Basic Information

Insect: Nomada ruficornis
Gene Symbol: salm
Assembly: GCA_951802695.1
Location: OX637855.1:4616916-4627222[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 5.1e-06 0.00052 20.8 0.9 1 23 379 401 379 401 0.98

2 9 1e-05 0.001 19.8 2.1 1 23 407 429 407 429 0.98

3 9 0.063 6.5 7.9 3.8 2 23 791 812 790 812 0.98

4 9 4.3e-08 4.5e-06 27.3 0.6 1 23 818 840 818 840 0.97

5 9 6.1e-05 0.0062 17.4 2.6 1 23 850 872 850 872 0.98

6 9 0.0021 0.22 12.5 1.9 2 23 1180 1201 1179 1201 0.97

7 9 0.031 3.2 8.9 1.0 1 14 1207 1220 1207 1221 0.92

8 9 5.9e-07 6e-05 23.7 2.1 3 23 1408 1428 1406 1428 0.96

9 9 2e-07 2.1e-05 25.2 0.9 1 23 1434 1456 1434 1456 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	5.1e-06	0.00052	20.8	0.9	1	23	379	401	379	401	0.98
2	9	1e-05	0.001	19.8	2.1	1	23	407	429	407	429	0.98
3	9	0.063	6.5	7.9	3.8	2	23	791	812	790	812	0.98
4	9	4.3e-08	4.5e-06	27.3	0.6	1	23	818	840	818	840	0.97
5	9	6.1e-05	0.0062	17.4	2.6	1	23	850	872	850	872	0.98
6	9	0.0021	0.22	12.5	1.9	2	23	1180	1201	1179	1201	0.97
7	9	0.031	3.2	8.9	1.0	1	14	1207	1220	1207	1221	0.92
8	9	5.9e-07	6e-05	23.7	2.1	3	23	1408	1428	1406	1428	0.96
9	9	2e-07	2.1e-05	25.2	0.9	1	23	1434	1456	1434	1456	0.98

