Nmel001019.1
Basic Information
- Insect
- Nomia melanderi
- Gene Symbol
- Bgb
- Assembly
- GCA_003710045.1
- Location
- NW:367031-380923[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-79 3.5e-75 250.3 0.3 2 162 40 197 39 201 0.97
Sequence Information
- Coding Sequence
- ATGATGCACACCATGAGTGAACACGCCGGAGGAGCTGCCGGGCTGGGTGTCAGCGTGCTGCCCTTCGACGGCATGGGCCTGTACGAGCAGAGGCGACCCAGGCTGATCTTCAAGGTGCCCCGGGTCGTACTGGATCAGAAGGGGAAGTTTGAGACGGACGAGTTGTTCAGGAGACTTAGCAGAGAGAGCGAGGTCAGATACACCGGATTCCGGGACAGGCCAGTCGAAGAACGTCGCGTGCGCTTCCAAAATGGCTGCCGAGAGGGCCACACGGAGATCGCGTTCGCGGCGACCGGAACGAACCTCCAGCTCGTTTTTGGCAGTGCATCCGGAAATTACGCAGTCGAGATCAGCGACTGTGATTTTGAGAAGGATTGCGGCAAGGTCCACCTGAGATCACAGTTGATAATGAACGGTGTGTGCGTGATATGGCGGGGCTGGCTCGACCTGGAGAGGCTGGACGGTGTCGGTTGCCTGGAGTTCGATGAGAAACGCGCTGCCGAAGAAGACGCGATCCTCCGTGACCAAGTGGAACGTTACAGCCAGCGTCAGCGCGACCTCGACGAGAAACAGAGAGCGTACAGGAGCAGTGCGCCCCACCTAAATTACCATCACCATCACCACCACGGTCATCACGTGAGCGGTGCCGGCACCGGCGCCGGAAGCGGGATCGAGCCACATTTGACGCACCGACAGGACCCCGAGATGGAAGTGCGGCTGAGAGCCTACTGA
- Protein Sequence
- MMHTMSEHAGGAAGLGVSVLPFDGMGLYEQRRPRLIFKVPRVVLDQKGKFETDELFRRLSRESEVRYTGFRDRPVEERRVRFQNGCREGHTEIAFAATGTNLQLVFGSASGNYAVEISDCDFEKDCGKVHLRSQLIMNGVCVIWRGWLDLERLDGVGCLEFDEKRAAEEDAILRDQVERYSQRQRDLDEKQRAYRSSAPHLNYHHHHHHGHHVSGAGTGAGSGIEPHLTHRQDPEMEVRLRAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394046;
- 90% Identity
- iTF_00625271;
- 80% Identity
- -