Nruf006048.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nomada ruficornis
Gene Symbol
PAXBP1
Assembly
GCA_951802695.1
Location
OX637849.1:14205839-14219442[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.3e-28 5.3e-24 85.8 2.1 3 272 542 750 540 752 0.90
2 2 1.6 1.3e+04 -4.1 0.0 145 180 1092 1129 1082 1130 0.74

Sequence Information

Coding Sequence
AtgtcattatttaataaaccgAAGAGAAACATCCGTCGTCGGCATttcaacgacgacgacgaggataatgaaaacagaaatgaAGTGGAGGACACACAGCCTGTAAAATTTAAAGCAAAGAAGAAGGATAAGCCAAAGCAAACGCTCCTCAGTTTCGGAGAGGAGCTGGAAGAAGCGGATGATGGGGAGGTCTTTAAAGTGAAGAAATCGTCGAGGAGCAAAAAATTGATGAAACAGCTAGATCACGAacggagaaaaaagaaaggtgAAGAGAAAATGCAAGTGGACTCTGAGCAAGCGAACATGTCCATTAAACAGGAAAAAGATTTAGAAATAAAGACAGATGATCTAGTAgtgaaaataaaaaataccgGACCATTAATCTTAAATGGACGGGCTGCGCTGGCAGCTGGAAAGGATGATTATACGTCtgatgaagaagaagatgaaCCACGTAGTCATAAATTTAGAAGAAATACAGATAAAGCTGATACAATGAAAATTCTGCTTGAAAGTGGTTGTATACCTGATGCAGCAATGATCCACGCAGCTAGAAAATGCAGACAAAAGGCAAGAGAATTAGGAACTGATTATATTCCTATAGAAGAACAAAGTGATGATAAAAGCAAGTCCAGACTTATTAGAGAAGAAGATCATGATAGGAGTGACGATGATGATTCGCAAGATCGAATTGATATGACCGTTAACACTGAGGCACGtgataaagaaaaaaggagagaagCGTTCCTTGCTTCGCAAGTTCCATTAAAACTTTCCGACGATGAGAGCGAACatgaaaatgaagaagaagaatggGAGGCTCAACAAATTAGGAAAGGTGTAACTGGTGCTCAGaTCGCAGCAGCACAACAGGACTCTATGATGCAACAACAATATTCAATGGGTATGAATGTAAATCAAATGATGGGAACTGGAATATCTTTGGAAATGGTAATGATGCCAGCACCACCACCTCCACCGGCGATTCAACCACCAGATCCAACGAAAATAGTACCAATCACTCCCCAAGAAGTTGTGACTAAAATGCGTACAAGATTGGACAGTTTGAAAGAGGTTCATCGACGACATCAATTAGATCAGGACTGTTTAGAACAAGAGTTAGGACAAACAATGAAAGAACTGGATGATGGCGAAATCCGTGCACCGCAGCTTGCACAGCGCTTCAGATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGATGAGAAGCTGCCGCTGATTGTTGGATTGGAGCAACGCTGGCTAGACCTTTATAGTGAACGAGCGACTGAATTAATGGAAAGAAGACGACAAGATACAAGGGATCAAGCCGAAGAGATTACCACAGCTGCAAGGGGTCAACCCATACGGAGGGGGCCGGAAGTTGAAGCTCGCATTCGTCGAGCTACGGAAAGGGAAGGTAGAAGAGCTCGTCGAAGAAGAGCCAGAGAGTTAGCCCCTACACTACCAAAACATATCGATGGAATGTCCAGCGATGACGAAGTTACTGAACAGCAAAATCTTGCGTTTAAACAAACGAAAGATGAGATTGACAATGAAAGTAAAGAAATATTCGCCGATGTCATGGATGAATATTGTACAATAAGAGGAATTCTTTCGAAATTGGAATCTTGGAGAGAAACTGATCGAGATGCTTATATGGAAGCTTATGTGTCTTTATGTATACCGAAAATTATTTCCCCTATCATTAGATTACAATTGCTGACATGGAATCCTATTATGGAAAGTGCAGATATAGAGAGGACAAAGTGGTATAATACACTGCTTTTATATGCGTTAAATACTAAGGAAACAGAAGAATCACTTAAAACGGATCCCGATGTAAGATTAGTGCCGTTTGCCGTGGAAAAGATTGTTGTACCTAGATTAACATCTATAGTTGAGAGAATTTGGGATCCAATGTCTACATCCCAAACGCTGCGTCTTGTAGGCACAATAAATCGCCTTATCAGGGAATATCCAAACTTAAATGATACCAGTAAACAATTAGAAACATTATTTAATACTATACTGGAGAAAATTAAGTCAGCAGTTGAAAATGACGTTTTTATACCAATTTTTCCAAAGCAGGTTTTAGATACTAAGCATCAATTTTTTCAAAGACAATTTGCCATGGCTGTGAAACTTCTGAGGAATCTATTAAGCTGGCAAGGTCTTCTTGGAGAcacacaattaaaaaatctagCTCTCGGTTCATTATTAAATCGATATCTTTTAGCTGGTTTAAGAGTGTCCGCCCAAACTGATGCTTTATTTAAAGCAAACATGGTAATGAGTACACTTCCACGAGCATGGTTACAAGGTGAAACAATAGAACATTTAAGAATGTTCGCAACGCTTATTCATCAACTTAGCGAGCAATTGGATCAAGCAAATCCAGCGCATAAATCCGGCGTTTTGTTACCATCTGGAGCGTCGTCCTCGTGGGGTTTTCATGGGAAACTCGTTGTTCAAGCAGAAGAAAATGTTGCTACGATACAGCTCCAATCGTTGAAAATGAGTATAAACAATGGTAAAATCTATGAAGAAGACGAACAAGAAAAGGCAGAAGCAGAATGTCAAGATATTCCAGATGATATAGACGATCTTTTGAAACCATTTCAAATATCGTACAATAATGGGCTCGTTGAAAATTTTAGTACAGAAGCTGCCTCTCCTTGGTCTACAAACATAAAGAGGAGTATCGCAGGAATTTTGCAATTGGATTTGTCCAGCTTGGAAAAGGAAACAGCATTTCATTCAACCGAAagAAATCATTACGGCCAATGCAACATTGAATATGTTACTAATCCTGAAGAAGAAGATGAGTGGCTGATAAGAAAATTTGTAGATCCTCGAACGTGCCTCGGGCATCCTCATTACACGTGGTCAAATGTTCCTAAGATGTTATGTCCTAACGGTGAtcaaAATCCAATACTTAAGTCCAGTGAAAGATTGTATAAAGTTAAGATAAATGGGCCCTTAAatgagattttatttgttaatgCAACTGGAGGCATATACGTCCAACCGTTTCAAAGCTTCGGAGAAGcacaatttcattttacaagACAAACCTTTACACTAAATTCGCTGAAAGATATAGGAAATAAGATACCTGTTAAGGATTTACATTTCAAAGTTCTACAGCATGAACTTCCAGAAGTCGATGTCACCCAAGGCAGGGGTAATCCCGATAAGAATACCGTTTTTAAATCTGTAaCACGTTTATTAGATCGTTTAAGTCAGAGACTCGAAAATCCTGGTTTGGATACAGAGACTGATAATTTACATAACACTACAGTTACTGTGTTGCTTCATTATCTTGAAATGCTGGATGTTGCCGATTTGCGTAGTGCGTATACAAAAATATCGGGGACAAGTTATAAAGAAGAAACGATACGGAATATGTTCCTCGAAGCTCTTCCACAAGTTGGTACCAAGGAGGctgcattatttatattagAAGTAATTCAAGAGAAGAAAGTGTCAGATATGTCTGCAATTCAACTTCTAACGCAATTACCATTTCATATACGAAAACCTGATGTTCAATTACTAGTAAATCTGCAAGTATTCTTAAATTTACCAGATAAAATATCGATGGAAGTTCAAGGCACTGCCATTCTTACGTACGGCACgttaatttataaaacgtGTTTATTGTATTGCCCATATGAAATGTTAGATGATTACGTACGTTTATACCTCGATAAATTTACAGAGACGACGGAATACGAGAAGAAAATGATTTGGCTAGAGGGATTAGCAAATATACAGCTCGGAAGAGTAGTTGAATTCTTAGAACCAATTGCAAGTGGCAGTAATTCAGAATCACGTCATTTTCGAGTTCTTGCTGCATGGGCCTCCCTTTCTACTGCCCCTTTACGACCTGATGTTATATATCCGGTCTATTGgccaattttaataaacagaactgAACACTTAGAAATGAGAGTAGCCGCATTGACGCTGCTTATTGTTTCTAGTCCTACCCCAAGCAGATTAATATCGTTGTACTGGTACATGAAAAGTGAACCCAGTCCACATTTGTATAACtatttttatactattttaAGATCCATGGAACGCACAACACATCCTTgttatgtacatatTGGTGTGATAGCGGCGCAATTCACACGAGTACTTCGTCCGCCAAAAAATCAGTATTTAATTACTGGTAACTACTTATTTGATTACCAGGATACGTACAGAAAATTTGGCGCTTTGATACATGGTATTGTTATTGCAAACCCCTTGACAAATATACCCGAGGTTTTATATGTAACAATTAACACTTATGGAAGTGGAGTCAATATCAACCATGTATCCttGTATATTAAAGCTGAAGGTCTTCCGCAAGCCTTATCAACATATTTGGATAGTCCAAGCCAAGTAAAGGACCTACTGAAGACGTTTAAATTAGATCGAAAGGAAAATGGACCTGTACATTTGGAAGTAATTGCCCGTATTCAAGAGAAAACAGTCCTATGTCTTCATCTCAACGAGACGAATATTATTAAAGGATTTAAATATCTCTCCTCTTTGCCCGATAACATCTATAACATATATCAAAATATGGAGTTCCATGTTAATCAGCAACGCATTAATGTTCCATTAACGACTGAATCAATACAAGTCACAGATCTGGGAGCAAACGTTAGacttgcaattactgcaacATCATTATTTTCAACGAGAGGAAATTTCACGCATGTTTCAACTGGTCGCAATAATCATGTTATACTAcgAACATCCGTTCATAAGTCggaaaaaattgaaagctATAATCCTTTAATTGATACATGGCATAGTGCAGAAAGAATGCATTCTATCCATGGATATCTTCCAATCAATATTACACTTGGATTTGACGATCGTCCATTCATTTCGTATAACACTCCTGGAGAACATCTTAAAATGGGTATAACAACTCATGTCAGAACatctactaatataaaggggATAAACATTGAATCAAAGTTACATCAAATTTGCCCAACCTGCCCGCAGTTATACATCGTTACAAAATCACCAACTTATAAACCAATGAGCACAGACCTATTTCAAATTGAATTGGCAGAACTAGGTGGTCAATTACACGTAAAACTTTTCGACTGTGAAAATGTAATATCACGAGAGAAACTAATTAGAGACGTACTTTCTGCGCATCGGGCTAATTATCCTATTTGGCCGTTTCTCGAACTCGCTTTTACATCGCTTCATTTCTTAGACTATTGTACGTATGTACCGCCCAAAGGTAGCTGTGGCTTAGCCGCTTATATTAGTACATTGGATTCCCAACGTACTCAAGTAAAATTTGAATACATTAGAGGTCCAAAGCATCATATGTTATCTCTAACACATCGCGATTTGGAATCATCAAATATTCTTCAGCAGTGGAATTTAGCTATCCTTTACGAGATTACTAGTTGGATATCAGATATGATCAAAATTAAGGCAACCAGAGTTGTTCCAGGTGAACAGGTTTTAAAGTTTTGTTTAGAGGCGGAAAAAGAAATACCTTGGGAATGGGATTTTCTAAGCACTAGGCCAAGTGACCCCGCTAGAATTGGATTGAATGCTGTTTGGGGATACTCAGATACAGCAAAGGGTAAATGCAGTGGTTCCTCCGTTACATTAAACTTGCTAGGCGAGATTAGTAAAGAACAATTGGAGGATGCTAAAGAACCAGAATGGCCCTATAAAGAATGTCGAAGAGAGTCTGAAGGAAAACGGCATAGTCCATTTTCTGATGCTTGCTACGAAGCGTCGAGGGAATTATCGACCTTGAGAAAATATCAAATAATCGCGCAACATGAAAATATACCGGAAGATCTCATGAGATTAATCTGGAAATTCCGAGCTTTTTACGATCTAATCGGAGGCAACAGCAGTTCTGACCCTATTTCAAAAGGGTTTGTTGTGACAGCGAAATTTCCAAAAGAATCGGATATTGGCGAATTATCACTTAACAACGACAAAATTGCcattgaatataattataatattatagatTACTTTTTGACTAGAACTCGAATTCACAAGTACATGGACTTAGCGATCCTAAAATCATTATTTGGCACGTGTGTCATCACACCAGATTATATCAGGACAATTCACAACGTATCCTATTCGTTCCGGAACAAACCTGAAGTTCTGTTGCTTGGCCAATGTTACAGTGAAAATCCAATATATGCATTAACAGCACGGAATGATATACACGGTGTTAACGTCAACGTATATGATGAAACAGATACACTACGAATTGTTCCCAATCAATCTGGAGGaacattgtataataatacaatgtatattCCATTACAACAGAGTTTTATGTTTCACTCATTGGGTTCTAAGAGAGTGAGATTGGACAGTAATACTATTGATTTAATAGTTCCTAATCTTTATTTATATATGCATTGGACACAAGAACAAATTCTTCTGTTCTTTCCAACGTATCTATTAGAATTTAGTTGCGGTATATGTACACTATCTACTCCCGATACTAACGATATGTATGAGAAGCTATAA