Sequence Information

Coding Sequence: ATGCAGCTCATGAGATGGAGTATCACGCGTCGTCTCGAGTGCCGGGGGACCAAGCAGAGCACCTGCAGGCCCTCTAGACCCTCGTGTCCCCGATCTTCCGGAGAGGAAAATGACTTCACATCGGACGGCGAGGAGAGTGGAGGTGGAGGAGTTGGTGGAGACGAGGCCGTGGATCTCACGGCGTCCAGGTCCCACCAGGGCGACGAAGACGAGAAGGACCCGGAAGACGGTCTGgaagaggacgaagaggaAGGTGTGGACGAGCAGGATGAGCAAGAAGACGACGAGGAAGGTTCCCGTAAACAGATGCGTCACAGACAAGATGCGGAGAACAACAATAACTTCGTCGAGACCGGGACGCCCGCTAGTCTGTTCCCGCCAGCTGGAACTAGTCACGTTACTCTGGAAGCCCTTCAGAATACGAAAGTGGCGGTCGCTCAGTTCGCAGCGACAGCCTTGGCCGGTGGAGCGGACAGCGAGGCAGCTCTGCAGGATCTGGCACTGCTACAGAGCACCCTGTACACCCTGCAGCATCAGCAAGTGTTTCAGCTACAGCTGATCAGCCAGCTCCAGCAGCAGCTGTCCATCACGCACAATCAGCCCTCGCAGCAGCAAGGAACGAACGAGCCGTCGGACAGCAAAGAAATATCTCCGTCACCGATCATCCAGCCCAAACCACTGTCGAGTCTGACTTCGCCTCCCTCGTCGCGGCCGCCGAGTCATCAGCAAACCTCGCCAGCTCCCATGACACCCAACCTGACGCAGGAGAGGCCCACCCCGGCCAGTAGCGCGTCCCCTTTGAATCTTCCATTGGCCTCCTCGAATACGACGGGGACAACCGCGACTACTAGCAGCAACAGCCACGTGCCGATACCTCATCAAATGCCGCCACTCTGCTCGATCAGTTCTTCTCTAGCCTCGTCGATAATTACCAACACCGATCCGCCACCTTTGCACGAGCCGAACACTCTGGAGATGCTGCAGAAGAGAGCCCAGGAGGTGCTGGACAATGCCAGCCAAGGACTTCTAGCGAACAACCTGGCCGACGAGCTGGCGTTCAGGAGCGGAAAAGGCTCCCGCCTGTCCCCGTACGACTCGAAATCCGGCGGCGGTCGCGGAGAGCCATTCTTCAAGCATCGATGCCGGTATTGCGGCAAGGTGTTCGGCAGCGACTCGGCGCTTCAGATCCACATACGATCGCACACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGCAGCCGCTTCACCACGAAAGGGAACCTGAAGGTCCACTTCCAGAGGCATACGGCCAAGTTTCCACATGTTAAGATGAACCCGAATCCCGTTCCGGAACACCTGGACAAGTACCATCCACCCCTGCTACAGCAAATCGCCTCTGGTCAGAGACCGATGCCGTCCCCGCCGCCACCGCCGCCTTCTCACCATCCCCCTTTTCATCCGGCGGCGGCGCACGGTTTTCTGCCTCCTCAGCCGCCCCTGCCACTCAGTCTAGCCCTGCCCGGTATGCCACCTCTGTACAGATCGCCGGTTGTCGCTCATCGAGACGATCAGGATGTGCCGGAGAACCTGAGCAAGCCCGTTACCACTGCCCCAACCACGTCCCCACATTCCCCCGCGATTGTGTCCAACTCTCGTCATTCCTTTCACGACAATCACCAACAACAACAAAAGCAGCAGCTCGAGCAGCGAGATGAGATCAAGCACGAGCAGCGTTCACCTATGCAAGAGCAGTACCAGCAGCGGCCAACGAGTCAGGAAATATCCGAGAGGATAACGCCGAAGAAAGAGCCAGAGGAGGCTGAGGAACCCACGGAGGAGGAGAGCGAGGATTTCGAGGAGACGACCAGACGGTACTTGAACTCGCCCCAATCCTCTGTCAACCCACCGTCTCAGCCGCAAATCTACGACGACTGTAGCATGGACAGCAAGATCAGCGGTCGGCTCGAAGGAGACGGCGACATGGAAATCGACGAGGAGATCGAGGAGCAGCCCGAGAACCTGTCCGGCAGAGGAACTATGAATCGTTTGCCCCAGCACATCGTCGCGTACCCTGGCGCTTCGCCCGCAAGTAGTAGCGCGAGCAGCGGAAGTCTCCAAACCTCCTTCGCGGGTATCCTATTCCCGGGACCACCAGCGCACCACCAAATACCGCTCCACACCGCCTCGACGGTCGCGAACACACCCACGGTCTCCATGAACGAGATGATCGACCCCGCCAAGGATCCAGCTATCTATTCCAGCCTGCTACCGCGGCCAGGCAGCAACGACAACTCCTGGGAGAGCTTGATCGAGATTACGAAAACCTCCGAGACGTCCAAGCTGCAGCAGCTGGTCGACAACATCGAGCACAAACTGACCGACCCCAACCAATGCGTGATCTGCCACAGGGTGCTGTCCTGCAAAAGCGCGCTGCAGATGCATTACAGGACGCACACTGGCGAGCGTCCGTTCAAGTGCAAGATCTGCGGCCGGGCGTTCACCACCAAAGGGAACCTGAAGACCCATATGGGTGTGCACAGAGCGAAGCCGCCACTCAGGGTCCTGCACCAGTGTCCCGTCTGTCACAAGAAGTTCACGAACGCCCTGGTCCTCCAGCAGCACATAAGGTTGCACACTGGCGAGCCAACGGAACTCAGCCCCGAGCAGATCCAAGCTGGCGAGGTGAACGAGTTCCCGCCGGGCTACCCGCATCATCCCCTCGCGTCGTTTCTCCCTCAAGGCTTCCCACCAATTCATCCCGCCGGTGCTGGCTTTCCACTGGGCTTCCCCCCAAGTAGGCTGCAGGGGCTGGAGAGACAGCCCCAGGAGAACGAGTTAGGGCTGAAAGACGAGCCTCAACAGCAGCCGCACCATCATCACCACCACCTTCAGCAACaccagcaacaacagcagAGGTACGGCGAGGAGCACAGCGAAGAAGCGGACGATCAGGAGGACGAGGACGAAGATCGCAGGGACGAGGACGAGAGGTGCGACGTGAATCGTGAGAGCCGCGTCGACGTGGAGGACGAGCGGGACCGTGAAAGCGAAGAGAACGAACAGAAAGAGATCGCCATACCCAGCTTCTCCACCTCCCTCGCCGCCCTGGAGAATCAGGTCCGGACGATCACAACGACGGCCACGTCGACCATTGGAAACGTCGCCAGGTCGCCACCTTTCCATCGCTACAACGGTAGCGAGAAGAGCAACAGTCCTCCGAACCCTGGCGCGCCGCTCGACCTGACGCCCAGGGCGTCGTCCACCCCAGCCTCCGTGGCGTCGGTGCCAACGCCGCCCCCACAGATCGCCACGCACCATCCGCATCCATTCGGAATGTTTGCAGGCTTGCTGCAGGCGGTCTCTTCGTCGCCGTCTACCAGCAGCATCGGATCGTCGAGCATAAACAGCGTGAGCTCGATGAACGCTGTCACCAGCGGAAGTGGCGGACCCACCGGACCCCTGGCCTCCCTAACCACGTCGGCCGTGCTGGCTGCCACGTCGACGTACAACCCGCTCGGCCTGGCTGTCGGAGGGCCAGCAGTGCGTGGAAACACCACATGTAATATCTGCTACAAGACATTCGCGTGCAATTCCGCGCTGGAGATCCATTACCGGAGCCACACGAAGGAGCGACCTTTTAAATGCACCATATGCGACAGGGGCTTTTCCACCAAGAACGATGGTTCCGGGCAGCAAGCATGCGTCTGTGCGTCTCAACCGTTGCCCGCAAACAGTTCGATCACTTCACCCGATCCACAATACGGATCAGCGTGCGCCAATAGTCGAGAAAAAGCGAAACGCAGGCGGCGGCGGCGACCTGAGGAACGGAAGAGCCGGGGGCGGAAAGGAGCCGGAGGGGGGCGGGGGCTTACGCCTGTCTATCCTGCCATCCGCCTACCCCCGCTGATGTCACCCGCCCTCGGACTTCTACCCTCGGCGCACAGCCTCCTGGGCAACATGAAACAGCACATGCTGACACACAAGATACGCGACATGCCGGCCCACCTGTTCAGCGACGCGAAGCAGCAACACCAGCAACAGTCACAGGAGCACGAGACCTCGAGAAGTCCGATGTGCGCGGAGGATTCCAGTTTACCGCctccgccgccgccgccgccgccgccacccCCGCCGATGCCGCCGACCTCCGTCGAGCAGAGCATCTCGGTGAAAAGATCGCCGACCGAGGGAGAGCTGCCGGCGCCGAAGAGGCCAACCAGCGTGCCGAGCAAGCACTTGTGCCAGATTTGCAATAAGAATTTCTCGTCATCCTCGGCGCTCCAGATCCATATGAGAACTCATACAGGCGACAAACCGTTCCGATGCACCGTCTGCCAGAAGGCGTTCACCACCAAGGGCAATCTAAAGGTGCACATGGGCACGCATATGTGGACCAACGGGGCCTCGCGACGAGGTCGTCGAATGTCGCTGGACCTACCTCCCCTGCCCATCACCCCCAAGGACTCGGAGTTTCTTCAGCGAAGGCCGGATCTTTTCTATCCGTATCTACCCGCGCCGTTCCTTAACGGCGTGCAGCAGAAGCTGAACGAGATCTCGGTGATACAAAGTAACAACGGTTTACCGAGCCACACCGTGGCTGCCGGGAAGTACGCAGGGTTATTCGGCTCTGTCTACGCGGCTGGGGCTGGCTTCCCCCTGGACAAGCAGCCAATGACGGCGACCAGTAACGGGCCGCTGCTCGACGGGAAATCCTCCATCCCGTCCGGGTCCATGCTCTTCCAAACACCGTCACCGTCCCATTCGCCAGGCACTCCATCGTCGAACGGTAGCAATCAGAACAGCACCGGTGCACCTTCGTGGACCGGCGACGCTCTCCAGCACCATTTCGACAGAGAACCTGCCACCAGGTCAGAGGGTAACTCGACACCGCCCTCTGCGCGACTACCGCCACCCCCAACGGCCAGGGGTGAAGGACTGACCACGTGA
Protein Sequence: MQLMRWSITRRLECRGTKQSTCRPSRPSCPRSSGEENDFTSDGEESGGGGVGGDEAVDLTASRSHQGDEDEKDPEDGLEEDEEEGVDEQDEQEDDEEGSRKQMRHRQDAENNNNFVETGTPASLFPPAGTSHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHNQPSQQQGTNEPSDSKEISPSPIIQPKPLSSLTSPPSSRPPSHQQTSPAPMTPNLTQERPTPASSASPLNLPLASSNTTGTTATTSSNSHVPIPHQMPPLCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRSGKGSRLSPYDSKSGGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRPMPSPPPPPPSHHPPFHPAAAHGFLPPQPPLPLSLALPGMPPLYRSPVVAHRDDQDVPENLSKPVTTAPTTSPHSPAIVSNSRHSFHDNHQQQQKQQLEQRDEIKHEQRSPMQEQYQQRPTSQEISERITPKKEPEEAEEPTEEESEDFEETTRRYLNSPQSSVNPPSQPQIYDDCSMDSKISGRLEGDGDMEIDEEIEEQPENLSGRGTMNRLPQHIVAYPGASPASSSASSGSLQTSFAGILFPGPPAHHQIPLHTASTVANTPTVSMNEMIDPAKDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTELSPEQIQAGEVNEFPPGYPHHPLASFLPQGFPPIHPAGAGFPLGFPPSRLQGLERQPQENELGLKDEPQQQPHHHHHHLQQHQQQQQRYGEEHSEEADDQEDEDEDRRDEDERCDVNRESRVDVEDERDRESEENEQKEIAIPSFSTSLAALENQVRTITTTATSTIGNVARSPPFHRYNGSEKSNSPPNPGAPLDLTPRASSTPASVASVPTPPPQIATHHPHPFGMFAGLLQAVSSSPSTSSIGSSSINSVSSMNAVTSGSGGPTGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKNDGSGQQACVCASQPLPANSSITSPDPQYGSACANSREKAKRRRRRRPEERKSRGRKGAGGGRGLTPVYPAIRLPPLMSPALGLLPSAHSLLGNMKQHMLTHKIRDMPAHLFSDAKQQHQQQSQEHETSRSPMCAEDSSLPPPPPPPPPPPPPMPPTSVEQSISVKRSPTEGELPAPKRPTSVPSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLPSHTVAAGKYAGLFGSVYAAGAGFPLDKQPMTATSNGPLLDGKSSIPSGSMLFQTPSPSHSPGTPSSNGSNQNSTGAPSWTGDALQHHFDREPATRSEGNSTPPSARLPPPPTARGEGLTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00118182;
90% Identity: iTF_00676196;
80% Identity: -