Basic Information

Insect: Nomada panzeri
Gene Symbol: -
Assembly: GCA_951802685.1
Location: OX637841.1:6712905-6720560[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 4.8e-05 0.0053 17.6 1.4 1 23 456 478 456 478 0.96

2 16 0.0029 0.32 12.0 1.6 1 20 484 503 484 506 0.94

3 16 1.2e-05 0.0013 19.5 1.4 1 23 512 534 512 534 0.98

4 16 6.9e-05 0.0077 17.1 4.4 1 21 540 560 540 562 0.95

5 16 9.3e-06 0.001 19.9 5.6 1 23 568 590 568 590 0.99

6 16 2.1e-05 0.0024 18.7 5.3 1 23 596 618 596 618 0.97

7 16 8.1e-05 0.009 16.9 6.9 1 23 624 646 624 646 0.96

8 16 2.9 3.2e+02 2.6 0.3 1 9 652 660 652 660 0.89

9 16 4.8e-07 5.4e-05 23.9 2.9 1 23 662 684 662 684 0.98

10 16 7.2e-06 0.0008 20.2 7.8 1 23 690 712 690 712 0.98

11 16 2.3e-05 0.0025 18.7 9.1 1 23 718 740 718 740 0.98

12 16 3e-05 0.0033 18.3 7.5 1 23 746 768 746 768 0.98

13 16 0.0014 0.16 13.0 8.8 1 21 774 794 774 796 0.94

14 16 1.1e-05 0.0012 19.7 0.4 1 23 802 824 802 824 0.98

15 16 0.026 2.9 9.0 4.5 1 23 834 856 834 856 0.98

16 16 4.2e-07 4.7e-05 24.1 1.3 1 23 862 884 862 884 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	4.8e-05	0.0053	17.6	1.4	1	23	456	478	456	478	0.96
2	16	0.0029	0.32	12.0	1.6	1	20	484	503	484	506	0.94
3	16	1.2e-05	0.0013	19.5	1.4	1	23	512	534	512	534	0.98
4	16	6.9e-05	0.0077	17.1	4.4	1	21	540	560	540	562	0.95
5	16	9.3e-06	0.001	19.9	5.6	1	23	568	590	568	590	0.99
6	16	2.1e-05	0.0024	18.7	5.3	1	23	596	618	596	618	0.97
7	16	8.1e-05	0.009	16.9	6.9	1	23	624	646	624	646	0.96
8	16	2.9	3.2e+02	2.6	0.3	1	9	652	660	652	660	0.89
9	16	4.8e-07	5.4e-05	23.9	2.9	1	23	662	684	662	684	0.98
10	16	7.2e-06	0.0008	20.2	7.8	1	23	690	712	690	712	0.98
11	16	2.3e-05	0.0025	18.7	9.1	1	23	718	740	718	740	0.98
12	16	3e-05	0.0033	18.3	7.5	1	23	746	768	746	768	0.98
13	16	0.0014	0.16	13.0	8.8	1	21	774	794	774	796	0.94
14	16	1.1e-05	0.0012	19.7	0.4	1	23	802	824	802	824	0.98
15	16	0.026	2.9	9.0	4.5	1	23	834	856	834	856	0.98
16	16	4.2e-07	4.7e-05	24.1	1.3	1	23	862	884	862	884	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAGCATGCATTGCCAGCGACTACGCAGGCACAACAAGAGGATGTAAACGCGGGTCAAAGTGGTCGTCCTTCATACCCAGGTGGTTTGGCTACAGCAACCAGTCTTGGCAATGTAGGGAGTACCCCGCATTCATCCGCGGACCTGCGTGTAGGTACAGCCGTAGCGTTAGCCTCCTCGGTAGCTAAATATTGGGTCCTCACGAATCTGTTTCCTGGACCGCTACCTCAGGTCTCGGTCTATCATCATTCCCACCACAACTCCTCACATAGGAGTAGTGGAGGTGGAGAGGCATCTTCCAAAGAACCAGCCTCTTCATTGAACCAAGAAATGGCGTTGACATCCAGTTCGCACCATCAGTCAACACCTACACACCATCATCATCAACCTTCAGTTAGCAGTAGCAGTCATCATAGTTCTTTACAACCAAATCCACAGcaGATACCAGTTTCTCTGCCAGGCCTTAATTTAGACGGAGCACACATACCTGCCAGTGTGAGTCATTTGCAGGCAGCACATGCACAAATGCAGCAACAAATGCAGGCagcacaacaacaacaacagctgcatcaacagcagcagcagcaacagcaacaacctcaacaacagcaacaatcTCACCATCAAATGCAAAATCATCAGAATGCTCAGAACAGTGGACCAACTGCACATAATCAAAACGCACAGAGAGATGATAATAAGGTGAAAGACGAAGGTGGAAGTTGTACAACTGAACGTTGTAGTGACAATCAAGTTCACTGTCAAGTTCAATGCGACCTCCAATTGCAAACAACTCAAGAGTTGCAACAAAGTCTCatgcagcagcaacagcagcagcagcagcaacaacaacaacaacaacagcagcaacaaatTGGCGTAAATATAAGTGGAAATACATCGACCGAAGGTGGAAATCAAAACAATGCTGAAAAGcctgaaaaggaaaaagagcTGCGTCAACTAAACATGGCTCAATTCCAAGTACCCGATTTAAAACCAGGAGGTCATATGATGGATGTTAGAACGGCTGATGGTTCTGTTGTGAAAATCAGTGCTGGAAATGAGCAAGATTTAGCGAAGACCCTAGGTGTTGAAATGGTGCAAAATATGTATAAGGTTAATGTCGAGGACATTAATCAGCTTTTAGCATATCACGAAGTATTTGGAAAATTACAAAGTGAAATAGCAGCTGGTACAACCTTAGTTGGAAGTACAGTTCCTACTCAAACAGTTACCACAATACAAAATGGAACTCCAATTGTGCAACAAGTACAATTAAATAAGTTCGATATTAAATCGAGCGACGGTGAAGCAACACCGGGACCAAGTGCTTCGCCTGTGTCAGTTGGAAGTCATGCATGTGAAATATGTGGAAAAATTTTTCAGTTTCGTTATCAACTTATCGTACATCGTCGATATCACACGGAGAGAAAACCTTTTACTTGCCAGGTGTGTGGCAAAGCCTTCTTGAATGCCAATGATTTGACCCGACATGGGAAGTGTCATCTAGGTGGATCAATGTTTACCTGTACAGTTTGTTTTCATGTGTTTGCAAATGCACCGTCTTTAGAACGTCACATGAAGCGACATGCTACCGATAAACCATACAATTGTACCGTTTGCGGAAAAAGCTTTGCAAGGAAGGAACATTTGGATAATCATACGCGTTGCCATACTGGAGAAACACCTTATAGgTGCCAGTACTGTTCGAAGACGTTTACTAGAAAAGAACATATGGTAAACCATGTTCGCAAACACACGGGCGAAACACCGCATCGGTGCGATATTTGTAAAAAGAGCTTTACCCGCAAAGAACATTTTATGAACCATGTTATGTGGCACACGGGAGAGACTCCACATCATTGCCAGGCCTGTGGGAAAAAATATACACGTAAAGAACATCTCGCAAATCATATGCGTTCGCATACCAATGATACACCGTTTCGCTGTGAAATATGCGGTGAGACCCCATTCCGCTGTCAGTACTGTCCAAAAGCATTTACGCGGAAAGATCATCTGGTGAACCATGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCCTTCACGAGGAAGGAACATTTGACAAATCACGTGCGTCAACACACAGGCGAATCGCCACACCGATGCCACTTCTGCTCCAAGTCATTTACTCGTAAGGAGCATTTGACGAATCATGTACGAATCCACACCGGTGAATCACCTCACAGGTGTGAATTCTGCCAGAGAACGTTCACCAGGAAAGAACATCTAAATAATCATCTCCGTCAACATACCGGAGATTCGTCGCACTGTTGCAACGTTTGCTCGAAACCGTTTACAAGAAAGGAGCATCTTGTAAACCATATGCGATGTCATACTGGTGAACGTCCATTCGTATGCACAGAATGTGGCAAAAGTTTCCCATTGAAGGGCAATCTACTTTTCCACATGCGTTCGCACAATAAGGGTAGTAACGCTGAGAGACCGTTCCGTTGCGACCTTTGCCCAAAGGATTTCATGTGCAAGGGACACCTGGTGTCTCACAGACGATCTCATTCGGACGAACGACCGCACAGCTGTCCAGATTGCGGCAAAACATTTGTCGAGAAGGGCAATATGTTGAGACATTTGAGAAAACACGCGGCTGAAGGGCCTCCTACGCAAGTCAGCACACCGTCAGCCATTCCTCAGTCTGGTGTTCTGCCGATACCAGCGGCTGCAGTCCTAGTAGGCCATCCCCTGGCACCGCCTGCGCCGCCCGTAGTGCCGCAACACACGGTTGTTGTGCCTACTCCTCCGGGTGTATTGACCTCCTACTAA
Protein Sequence: MNSEQHALPATTQAQQEDVNAGQSGRPSYPGGLATATSLGNVGSTPHSSADLRVGTAVALASSVAKYWVLTNLFPGPLPQVSVYHHSHHNSSHRSSGGGEASSKEPASSLNQEMALTSSSHHQSTPTHHHHQPSVSSSSHHSSLQPNPQQIPVSLPGLNLDGAHIPASVSHLQAAHAQMQQQMQAAQQQQQLHQQQQQQQQQPQQQQQSHHQMQNHQNAQNSGPTAHNQNAQRDDNKVKDEGGSCTTERCSDNQVHCQVQCDLQLQTTQELQQSLMQQQQQQQQQQQQQQQQQQIGVNISGNTSTEGGNQNNAEKPEKEKELRQLNMAQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKSSDGEATPGPSASPVSVGSHACEICGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFLNANDLTRHGKCHLGGSMFTCTVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQACGKKYTRKEHLANHMRSHTNDTPFRCEICGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSTPSAIPQSGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01066407;
90% Identity: iTF_00773969;
80% Identity: -