Cper004688.2
Basic Information
- Insect
- Cydalima perspectalis
- Gene Symbol
- -
- Assembly
- GCA_951394215.1
- Location
- OX596203.1:5678992-5688720[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0085 0.66 11.1 0.9 3 23 356 377 355 377 0.94 2 23 0.29 23 6.2 0.3 1 22 770 791 770 791 0.95 3 23 5.8 4.5e+02 2.1 0.3 1 22 832 853 832 855 0.82 4 23 0.029 2.2 9.4 2.3 2 21 865 884 864 885 0.94 5 23 0.41 32 5.8 0.1 2 23 893 915 892 915 0.89 6 23 0.0052 0.4 11.7 0.1 3 23 936 957 934 957 0.96 7 23 0.0017 0.13 13.3 1.3 1 23 963 986 963 986 0.95 8 23 0.11 8.5 7.6 0.0 1 23 1012 1035 1012 1035 0.90 9 23 0.016 1.3 10.2 3.4 1 23 1040 1062 1040 1062 0.97 10 23 0.015 1.2 10.3 0.2 1 23 1068 1091 1068 1091 0.95 11 23 0.0009 0.07 14.1 1.3 1 23 1104 1126 1104 1126 0.98 12 23 0.0013 0.098 13.7 4.0 1 23 1174 1197 1174 1197 0.96 13 23 0.029 2.2 9.4 0.8 1 23 1260 1283 1260 1283 0.95 14 23 0.00095 0.074 14.1 2.1 2 23 1304 1326 1303 1326 0.95 15 23 0.08 6.2 8.0 0.2 2 23 1332 1354 1331 1354 0.93 16 23 0.0085 0.67 11.1 0.2 1 21 1398 1418 1398 1419 0.95 17 23 0.0011 0.083 13.9 0.6 1 23 1429 1451 1429 1451 0.93 18 23 9.7e-05 0.0076 17.2 0.3 2 23 1543 1565 1543 1565 0.93 19 23 2.9e-07 2.2e-05 25.1 1.4 3 23 1572 1592 1571 1592 0.98 20 23 0.006 0.47 11.5 0.5 1 23 1612 1634 1612 1635 0.95 21 23 0.056 4.4 8.5 0.0 1 23 1657 1679 1657 1679 0.98 22 23 0.025 2 9.6 0.7 1 23 1685 1708 1685 1708 0.95 23 23 0.00022 0.017 16.1 0.4 1 23 1716 1739 1716 1739 0.96
Sequence Information
- Coding Sequence
- atgagTGTGAATTATGATCGCGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCCATTTTtcctaccaccagttcggatgACTCGGAACCTCCCGTCCTCGCATCTAAAATCAAGGATTGTGTCTCTATTCAGATAAGCGAGAATGACGACCTGCCAACGAATGTCTGCAGGAAATGTATGGATAATGTCAACAATTGGCATATTTTCAAGTCAGTGTGTGAAAGGACACAAAACAAACTACAGTTGCTGATAAAAAAGGATGGCAGCCAACTAGAAGAGATACAAATAAAGAGTGAGCCTGTGTTTGATGAGGCTTATGATGATGGAGTGGTTATTGATAGCTCATACCCAGATCCTGACAATGAGAGTGGTGCCGGCCCCAGTAAGATGCAGCCAGAAGGCCCACCAATATTGGCGTCATTGGGCCTCACGCCGCGGAGTGATAAGAAAAATGTAGACCCTCGAATGGACTGGCAACGAGTCCATGCAATATTGAACATGGTTCAAGACGATGATGTCATTGATTCACTGCAGTCCATTGAGGAGTGTGATGTTGTCCAGCAGTCTGATCACAACTCTGACTCGGAGGCTGAACTACAAATAGATATAGATGACAGCTATGTTGACTGTAAGAATGGGTACATTTGTAGAAACAGGAAAGTGTTATCAAAGAATCCGAAGCTGTCAACGTCACAAAATAATGCTAAGATCAAAGAAGCGTCAAGACTAAGAAAAAGGAAACTGGAAATACCCAAACACTGCCCCTTGCCTAAACAGGCGTGGCAGTTACTTCTCTCGGATGATTTGCTCGAATTGATTGTTGCATCTACAAATGATAACATACTCAAAAGCGGGAATACTATTTCAGTGTCAACTAACGGTGCAGAAAGtgagaaagaagaagaagaagaagatgatgaagacgACGACATGCATGAGCCAGTTCAAACGTTTACGAAAATGCCGCACATGCCAGAAGTCTCCATCACAGTAATGCGACCCTCCGGCGAAACGTTGCAATCCCGCCAAGGTATTCAACAACTTGCTTCCAAAGATTGCCTGGTATGTGGCCGTTCGTACAGATACTCCCACAATGCCAGACGCCATGAGCTCTCAGCCCACAGTTTTGATAGATATACAAATAAGGTTACTAATAACAAAAAGCCACTCGCGCACATGCAACCAAAATTAAGACCAAACCCATTCAATCCTAAAGCGCGACTTATGCCAAATCCGATTAGCCATAAAATGCAACTCATATCAAAACCTATGCCTCAAAAAATAATGCCGCACAAAGTGATCACTCCACCGAAACCCATACTAATTAAATCAGCCAAAGGACCGCAAAATAACCTACCGTACCCACTTCGCATCAAGGCGTTGAAAGACttgcaaataaagaaaaaagaaccgCAAATTTTGAAAACGCTCTTGACATCCGCACCTGAGGTTCTAGTCTCCGAACCGGAAATTATGAATTCGGGCCCCGAAAGTCCAGAAACTTTGATTTCGGAACCGGAAATCGCGTCTTTCCAAGTTGAAACTATTTTATCGGAACCAGACGGGTACGACCAGCAGCCCGGAGATGACGAAATGGACGGTGATATGTCTAacaatcagaatcaacattacGATACGGTCGATATGGATTCTGAGAATGAAATCGAAATCGCTCGTGAGCAAGATAATGAAGCTGAAGAGGATGACCCAGATAATGATCAAGAGCATGATCAAACTGCTGATGGAGATGATAGCAATCAAAACCAAGAACAGAGTCATCCATACGACGGTCAAAGTGATAATGAAAAGGATAACGGTGAAGAAATTGCTGAACATGAGGAGCATATTGGAGTAGATGAGAGTGATATTAAAGGCGATGAGGAGATGCGGGAAGGAGAAGACGGAAACGACGATAGAGATGATGATCAGGATATGAATCATGATGAAAACGTAGATgacgacgatgatgatgatcttcCGCCCATGGAGATCGCTCCAGTGGTAGAGATAAATGAAGACATGCAAACTAATTCATACAACAGTGAAATTAACGAAGAGGAGGAAGAAGATCTTGAGGAAACTGCTGAGATAAATGATACCACAGTGGAGGAGGAGCCTGTCAAAGAACTTGACCCAGACAAACTTTATGTTACGAAGACACAAAGAGACTTCATCCAAAAATATCGTGATATCATACAACAAATCAATACAAAGCGCTGCCTTTGTTGCGACAGAGAACATCCTCGCAGGAAAGCTGTCATTCAACATTTGCAAAAGAATGGACATAAAGTGCCTAAACATACGTGCTACAATTGTGTGGTAACTTTTGGACATATCGGCGCACTACTGAGCCATATGAGATCAAACAGCTGCACAGATTTATGGAAAATTATCTACAATGAGAATGGTATTACCGATGATTTGGTATTAGAAGAACCGAAAGATAACAAAGTTCAATATAAAGATATCTTTAATGCCAGGTCATATGCATGCAAGTTATGCCCAGCGAAATTCCAATTGAAACAATTTATAATGAAGCATGTTCTAGATGTCCACGAGGACGGGCAGTCCAGAGTGCCTTTGCATTGTGTGCATTGCAGAGCTCGATTCAAAGACAAGAGTTTAATCAAGAAACACATTCGTAATGGCGAATGCACCGTCAATATTTCTTGTGATCTGTGTTCAGAGAAGTTTGTGAATATGCAGGACTTTAATGATCACGCCTTGGCTGTTCATGCCGGAAGCTTCGACCAGTCTGAAAATCAAAACAAGTGTGTCGACGGCCGTCCTACGGATTGCCCTATATGTGGAAAGAAGAATAGTAGCTATCCGAATTTGGTGAAACATTTGAAGATAATTCACAATGAGGAGAAACCTCATTACTGCCAGCACTGCGACGCCAAATACGAGCAAGCTGCTGATCTTAACAAACACATTTACATAGAGCATTCTGATAGAACGTTAGGTATGCAGAGTAATGAGCCGGACATGTCTTTGGTTAAAGAGGAACAAGAAGAGTATCATTATTCGTGCACAGAGTGTAATGCCATATTCGAAACTGTTGACGCTTGGACGGATCATCAGGTTGCCGAACATAATCAGGTCGCTCATCATTGTGACCAGTGCGAGAAGAAATTCTTGCGACCATCAGAACTGGCCGAGCATAAGAACACCCACTTGCGCGTGAAGTTTTATCCTTGTAGCGTTTGTTCCAATTCTTATAGCACCccacaaaaattgtctgaacACGTACAACAGGCGCACCCAGGCGCCGGCTCGTTCCCTACTATGGAGTCTGAGTTCTACTGCGACATTTGCATAAGGTCATTCAAGAGTCGACAAGCGTACTCCAACCACATGCGTATACATGCTAAAGTGCCCACTGTAAACAAAAAACAGGGAGATCCCAAAGGATTTTCGCCCAAAATCATTGGAAAGCCAATTAAGCAATACGTTGATGAGATGCAAGTTGTCTCATTCAAACGAAGTTACAACGTTCCTAATGCTCCTTATTGTTGTGATATTTGTGGCAAAGGCTTTAtgcataagaaaaatatttggaaaCATAAGAAAGTGCTGCATGCTGACCTTATTACCGAGGTTAGGAATGACAGCGAAGAGAATACGATGCACGCATCCACTGAAGAGGATGAGTACAACGCTGATGAAAATGGTGCTGTCCTCTCTACACCGCAATTCAACAGCTTCAACTTTACTAATTTCGCTAATAATGTGCAACCACAAGTGCAACAGCCTGACCCGACGCCTTTCGCGTGCGACATCTGTTTCAAACGGTTCCCACTTCGAACCAGTGTGTGGAAGCACAAACGGGCCAAACACGGGATCGTCGGCTCGGGCTCCGACGGCCAGGGGCAGCCGAATGAAGCGGGAAGCAGGTCGAGCTGtactatttgtaaaattaccTTCTCTGACAAGAAATCTTATTATCGCCATAGAAAGAATGTCCACAAATCATCTTCACAGATGTGCAAAATTTGTGGTAAGCCCCTCAATTCGACATTAGAGTTATATGAACATCTGAAAGCCACTCACGCTCGCGAGTTACTGGGCTACAATGCGAACCAAGGAACTAGCAAGATGCCGGAATTGAAGCCCGAATTGGACGTTGATTACGAAAATGATCAAGATTCTGTCGACCCCAGTGTTGAATATCAGGCTAGGTACCCGTGCGACACGTGTGGCAAACAATTTGTTGGGTTGTTGGCGTTACAAAACCACCAATGTATCAACCAATTGCCGTCACAACCCCAAACATTTGATTGTGAGATTTGCCATAAGAGCTACACGTCGATAGCCGCTCTCAAAAGTCACCGTGGTTGGCATTTACGATCTCCCGACGGTAAAGCGGCTGCCAACAACACTGGGCTGTGGATGCCTCAGCATAAAGTAACTAGTAAGGTTAGTAAACATGAAGTAGTCGACCCGTCGCAACTAGCGCGCGTGACCCATTCAACGCCCGTCTCCACCGCCGTGGCTAAGAGAAGATTGCCACCGGAGGTAGAGGTCACTGTTGtcaatccaaataaaaaattgcgttCAGACGACTCTGTCGAGATGGAACAACACAACAGCATGTCTGGCAGCGTCGAGGATAGATACTGCACGATATGCGACAAAGAGTTCACGAAGCGAGCGGCTTACCAGCGCCACATGGATGAGGTGCACCAGCCAAATTCTGTCTTCTGTCCCGTGTGCGACAAGAGTttcacaagaaaatcaacttTGCTTGTCCACATGAAGAAACATTACGAAAGTGGAGAAGGTAGTTCGACGGGAACGGGTCAGGTGGATGAGGATCCTTCGTATGCTTGCGACCTGTGTGGTGCGCAGTATGACAATGAAAAGGCTCTTAAGGCTCATCGGACGAGGCATCACGGGGAGGAGGAGTCGGGTGAATCGGAAGACGAGGGCAGCGTGCCAGTGAACCAGCCGAGCGAGTTCACGTGCGCCCAGTGCGGCGACGGCGTGGCGACGCCCCGCGACCTGATAGCCCACCGCAACATGCACGCGACACCCACCATATTTTTCTGCAAAATTTGCAAAGTCTACTTCGCACGTGCTCTCGACTTGTCGTCGCACACCCGGGCGAGGCACGCGGACaacgaaaaagtatttttcccATGTGCCATGTGCGATCGCTTCTACATGAACAAGAAGAGTTTACAACGACACATTGAGATGGCTCATTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVSIQISENDDLPTNVCRKCMDNVNNWHIFKSVCERTQNKLQLLIKKDGSQLEEIQIKSEPVFDEAYDDGVVIDSSYPDPDNESGAGPSKMQPEGPPILASLGLTPRSDKKNVDPRMDWQRVHAILNMVQDDDVIDSLQSIEECDVVQQSDHNSDSEAELQIDIDDSYVDCKNGYICRNRKVLSKNPKLSTSQNNAKIKEASRLRKRKLEIPKHCPLPKQAWQLLLSDDLLELIVASTNDNILKSGNTISVSTNGAESEKEEEEEDDEDDDMHEPVQTFTKMPHMPEVSITVMRPSGETLQSRQGIQQLASKDCLVCGRSYRYSHNARRHELSAHSFDRYTNKVTNNKKPLAHMQPKLRPNPFNPKARLMPNPISHKMQLISKPMPQKIMPHKVITPPKPILIKSAKGPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSAPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPDGYDQQPGDDEMDGDMSNNQNQHYDTVDMDSENEIEIAREQDNEAEEDDPDNDQEHDQTADGDDSNQNQEQSHPYDGQSDNEKDNGEEIAEHEEHIGVDESDIKGDEEMREGEDGNDDRDDDQDMNHDENVDDDDDDDLPPMEIAPVVEINEDMQTNSYNSEINEEEEEDLEETAEINDTTVEEEPVKELDPDKLYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLHCVHCRARFKDKSLIKKHIRNGECTVNISCDLCSEKFVNMQDFNDHALAVHAGSFDQSENQNKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEEKPHYCQHCDAKYEQAADLNKHIYIEHSDRTLGMQSNEPDMSLVKEEQEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQAHPGAGSFPTMESEFYCDICIRSFKSRQAYSNHMRIHAKVPTVNKKQGDPKGFSPKIIGKPIKQYVDEMQVVSFKRSYNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLITEVRNDSEENTMHASTEEDEYNADENGAVLSTPQFNSFNFTNFANNVQPQVQQPDPTPFACDICFKRFPLRTSVWKHKRAKHGIVGSGSDGQGQPNEAGSRSSCTICKITFSDKKSYYRHRKNVHKSSSQMCKICGKPLNSTLELYEHLKATHARELLGYNANQGTSKMPELKPELDVDYENDQDSVDPSVEYQARYPCDTCGKQFVGLLALQNHQCINQLPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPVSTAVAKRRLPPEVEVTVVNPNKKLRSDDSVEMEQHNSMSGSVEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYESGEGSSTGTGQVDEDPSYACDLCGAQYDNEKALKAHRTRHHGEEESGESEDEGSVPVNQPSEFTCAQCGDGVATPRDLIAHRNMHATPTIFFCKICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071810;
- 90% Identity
- -
- 80% Identity
- -