Nnoc014057.1
Basic Information
- Insect
- Nomophila noctuella
- Gene Symbol
- foxn3
- Assembly
- GCA_958496325.1
- Location
- OY292496.1:10371515-10380799[+]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 5e-30 6.6e-27 94.1 0.1 2 66 161 224 160 229 0.96 2 13 6.8e-29 8.9e-26 90.4 0.2 2 64 232 293 231 295 0.98 3 13 1.1e-29 1.5e-26 93.0 0.1 2 64 303 364 302 369 0.97 4 13 5.2e-26 6.9e-23 81.2 0.1 6 64 376 433 374 437 0.95 5 13 2.4e-27 3.1e-24 85.5 0.1 4 64 443 502 442 507 0.96 6 13 1.3e-29 1.7e-26 92.7 0.1 2 64 512 573 511 577 0.97 7 13 5e-30 6.6e-27 94.1 0.1 2 66 583 646 582 651 0.96 8 13 6.8e-29 8.9e-26 90.4 0.2 2 64 654 715 653 717 0.98 9 13 1.1e-29 1.5e-26 93.0 0.1 2 64 725 786 724 791 0.97 10 13 5.2e-26 6.9e-23 81.2 0.1 6 64 798 855 796 859 0.95 11 13 2.4e-27 3.1e-24 85.5 0.1 4 64 865 924 864 929 0.96 12 13 1.3e-29 1.7e-26 92.7 0.1 2 64 934 995 933 999 0.97 13 13 4e-28 5.3e-25 87.9 0.1 2 61 1005 1063 1004 1064 0.98
Sequence Information
- Coding Sequence
- ATGGCGCCAATGCGTGGAGAGCGTGGTGGGTCACCGGCTCGCGGGGCGCGGCCATCCCTGCCGCTGCCACGGCGGCTGATCCGCCAGATCGCGAGGCACGTCGCCTCCAGCGGCCGGTCGTTGCGGAGGCTCGAGGTCTCGGGAAGAGTTATAGACAACTTCGATGACATAGATGACGCGTCGGACGAGTCGGATCTTGAAGTACCACAGCCCGCAGTCGCCTGCGGTGGGAATGCAGGCAACCTGCCCCCAGCAGACCACGATGACGACCTCACAAGCCTGAGTTGGCTGCAAGACAGAAATCTACTGAGagGAATAAACCTAACAAAAAGTGATATGGAAGACCCTAAAATAATCGCGAGTCAAGTCGTGATAAAGTCAGAGCCGTCGAAGACGCCTCCGCCGGTCGTGCGCATCCCGTCCCCGCCGCGCACGCCGTGCAAGGCGCCGCCCTCCCCGCCCGCCGTCGCCGCGCACACCAAGCCGCCCTACTCCTTCTCCTGCCTCATCTTCATGGCCATCGAGGCGGCGCCAGCTCGAGCCCTCCCAGTGAAGGAGATCTACGCGTGGATAGTCCGCCACTTCCCGTACTTCAAGCACGCGCCGCAGGGCTGGAAGAACAGCGTGCGGCATAACCTGTCGCTGAACAAGTGCTTCCATAAGGTAACTCAACTAGTAGCAGCCACTCACACCAAGCCGCCCTACTCCTTCTCCTGCCTCATCTTCATGGCCATCGAGGCGGCGCCAGCTCGAGCCCTCCCAGTAAAGGAGATCTACGCGTGGATAGTCCGCCACTTCCCCTACTTCAAGCACGCGCCGCAGGACTGGAAGAACAGCGTGCGGCATAACCTGTCGCTGAACAAGTGCTTCCATAAGGTAATTCTACTAGTAGCAGTCACTCACACCAAGCCGCCCTACTCCTTCTCCTGCCTCATCTTCATGGCGATAGAGGCGGCACCAGCCCGAGCCCTCCCAGTCAAGGAAATCTACGCGTGGATAGTGCGGCACTTCCCGTACTTCAAGCACGCGCCGCAGGGCTGGAAGAACAGCGTGCGGCATAACCTGTCGCTGAACAAGTGCTTCCATAAGGTAATTCAACTAGGAGAAGTCATTTATTGCATCTACTTCTTCTCCTGCCTCATCTTCATGGCGATAGAGGCGGCGCCGGCCCGAGCCCTCCCAGTGAAGGAGATCTACGCGTGGATAGTGCGGCACTTCCCCTACTTCAAGCACGCGCCGCAGGGCTGGAAGAACAGCGTGCGGCATAACCTGTCGCTGAACAAGTGCTTCCATAAGGTAATTGAACCAATAGTAGTCATTTATTGCAACTACTCCTTCTCCTGCCTCATCTTCATGGCGATAGAGGCAGCACCAGCTCGAGCCCTCCCCGTCAAGGAGATCTACGCGTGGATAGTGCGACACTTCCCGTACTTCAAGCACGCGCCGCAGGGCTGGAAGAACAGCGTGCGGCATAACCTGTCGCTGAACAAGTGCTTCCATAAGGTAATTCAACTAGCAGGAGTCATTCTCACCAAGCCGCCCTACTCCTTCTCCTGCCTCATCTTCATGGCCATCGAGGCGGCACCCGCCCGTGCCCTCCCAGTGAAGGAGATCTACGCGTGGATAGTGCGGCACTTCCCGTACTTCAAGCACGCGCCGCAGGGCTGGAAGAACAGCGTGCGGCATAACCTGTCGCTGAACAAGTGCTTCCATAAGGTAATTCAACTAGTAGCAGTCACTCACACCAAGCCGCCCTACTCCTTCTCCTGCCTCATCTTCATGGCCATCGAGGCGGCGCCAGCTCGAGCCCTCCCAGTGAAGGAGATCTACGCGTGGATAGTCCGCCACTTCCCGTACTTCAAGCACGCGCCGCAGGGCTGGAAGAACAGCGTGCGGCATAACCTGTCGCTGAACAAGTGCTTCCATAAGGTAACTCAACTAGTAGCAGCCACTCACACCAAGCCGCCCTACTCCTTCTCCTGCCTCATCTTCATGGCCATCGAGGCGGCGCCAGCTCGAGCCCTCCCAGTAAAGGAGATCTACGCGTGGATAGTCCGCCACTTCCCCTACTTCAAGCACGCGCCGCAGGACTGGAAGAACAGCGTGCGGCATAACCTGTCGCTGAACAAGTGCTTCCATAAGGTAATTCTACTAGTAGCAGTCACTCACACCAAGCCGCCCTACTCCTTCTCCTGCCTCATCTTCATGGCGATAGAGGCGGCACCAGCCCGAGCCCTCCCAGTCAAGGAAATCTACGCGTGGATAGTGCGGCACTTCCCGTACTTCAAGCACGCGCCGCAGGGCTGGAAGAACAGCGTGCGGCATAACCTGTCGCTGAACAAGTGCTTCCATAAGGTAATTCAACTAGGAGAAGTCATTTATTGCATCTACTTCTTCTCCTGCCTCATCTTCATGGCGATAGAGGCGGCGCCGGCCCGAGCCCTCCCAGTGAAGGAGATCTACGCGTGGATAGTGCGGCACTTCCCCTACTTCAAGCACGCGCCGCAGGGCTGGAAGAACAGCGTGCGGCATAACCTGTCGCTGAACAAGTGCTTCCATAAGGTAATTGAACCAATAGTAGTCATTTATTGCAACTACTCCTTCTCCTGCCTCATCTTCATGGCGATAGAGGCAGCACCAGCTCGAGCCCTCCCCGTCAAGGAGATCTACGCGTGGATAGTGCGACACTTCCCGTACTTCAAGCACGCGCCGCAGGGCTGGAAGAACAGCGTGCGGCATAACCTGTCGCTGAACAAGTGCTTCCATAAGGTAATTCAACTAGCAGGAGTCATTCTCACCAAGCCGCCCTACTCCTTCTCCTGCCTCATCTTCATGGCCATCGAGGCGGCACCCGCCCGTGCCCTCCCAGTGAAGGAGATCTACGCGTGGATAGTGCGGCACTTCCCGTACTTCAAGCACGCGCCGCAGGGCTGGAAGAACAGCGTGCGGCATAACCTGTCGCTGAACAAGTGCTTCCATAAGGTAATTCAACTAGTAGCAGTCACTCACACCAAGCCGCCCTACTCCTTCTCCTGCCTCATCTTCATGGCGATAGAGGCGGCGCCCGCTCGAGCCCTCCCAGTCAAGGAGATCTACGCGTGGATAGTGCGGCACTTCCCGTACTTCAAGCACGCGCCGCAGGGCTGGAAGAACAGCGTGCGGCATAACCTGTCGCTGAACAAGTGCTTCCATTAG
- Protein Sequence
- MAPMRGERGGSPARGARPSLPLPRRLIRQIARHVASSGRSLRRLEVSGRVIDNFDDIDDASDESDLEVPQPAVACGGNAGNLPPADHDDDLTSLSWLQDRNLLRGINLTKSDMEDPKIIASQVVIKSEPSKTPPPVVRIPSPPRTPCKAPPSPPAVAAHTKPPYSFSCLIFMAIEAAPARALPVKEIYAWIVRHFPYFKHAPQGWKNSVRHNLSLNKCFHKVTQLVAATHTKPPYSFSCLIFMAIEAAPARALPVKEIYAWIVRHFPYFKHAPQDWKNSVRHNLSLNKCFHKVILLVAVTHTKPPYSFSCLIFMAIEAAPARALPVKEIYAWIVRHFPYFKHAPQGWKNSVRHNLSLNKCFHKVIQLGEVIYCIYFFSCLIFMAIEAAPARALPVKEIYAWIVRHFPYFKHAPQGWKNSVRHNLSLNKCFHKVIEPIVVIYCNYSFSCLIFMAIEAAPARALPVKEIYAWIVRHFPYFKHAPQGWKNSVRHNLSLNKCFHKVIQLAGVILTKPPYSFSCLIFMAIEAAPARALPVKEIYAWIVRHFPYFKHAPQGWKNSVRHNLSLNKCFHKVIQLVAVTHTKPPYSFSCLIFMAIEAAPARALPVKEIYAWIVRHFPYFKHAPQGWKNSVRHNLSLNKCFHKVTQLVAATHTKPPYSFSCLIFMAIEAAPARALPVKEIYAWIVRHFPYFKHAPQDWKNSVRHNLSLNKCFHKVILLVAVTHTKPPYSFSCLIFMAIEAAPARALPVKEIYAWIVRHFPYFKHAPQGWKNSVRHNLSLNKCFHKVIQLGEVIYCIYFFSCLIFMAIEAAPARALPVKEIYAWIVRHFPYFKHAPQGWKNSVRHNLSLNKCFHKVIEPIVVIYCNYSFSCLIFMAIEAAPARALPVKEIYAWIVRHFPYFKHAPQGWKNSVRHNLSLNKCFHKVIQLAGVILTKPPYSFSCLIFMAIEAAPARALPVKEIYAWIVRHFPYFKHAPQGWKNSVRHNLSLNKCFHKVIQLVAVTHTKPPYSFSCLIFMAIEAAPARALPVKEIYAWIVRHFPYFKHAPQGWKNSVRHNLSLNKCFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -