Nnoc017249.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nomophila noctuella
Gene Symbol
ARID2
Assembly
GCA_958496325.1
Location
OY292500.1:9506653-9540532[-]

Transcription Factor Domain

TF Family
RFX
Domain
RFX domain
PFAM
PF02257
TF Group
Basic Domians group
Description
RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 7.6e-08 0.00042 21.5 0.0 2 52 587 641 586 644 0.89
2 9 4e-05 0.22 12.7 0.0 23 52 645 675 641 678 0.92
3 9 4e-05 0.22 12.7 0.0 23 52 679 709 675 712 0.92
4 9 4.3e-05 0.24 12.6 0.0 24 52 714 743 710 747 0.92
5 9 4e-05 0.22 12.7 0.0 23 52 747 777 743 780 0.92
6 9 4e-05 0.22 12.7 0.0 23 52 781 811 777 814 0.92
7 9 4e-05 0.22 12.7 0.0 23 52 815 845 811 848 0.92
8 9 3.9e-05 0.22 12.8 0.0 23 52 849 879 845 883 0.92
9 9 1.9e-08 0.00011 23.4 0.1 23 78 883 941 879 942 0.88

Sequence Information

Coding Sequence
atggcaaaatttcaaataaatcCGAAATCCAGCGCGTATATGAAAGATAAAGAATCTTTTATGACAGACCTGAAACAGTTTAACGAGTCTAAAAACATACAATTTAAGCCACCAATTGTGAATGGGATTGAGATAGATCTATTTCATTTGTATTCACTGGTACAGCAAAGAGGTGGACTTGGCAAGGTTAATCAAAATGACACATGGGAATCATTCTTGCGACCGTTGCGCCTACCACATCCTTGTATCAATGGTTCTACTTTGCTAAGGAGAATCTATGGGACTCACTTAGAAAGgtATGAAAGGGCCAAAGGTCCTCCTGGAagagatgataatgatgacctGGACGAGGATCCAAGAACGAGGGGGCGAGGTGGTGGAATGCCAAGGATATCCTTCGGAGGTGGAAGTGTCTACATTTCCGCAAGCGAGTCAGCCCGCTCGGGACCCCGCGTCGCCGGCCCCTCGGAGCGACTCGCCCTGTCCCTGCTGTCTCCGATGCCCAACGAGCAAGACTTTGCTGTCAACGTATGCACAGTCCTCGCTGCGGATCATTCGAACCGGTTGCCTCTGGCTTCCACTCCGCATATACTGGACTTCTTGCTAGCTCATGCTGGGGTTTATAATCATTCAAGCCTCCGAGACACAATCGGCCGCTCCTACTACGAAGCCCGCGGCCGGTACCCAGACGAGTTCTGGCAGATGCGCGCGGGCGGCGGAGGGGCGAGGGAGCTCGCCGACGAGACCAAGTTCATGCAGCCGGGGTTGGAACAGCCCGAGCTGATGGTGACCGCCCTGGCGGCTCATAATACACTGACGGACTGTCTGATGCAGGAAGATGGGGAGATGGATATACTGGACAAGATTATTGATGATCCATCATACCACGACGTGCTCGAAGACTGGGTGACGGAGCCGTCGGAGGAGAGCCAGCTGTTCGCCCCCTCCCTGCCGGGCGGCGCGGCCTGCGTCTACACGCAGCGGGTGCTCCAGATAGCGTCCATAGTGCGAAGCCTGTCCTTCCACGAGGAGAATGTGCAGTACCTGGCTAGGAATACTACGTTGATACGATTCCTATTGCTATGCGCAAACTGTTGGGTGGGATCATTGAGGCAATCTGGACTCGATACTCTTGGAAATGTTTCAACAGAACTCGTAATAAAGGATCCGGCAACGTGCCTCATATCTCGGCACGTATTATCCACGATACAATCAGCTCTGGTGTCGCCGGACCGAGCGCGGGTGCTAGCTGCATTGGAGCTACTCAACAAGCTGGCGCAGAATGAAGTCAACGAAGACGCGCTGTTGAAGGCTTTGGAGGCTAAGGTGTACAGCGACGTATGTTCGCTCCTCACTCTGCGGGATATCATGGTGTTAGTATGCACTCTGGAGTGTGTGTACGCGCTGACGTCACTGGGCGACCGCGCCAGTGAGGCCGTCGCgagagtgcccggcctggtgCACACTCTAGTGTCTCTGGTCACTGTTGAGGCCCAGAGCTACGGTCCGCGGGCGTGCATCCTGATGCGCGTGGTGGAGACGGTGAGCGGGCCCAGCGCgctggccgccgtggccgagcGGGACGCCGCCAACGACCGGCAGAACGTCGTGAGTGTGCATCAGGCGCCCACGACGCCGCAGAAGGTGCAGGAGCCGGTGGCCCCGCCCacgcccgcccccgcgcccgcacccgcccccgcgcccgtcAACACGCTGCAGCAGAGCCACATGCAGCAGCGGACCGTGCAGGAAAACGAACACTTCGCGCAAGCGTGGCTCCGTTCAACCTACGAGCCGCTCCCTCCCACGGACAACAGCGCGTGTGACGCGGCCGAGCTGTACCGGCAGTACCTGGCCTGCTGCAGCAAGATGGGCCGCAAGGGAGTCATCGCGCCTGCGCACTTCCCCAGGCTGGTCCGCGCGTGTGACGCGGCCGAGCTGTACCGGCAGTACCTGGCCTGCTGCAGCAAGATGGGCCGCAAGGGAGTCATCGCGCCTGCGCACTTCCCCAGGCTGGTCCGCGCGTGTGACGCGGCCGAGCTGTACCGGCAGTACCTGGCCTGCTGCAGCAAGATGGGCCGCAAGGGAGTCATCGCGCCTGCGCACTTCCCCAGGCTGGTCCGCGCGTGTGACGCGGCCGAGCTGTACCGGCAGTACCTGGCCTGCTGCAGCAAGATGGGCCGCAAGGGAGTCATCGCGCCTGCGCACTTCCCCAGGCTGGTCCGCGCGTGTGACGCGGCCGAGCTGTACCGGCAGTACCTGGCCTGCTGCAGCAAGATGGGCCGCAAGGGAGTCATCGCGCCTGCGCACTTCCCCAGGCTGGTCCGCGCGTGTGACGCGGCCGAGCTGTACCGGCAGTACCTGGCCTGCTGCAGCAAGATGGGCCGCAAGGGAGTCATCGCGCCTGCGCACTTCCCCAGGCTGGTCCGCGCGTGTGACGCGGCCGAGCTGTACCGGCAGTACCTGGCCTGCTGCAGCAAGATGGGCCGCAAGGGAGTCATCGCGCCTGCGCACTTCCCCAGGCTGGTCCGCGCGTGTGACGCGGCCGAGCTGTACCGGCAGTACCTGGCCTGCTGCAGCAAGATGGGCCGCAAGGGAGTCATCGCGCCTGCGCACTTCCCCAGGCTGGTCCGCGCGTGTGACGCGGCCGAGCTGTACCGGCAGTACCTGGCCTGCTGCAGCAAGATGGGCCGCAAGGGAGTCATCGCGCCTGCGCACTTCCCCAGGCTGGTCCGAACGGTGTTCGGCGGTACAGTCGGTCCCAACAACGTGACCACAACGACGGGAGAAAGTCAGCAAGTGTACATCGGTATACGAGCGAGAAACGCACAGACTAGAACGAATCCTCCTGCAGGTCCATCTTCTCCGATCCTGAAAGCGCAGTTAACCAATAAGCCCGGGAGTGCAGTAGAAGTCAAGCAGATAACTACTCAACAACCACAGGCCACGCCCACTCCCGCGGCACACCCGCAGCTGGCAGCGGGCCTGGAGGCGGGCGCGTGCAACACGACGCTGATCAAGCACCTGCTCGCGCACAAAGTAAGCCCCGCGCCTGCGTCTGTGCCCGCGCCGCAAGTTGCTCAGCGACAGCAAAGCCAACAGAGAGTGGGTCCACCAACCAACACAGTCGTCGTACAGAATAATCAGGTTATGGATGTGGACCCAGAGGCGTTGATCAAGTGCACGACTATAACACCAGGTGGCGTTGCGAGTAGCACTCCTGTTGCTGAAAAGGTGCAATATGTCAATGCTGCCGATGACCAAATAGTCATAAAAGAAGAAGCCGTGCAAATCCAAATCGACGAAGCAGCACAGTTGACTATTAAAACGGCACAGAACAAAATGCTAGCCGATCTTCTAGAAAAGAAATCAAACCCGCCAGTCCAAGTGGTCCAAATGGGCCAGCAAATAAACGCTCCAACCATACAGATTACCGAAACGGGTCAGATAGTCCAAGTAAAGCAGGAGACTGACCCAGTAATCCAGATAAACGACCCGATGGCGCAGAACCAATTTTTCCAGATAAAGAATGAGCAGGGGCAGTTGATACAGATAAAGAACGACCAAGGGCAGTTGATTCAAATCAAGAACGACCAAGGGCAGTTGATTCAAATCAAGAACGACCAAGGGCAGTTGATTCAAATCAAGAATGACCAAGGGCAGATAATACATTTGAAGAGCGATCAGTTGCAAGCTCCGATGCTTCAGTTCAAGAACGATCAAGGGCAGATAGTGCAAATGAAGAATGAACAGATCAATTTGCAGAGCGGTCAGATTATACAGCAGGCGGTGATGCAGGCTATGAAGAGTGAAAAGGACCAGATGGTGGATACGGTTGTGACCGATCACTCGTATACCGAGCCGCCAGCGAAAAAGGCTAAGGTTGAGGAGAAGAGAGAGAGCAACTCGCCTCAAGAAAGCGTGTCCAAGACTGCAGCAAACTTATATGCGGCTCTTGCAGCGTCTGCTCTTGAAGATGAAGATTTGATGCCTCCAAAAACTGAACCAGATTCAATCCCACAATCTGTTTTAGTAGCTGGCACTGGAGATAATGGATCTGTTATCATACAGGAACCAATTTTACAGGTGCAGCAACCTGCAATGCAAGTGCAGCAGCCGACTTTGCAAGTGCAACAGCCAACGCTACAGGTTCAGCAGCCAACGATGCAGGTGCAAACGCCTACTATGCAGGTGCAGCAACCGACAATGCAGGTCCAGCAACCGATGTTGCAAGTACAACCGATGGATGTGCAGAACATTATCGCCTCCCAGTCTGGACAGATTATCCTTCAAGAAAAAACGATCTCCTCTCAACAACCTCAATTTGTGCAGCAGCCGATGCAAATAATTGCAACACCTAGCTCTTCACAAGGTGGATTGAGTTATCTTACTCAAAATTTACCCGGAAATATGATGCAGAAGACTATAATAATAGTCCAAGGGCCAACTGGAGGCGGCCCTCTGACACTGACGGTCAACAACCCCGGCGGCCTGGACGAAGCGACGCTAAACAGCCTTATTACACAGGCCACAGAGGCTATAACGCAACAGCAAATAATACAGAATTCGGGCGTGATTCAATCGACTCAGAGGGTGATTGTGAGTCAGCCAACGCTAGTGAGCACGGCACAGCCGATCACTGTGGTCAAAACGGCCATAGCACAGAATGCCCCTCAAATTACCCAAAGTCAGCAGCCCATTATTACAACACAACCACAACCCCACAAGGCACAGATCGTCAACCAACAACAGGGCCAGCAAATCGTTGTCACCCAGAAGCAACCTCCTGCGTTGATCAGCACATCGTCAAACAACCAAATCGTGACCGGCAACCAACAGATTATACAAGGAGGCCAACAGATAATACAAAGCAACCAGCCATTAATGCAAGGCAACCAACAAATAATACAAGGCAACCAACAGATAATACAGGGCAACCAGCAGATAATTCAAAGCAACCAGCAAATAATACAAGGAACTCCACAGATGGTTACCGGTAACCAACAAATTATTCAAGGGAACCAGCAGCTGCTGCAAGGCAACCAGCAGATAATAGCTGTGTCGAATAACCAGCAGATAATAGTTAATACACCTATGAAGCCTGGTGTTCATAGAGTGGTGACGACACCTCAGAGAAGTCAGGTGGTAACGACTGTTCAACCAACAGTTGTTAATCAAAGCCCGGCGGTTCAAAGTGAATGCAAGACTAGTGTTATACAGAGTAATGCCtCAAAAACACCGCAGCCCGTGATGAGACAAGTGATAACACGACAGCCGGTCATGGTTGGCAACACCAAAATAGGCGAGAAGGAAATGGTTGTCAATCAACCGGTTACCGTTAATGAGGTAGCAAAACCGCCGACGCCGAAGCCGTCAGCGACGCCGCCCCCGCCGGCgacgccgcagccgcagcccgtGCCGGCGGGCGCGCAGGACGACACGCCTTGGATATGCCATTGGAGGGGATGTGGGAAATCGTTCCTGAACGCAGCGGACGTGTTCACTCACTGCGCGCGGGTCCACTGCCCGCCCAGTGCGGCGGGCGAGGCGCCGTGTCTGTGGCTCGACTGCGACCGCGTGCCCCGCAAGACCTTCGCGCTGCTCAACCACCTCACTGACAAGCACTGCACGCCCAATGCGCTAAAAGCGATATTCAACGCGCGACGTCACCAAGCGGCGGAGGCGGAGGGCAATAAACCAGTGTCTTTAGGTTACCCGCCCAACGCGGCGTTGGCTGCTTTGAACAAACACGCAGCGGACATGTTCAACCCGAGGGAACTTATGGTTAATGGAAGATATTTACTATTACTGAACCAGGATGAGAACGAGGGACCCGTGACTAAGAGCATACGACTCACCGCCGCTCTTATACTGAGGAATATCGTCATATACTCCAACACTGGGAGAAGGCAACTCCGGTCGTACGAGGCACACCTAGCGTCCATCGCCCTTAGCAACGTCGAAGCTTCTCGAACGATTGCGCAGGTCCTGTACGATATGAACAACATTTGA
