Basic Information

Insect: Nomada lathburiana
Gene Symbol: RREB1
Assembly: GCA_963667235.1
Location: OY763904.1:7214477-7224842[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0061 0.46 11.0 0.1 1 23 67 89 67 89 0.96

2 16 0.00026 0.02 15.4 0.0 1 23 103 125 103 125 0.97

3 16 1.2e-07 9.2e-06 25.8 1.1 1 23 131 154 131 154 0.98

4 16 0.012 0.93 10.1 0.1 1 23 248 272 248 272 0.95

5 16 0.15 11 6.7 2.9 2 23 278 300 277 300 0.94

6 16 1.8 1.4e+02 3.3 0.6 1 19 356 374 356 376 0.89

7 16 0.19 15 6.3 0.1 1 23 489 511 489 511 0.96

8 16 2.6e-05 0.002 18.5 0.3 1 23 520 542 520 542 0.98

9 16 0.0012 0.091 13.3 2.8 1 23 548 571 548 571 0.97

10 16 0.00044 0.034 14.6 3.0 1 23 925 948 925 948 0.97

11 16 0.00063 0.048 14.1 0.1 3 23 1223 1243 1221 1243 0.97

12 16 0.56 43 4.9 6.0 1 23 1249 1272 1249 1272 0.97

13 16 0.0039 0.3 11.6 2.2 1 23 1308 1332 1308 1332 0.97

14 16 0.45 35 5.2 4.8 1 23 1416 1439 1416 1439 0.96

15 16 0.011 0.82 10.3 0.4 2 23 1488 1509 1487 1509 0.94

16 16 1.3 97 3.7 8.2 1 23 1515 1537 1515 1537 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0061	0.46	11.0	0.1	1	23	67	89	67	89	0.96
2	16	0.00026	0.02	15.4	0.0	1	23	103	125	103	125	0.97
3	16	1.2e-07	9.2e-06	25.8	1.1	1	23	131	154	131	154	0.98
4	16	0.012	0.93	10.1	0.1	1	23	248	272	248	272	0.95
5	16	0.15	11	6.7	2.9	2	23	278	300	277	300	0.94
6	16	1.8	1.4e+02	3.3	0.6	1	19	356	374	356	376	0.89
7	16	0.19	15	6.3	0.1	1	23	489	511	489	511	0.96
8	16	2.6e-05	0.002	18.5	0.3	1	23	520	542	520	542	0.98
9	16	0.0012	0.091	13.3	2.8	1	23	548	571	548	571	0.97
10	16	0.00044	0.034	14.6	3.0	1	23	925	948	925	948	0.97
11	16	0.00063	0.048	14.1	0.1	3	23	1223	1243	1221	1243	0.97
12	16	0.56	43	4.9	6.0	1	23	1249	1272	1249	1272	0.97
13	16	0.0039	0.3	11.6	2.2	1	23	1308	1332	1308	1332	0.97
14	16	0.45	35	5.2	4.8	1	23	1416	1439	1416	1439	0.96
15	16	0.011	0.82	10.3	0.4	2	23	1488	1509	1487	1509	0.94
16	16	1.3	97	3.7	8.2	1	23	1515	1537	1515	1537	0.98