Protein Sequence
MSLFNKPKRNIRRRHFNDDDEDNENRNEVEDTQPVKFKAKKKDKPKQTLLSFGEELEEADDGEVFKVKKSSRSKKLMKQLDHERRKKKGEEKMQVDSEQANMSIKQEKDLEIKTDDLVVKIKNTGPLILNGRAALAAGKDDYTSDEEEDEPRSHKFRRNTDKADTMKILLESGCIPDAAMIHAARKCRQKARELGTDYIPIEEQSDDKSKSRLIREEDHDRSDDDDSQDRIDMTVNTEARDKEKRREAFLASQVPLKLSDDESEHENEEEEWEAQQIRKGVTGAQIAAAQQDSMMQQQYSMGMNVNQMMGTGISLEMVMMPAPPPPPAIQPPDPTKIVPITPQEVVTKMRTRLDSLKEVHRRHQLDQDCLEQELGQTMKELDDGEIRAPQLAQRFRYYQELRGYVTDLVECLDEKLPLIVGLEQRWLDLYSERATELMERRRQDTRDQAEEITTAARGQPIRRGPEVEARIRRATEREGRRARRRRARELAPTLPKHIDGMSSDDEVTEQQNLAFKQTKDEIDNESKEIFADVMDEYCTIRGILSKLESWRETDRDAYMEAYVSLCIPKIISPIIRLQLLTWNPIMESADIERTKWYNTLLLYALNTKETEESLKTDPDVRLVPFAVEKIVVPRLTSIVERIWDPMSTSQTLRLVGTINRLIREYPNLNDTSKQLETLFNTILEKIKSAVENDVFIPIFPKQVLDTKHQFFQRQFAMAVKLLRNLLSWQGLLGDTQLKNLALGSLLNRYLLAGLRVSAQTDALFKANMVMSTLPRAWLQGETIEHLRMFATLIHQLSEQLDQANPAHKSGVLLPSGASSSWGFHGKLVVQAEENVATIQLQSLKMSINNGKIYEEDEQEKAEAECQDIPDDIDDLLKPFQISYNNGLVENFSTEAASPWSTNIKRSIAGILQLDLSSLEKETAFHSTERNHYGQCNIEYVTNPEEEDEWLIRKFVDPRTCLGHPHYTWSNVPKMLCPNGDQNPILKSSERLYKVKINGPLNEILFVNATGGIYVQPFQSFGEAQFHFTRQTFTLNSLKDIGNKIPVKDLHFKVLQHELPEVDVTQGRGNPDKNTVFKSVTRLLDRLSQRLENPGLDTETDNLHNTTVTVLLHYLEMLDVADLRSAYTKISGTSYKEETIRNMFLEALPQVGTKEAALFILEVIQEKKVSDMSAIQLLTQLPFHIRKPDVQLLVNLQVFLNLPDKISMEVQGTAILTYGTLIYKTCLLYCPYEMLDDYVRLYLDKFTETTEYEKKMIWLEGLANIQLGRVVEFLEPIASGSNSESRHFRVLAAWASLSTAPLRPDVIYPVYWPILINRTEHLEMRVAALTLLIVSSPTPSRLISLYWYMKSEPSPHLYNYFYTILRSMERTTHPCYVHIGVIAAQFTRVLRPPKNQYLITGNYLFDYQDTYRKFGALIHGIVIANPLTNIPEVLYVTINTYGSGVNINHVSLYIKAEGLPQALSTYLDSPSQVKDLLKTFKLDRKENGPVHLEVIARIQEKTVLCLHLNETNIIKGFKYLSSLPDNIYNIYQNMEFHVNQQRINVPLTTESIQVTDLGANVRLAITATSLFSTRGNFTHVSTGRNNHVILRTSVHKSEKIESYNPLIDTWHSAERMHSIHGYLPINITLGFDDRPFISYNTPGEHLKMGITTHVRTSTNIKGINIESKLHQICPTCPQLYIVTKSPTYKPMSTDLFQIELAELGGQLHVKLFDCENVISREKLIRDVLSAHRANYPIWPFLELAFTSLHFLDYCTYVPPKGSCGLAAYISTLDSQRTQVKFEYIRGPKHHMLSLTHRDLESSNILQQWNLAILYEITSWISDMIKIKATRVVPGEQVLKFCLEAEKEIPWEWDFLSTRPSDPARIGLNAVWGYSDTAKGKCSGSSVTLNLLGEISKEQLEDAKEPEWPYKECRRESEGKRHSPFSDACYEASRELSTLRKYQIIAQHENIPEDLMRLIWKFRAFYDLIGGNSSSDPISKGFVVTAKFPKESDIGELSLNNDKIAIEYNYNIIDYFLTRTRIHKYMDLAILKSLFGTCVITPDYIRTIHNVSYSFRNKPEVLLLGQCYSENPIYALTARNDIHGVNVNVYDETDTLRIVPNQSGGTLYNNTMYIPLQQSFMFHSLGSKRVRLDSNTIDLIVPNLYLYMHWTQEQILLFFPTYLLEFSCGICTLSTPDTNDMYEKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01417703;
90% Identity
iTF_01068971;
80% Identity
-