Protein Sequence
MAKFQINPKSSAYMKDKESFMTDLKQFNESKNIQFKPPIVNGIEIDLFHLYSLVQQRGGLGKVNQNDTWESFLRPLRLPHPCINGSTLLRRIYGTHLERYERAKGPPGRDDNDDLDEDPRTRGRGGGMPRISFGGGSVYISASESARSGPRVAGPSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLASTPHILDFLLAHAGVYNHSSLRDTIGRSYYEARGRYPDEFWQMRAGGGGARELADETKFMQPGLEQPELMVTALAAHNTLTDCLMQEDGEMDILDKIIDDPSYHDVLEDWVTEPSEESQLFAPSLPGGAACVYTQRVLQIASIVRSLSFHEENVQYLARNTTLIRFLLLCANCWVGSLRQSGLDTLGNVSTELVIKDPATCLISRHVLSTIQSALVSPDRARVLAALELLNKLAQNEVNEDALLKALEAKVYSDVCSLLTLRDIMVLVCTLECVYALTSLGDRASEAVARVPGLVHTLVSLVTVEAQSYGPRACILMRVVETVSGPSALAAVAERDAANDRQNVVSVHQAPTTPQKVQEPVAPPTPAPAPAPAPAPVNTLQQSHMQQRTVQENEHFAQAWLRSTYEPLPPTDNSACDAAELYRQYLACCSKMGRKGVIAPAHFPRLVRACDAAELYRQYLACCSKMGRKGVIAPAHFPRLVRACDAAELYRQYLACCSKMGRKGVIAPAHFPRLVRACDAAELYRQYLACCSKMGRKGVIAPAHFPRLVRACDAAELYRQYLACCSKMGRKGVIAPAHFPRLVRACDAAELYRQYLACCSKMGRKGVIAPAHFPRLVRACDAAELYRQYLACCSKMGRKGVIAPAHFPRLVRACDAAELYRQYLACCSKMGRKGVIAPAHFPRLVRACDAAELYRQYLACCSKMGRKGVIAPAHFPRLVRTVFGGTVGPNNVTTTTGESQQVYIGIRARNAQTRTNPPAGPSSPILKAQLTNKPGSAVEVKQITTQQPQATPTPAAHPQLAAGLEAGACNTTLIKHLLAHKVSPAPASVPAPQVAQRQQSQQRVGPPTNTVVVQNNQVMDVDPEALIKCTTITPGGVASSTPVAEKVQYVNAADDQIVIKEEAVQIQIDEAAQLTIKTAQNKMLADLLEKKSNPPVQVVQMGQQINAPTIQITETGQIVQVKQETDPVIQINDPMAQNQFFQIKNEQGQLIQIKNDQGQLIQIKNDQGQLIQIKNDQGQLIQIKNDQGQIIHLKSDQLQAPMLQFKNDQGQIVQMKNEQINLQSGQIIQQAVMQAMKSEKDQMVDTVVTDHSYTEPPAKKAKVEEKRESNSPQESVSKTAANLYAALAASALEDEDLMPPKTEPDSIPQSVLVAGTGDNGSVIIQEPILQVQQPAMQVQQPTLQVQQPTLQVQQPTMQVQTPTMQVQQPTMQVQQPMLQVQPMDVQNIIASQSGQIILQEKTISSQQPQFVQQPMQIIATPSSSQGGLSYLTQNLPGNMMQKTIIIVQGPTGGGPLTLTVNNPGGLDEATLNSLITQATEAITQQQIIQNSGVIQSTQRVIVSQPTLVSTAQPITVVKTAIAQNAPQITQSQQPIITTQPQPHKAQIVNQQQGQQIVVTQKQPPALISTSSNNQIVTGNQQIIQGGQQIIQSNQPLMQGNQQIIQGNQQIIQGNQQIIQSNQQIIQGTPQMVTGNQQIIQGNQQLLQGNQQIIAVSNNQQIIVNTPMKPGVHRVVTTPQRSQVVTTVQPTVVNQSPAVQSECKTSVIQSNASKTPQPVMRQVITRQPVMVGNTKIGEKEMVVNQPVTVNEVAKPPTPKPSATPPPPATPQPQPVPAGAQDDTPWICHWRGCGKSFLNAADVFTHCARVHCPPSAAGEAPCLWLDCDRVPRKTFALLNHLTDKHCTPNALKAIFNARRHQAAEAEGNKPVSLGYPPNAALAALNKHAADMFNPRELMVNGRYLLLLNQDENEGPVTKSIRLTAALILRNIVIYSNTGRRQLRSYEAHLASIALSNVEASRTIAQVLYDMNNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01071417;
90% Identity
iTF_01071417;
80% Identity
iTF_01071417;