNVCRKCVDNVNNWHIFKSVCERTQNKLELLIKKDGSQLEEIQIKSEPLFDEAYDDGVAIDGEYPDADNENIAGSSKVQPEGPPILASLGLTPRSDKKNVDPRMDWQRVHAILNMVQDDDVIDSLQSIEECDVVQQSDHNSESEAELEVDIDDSYVDCKNGFMSRNRKVISRHPKLSTSQNNAKIKEASRLKKRKLETTKHCPLPKQAWQLLFSDDLLELIVASTNDNILKTGNTISVSTNGAESEKDEEDDDDEDLNEPVQSFTKMPHMPEVSITVMRPSGETLQSRQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKVMNNKKPLPQHMQPKLRPNPFNPKARLMPNPISHKMQLMAKPMPQKIIPHKVNPPKPILVKSGKGPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVETILSEPDGYDQQAGDDEMDGDMTNNQNQHYDTVDMDSENEIEIAREQENDEEDHDQAAEADDNNQNDEENNHYEGQSDTEKDNGEENAGNEEHIGVDESDINKAEQEMGDNEEGNEERENEEQDMNHDDHMDDDDDDLPPMEIAPVVEINEDLQTNSYSEMNEEEEEEELDETADMNDTAAEEEAPKELDPDKLYVTKTQRDFISKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLHCVHCRARFKDKSLIKKHIRNGECTVDISCDLCSEKFVNMQDFNNHALAVHAGSFDQSDNQNKCVDGRPTDCPICGKKNSSYPNLVKHLKIYHDEEKPHYCQHCDAKYEQASDLNKHIYMEHSDRTLGMQPTEPDMSLVKEEQEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQAHPGVGPFPGTLESEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFSPKIIGKPIKQFVDDMQVVAFKRNYNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNDIRNDSEENTMHASTEEDEYNADENGAVLSTPQFNSFNFTNFTNNIQPQVQQAEAMSFACDICFKRFPLRTSVWKHKRAKHGIVGNDNRGQPNEAGSRSSCTICKITFSDKKSYYRHRKNVHKSSSQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSSKIQEIKPDLDVDYENDQDSVDPSVEYQARYPCDTCGKQFVGLLALQNHQCINQLQSQQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPVATAVTAKRRLPPEVEVTVVNPNKKLRSDDSVEIEQHNSMSGSVEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYESGSGGSGGAAAEEEAALACELCGAQCDSEQALQAHRARHHADDDSAESEDDGAAPLPQPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00408646;
- 90% Identity
- -
- 80% Identity
- -