Sequence Information

Coding Sequence: ATGATGAAGAACCGTGCCGAAGGGATTGGTAGAGAAACAGGGAAAGAGGGAGATGAAGGACAAAGAAAGAGGGTTCTGGTCGACGCCAAACAGTCGTTGGAACGACTTACTGTCAAGAACAGCCAAGAACAGGAGAACGAATCGCAAGCCGATGCTGATTCTTCGCCATCCAGTATCGAAGTCGTCCCGGAATGTGCACACCCCTGCCCCGCCTGTCCAATCGTCCTAAACAGCTCCAGAGAATTAACAAACCACCTACGCGGCCATAATTCGCCCCGCAGCACCGATTGCAGCGGCGAGGATGATTACATCTGCGGCGTGTGCAACAAAGTGCTCAGTTCGGCCAGTTCTCTGGACAGGCACGTTTTAGTGCACTCCGGGGAACGTCCATTCAAGTGCAAATACTGCGACATGGCGTTCACGACAAACGGGAACATGAACAGGCACATAAGAACGGCCCACAGAAGCGCGTCGCCGCACAGCTGCACGGACTCCGAAGGGAGCAGCGACTCCGAGAAACAATCACAGAGGCGGCATTTGGAGGAGTACAATAACAACGAAATCACGAAAAGGAACTCCCCGGATTTCATCGAGAGGCAGGACGAGCATATGCCGAGCCCGTCCGGCAAGAGGAAGTGCCCGGATTACTCCAGCGACAACGAGAATCAAAAGAGGCACAAGATCTTGCTGAGCAACTCGAGGACGGAGATCAAGTCGCAGCCGGAGGACAGCCAGGACGTCTATATATGTCCGGTATGCGGCAGGCAGGATTTCGCCACCAGCGCCCTCCTGGAGGCACACCTGGAGCGCTGCCATCCGGAGTTCCCCACGAAATGCGACTCCTGCAACTTGTCGTTCAAGAACCACAGGGTCCTGAATCTGCATCGATTCATGATACACTTCGCCGAACATTCTATAGGCAGCCCGGCGAGAAATCTTCGGAATTCCATAGTGGGCTTCAACGACCTGACCTTCGTCGACTTCTCCTCGGACAAGTTCCCGGCGATCGCCAGGGCGGTCTGCGAGCAATCCCTGCACAGACCGGCCTCCGGCGAGGTCGCGAAGTTTCAATGCTCGAAATGTCTCCGGGCGTTCCCTTGCAGATCAGCGTTGGACGCCCACGAAACGGACTGCGGGATGACGAACCCGCAGAGCAGAATCGCGGACGACAGTCAGTCCAGGAGGGACGACTTTTTCGCCAGGCTGGATCTCCAGAATAAAGCCGCCCTGACGGAAGCCAAAGAGGGGAAGGATTTGGCTGATATACAGAGTATCATATCAGTCACGTCTGGACCTATCCTACAAAATTTCCCCCGTTCCGACTCCAGTACACCTGAGAGCAACAAGTTCAATCCCAGTGCCAGTTCCTCCAGCTCCTCGGGTACATTCTCCACGGAGTACCACGAGGAGGAAGCCCAAGACGCGTTCGCCGCGGAGTTCAGAAAGATGAAGTTGAAGGGCGAATTCCCCTGTAGACTCTGCTCGGCGATATTCCCCAATTTGAGGGCGCTGAAGGGTCACAATAGGGCGCACATGGGCGTCGGACCTGGCATGCCGTATCCTTGCAACATGTGCCCGTACACGAGCTCGGACAAGGCCACCCTGGTCAGGCATCTGAGGTCACACAACGGCGACAGACCTTACGAGTGCTCCCTCTGTAATTACGCGTTCACGACCAAAGCCAATTGCGAGAGACACGTGAGGAACAGGCATGGGAAATTAACGAGGGAGGACATCAAGAGCGTCCTGATCTACCATCCGAACGAGGATTCCACGAACGAAAGCGCGGAGAGGACGTCCCCAAGGGTATCGAAGGACGATGTCAGGAAGAGCCTCATATTCGCGCAGGAACGTGACGATCTCCAGCATCAGGCGCAGATACATTACTCCTCACCGGCGCACATCGACGGCCGTGGCGAGATCAGGATAATAGACGATGCCAAATTGAACAACACGGTGCTGTCCATGCAGAACATGAACCATTTCGAGAAGATCAACGTGTTCTCGATGCCGAGCCAGTCGCTGGAGGCACCGCAACGAAGCGTGGACGAGAGGCCGGACACCAGGTCGGACTGCTCGAAGCCGGACGACGACGCGGAGTCCAGGTCGTCAGAAGCGAGTATATCTCTAGTCAACGATATCAACTCAGATTCGCACCAAAGAATACAAGCTAGTCCGATGAATCTGAAGAAGAGGTCGAGTTTGTCTGACACCGCTGGCGAGGACGGGCCCTTGGATCTGTCCATGGACGTGCTAGATCTCAGCAAGAAGTCCAAGGAAAGGGACGACGATCTTGGCGTGTCTGGATTGCATGAAAATGAGTTCGCAAGGAACCAGGAGCAGCTGTACAACGCGACCAGTCAGCTGCTATTAACGGAGGCGATACTAAAGGCCAGACACGGTATTGGAGCTGGACTTTTGCCACCGTACATGTTCAACCCTCACGTATTCGGCCAGGACTACACTACGAAGGAAAGGTTGCAGAGAGAATTGGTCAGAGGTCTGCAATTGACCAGTGGAGGGACATTGGTGGAGCCATCCATCGTCAACACTGGATTCCCAGCTTTCTGTCAAGGCAGAGACTTCAATTCGCAGGCTGTCGGCGAACAGAGCGAATACGCCAAGCTGATCTCGTCTAAAATGGCGAATCAGGGTCACTCGAGTAGAGACAAGCCTGATAATCTGCCGTCTTCGAACTCCGTGAAGATGGTGATTAAAAATGGTGTCCTGATGCCCAAGCAGAAGCAAAGACGATACAGGACCGAGAGACCTTTCACCTGCGAGCACTGCTCTGCAAGGTTCACGTTGAGAAGCAACATGGAAAGGCATATTAAACAGCAGCATCCGCAACACTGGAGCCAGCGGCCCAGAGGAGGCCATTCGACTAGGGGAAGACCACCGTCGAGTCATCCGACACTGCTGCAAAACCTTGGACAGTCTACGTCGCAGGTAAACCAGAACTATTCAAACATCCTGCCAAAGGTCGATCAATCGCCAGCGAACTCGGACTTGGCTAAGCATCCCATTTCGGACCAAGTGAAATACGCAATTTTGGCTCAGCAGTTGAAGGCGAATAAAACGGAAGACAACGATTCAGAGGAAGAACTGGTTATCGACGAGGATCCGCAAGAGAAGGATCACCAGGAATCTCAAGAGCAGGAGAAGAGTCTGCTTAGGGGGCAACTAGAAGGCACTGAAACGGGAAAGGAAGTCACCGTAAAAGAGGAGGTAATGGAACCCATGAACTGTGACTCACAGGAAGATGCTGTTGAACCATCGAACAACGAGGAAGGTGAAGACGAAGGGCCGAATACTTCTGACACAGAGAAGCCCGCAGAAACGGAGAAGTCCGACGCGAGCTCTAATCCAGTTCTGAAGACAGAGGCACTTGAAGTGAAAAATGAGAAGGTAGAGGACGGAACGACAGATTTAGCAAGTGTGTCAGAATTGCTGGACAACGCCTCGCAACAGTATCAACAATTTCAACCGCAATATCTGAGCGACGAGGAAGGATTGGTCGCCTCCAACAGTGACTGCAATAATTCCGGCAGCGACGAGAAATCTGATTCGGTCAACTCGCTAAACTCAGTAAACGCGTcgtcgaaaaaaaagaagaagaagaagaagaagaagagtgCGTATTCGATGGCGCCTAATCGTGTGATCTGTCCGTACTGCGAGCGACCGTTCCCCTGGACGTCTTCACTCAGAAGACACATCCTCACGCATACCGGACAGAAACCTTATCAGTGTGTCCACTGTTCGCTGCTATTCACTACCAAATCGAATTGCGACAGACACCTGTTAAGGAAACATAAGGCCAACCCGAACAAGATGCGCAGGGTTAGAAATTCTTCTTCCCCGGATTCTCAAGCAGTCATCAACAACTCGTTCTCCATGAGAAATGTTCCCGAGAGGCCGTACAAATGTAACCAGTGCCCAAGTTCGACCTTCTCTACGTTGGGCAATCTAAAAAAGCATCGTTCCACTAAACATGCCCGGAAAGTTACATCGAGGCCAGACAGCCCATCCAGCGAACCTCAGAACAGCCCCCAGGAATGTTCTAAACAGAATAACGAACAGAGCGATTACGACAGCCAATCCTCCAGTGTCTCCGAAGGGACAGAAGTGTCCTCGATGGTAGAAATTGCTAAGACCCCAAATAATACCTCGTCGTCCACCAATGATACACCTAGATCAAGGAGACCATCTCCTAGATCTTCACCTGGGCCCAGCGATGTGCCTTTCAAGTGTCACCTGTGCGACTGCGGCTTCGCGGACAGACAGGACTGCCTGGAGCACATCAAAGTTAATCACAAGAGATCCTACGAAATGTTAGTTGCAAAGGGAGCCTTAGACATGGACATTGACGCCGTGGAGGACCAACAACCCCCGCCACAACAGACCAGCGATGGAGAAGAGAAGAGGGGACGGTTTCCGGATTACAGCAACAGAAAGGTGGTCTGCGCATTCTGTATGAGGCGATTCTGGTCCGCGGAGGATCTCCGACGTCACATGAGGACCCATACCGGGGAGAGGCCGTTCTCATGCGATATTTGCTGCCGGAGGTTTACTCTGAAGCACAGTATGTTGCGGCACAGAAAGAAGCACGAGTCGATCGACTCCACGATGTATGTTGGCACCAGCGGAGACGAGGAAAATTCTCCTACACAGCCGTCCAGCATCGCTCTACGTAGCCAGCAACAACCGCCTGTACACGCGACGAACAACAACGGAAACCCCCGACTTCAAGACAGAATCTCTTTACCGACTGTCGCACCAGTCGTAACCAGTGATGCAGTGTCTAGTGGATTAATACGATTTAATCCGTACGAAAAATTAACCACTTTGTCAGGGAAACTGGCTAGTATTCCACAAAATGTGAATTCAGAAACGAACGAGAGCGCAGATAACGATTTGATTTCTAACCTCCTAGGAATTAGAGATAAGAACTTTATTGACCGCGTACTACAGGCGTCCGCTGATGATGCTGCCAAACTATTGGGGGTGAAGCACAGCCATGAATGA
Protein Sequence: MMKNRAEGIGRETGKEGDEGQRKRVLVDAKQSLERLTVKNSQEQENESQADADSSPSSIEVVPECAHPCPACPIVLNSSRELTNHLRGHNSPRSTDCSGEDDYICGVCNKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHIRTAHRSASPHSCTDSEGSSDSEKQSQRRHLEEYNNNEITKRNSPDFIERQDEHMPSPSGKRKCPDYSSDNENQKRHKILLSNSRTEIKSQPEDSQDVYICPVCGRQDFATSALLEAHLERCHPEFPTKCDSCNLSFKNHRVLNLHRFMIHFAEHSIGSPARNLRNSIVGFNDLTFVDFSSDKFPAIARAVCEQSLHRPASGEVAKFQCSKCLRAFPCRSALDAHETDCGMTNPQSRIADDSQSRRDDFFARLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQNFPRSDSSTPESNKFNPSASSSSSSGTFSTEYHEEEAQDAFAAEFRKMKLKGEFPCRLCSAIFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSSDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNESAERTSPRVSKDDVRKSLIFAQERDDLQHQAQIHYSSPAHIDGRGEIRIIDDAKLNNTVLSMQNMNHFEKINVFSMPSQSLEAPQRSVDERPDTRSDCSKPDDDAESRSSEASISLVNDINSDSHQRIQASPMNLKKRSSLSDTAGEDGPLDLSMDVLDLSKKSKERDDDLGVSGLHENEFARNQEQLYNATSQLLLTEAILKARHGIGAGLLPPYMFNPHVFGQDYTTKERLQRELVRGLQLTSGGTLVEPSIVNTGFPAFCQGRDFNSQAVGEQSEYAKLISSKMANQGHSSRDKPDNLPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPSSHPTLLQNLGQSTSQVNQNYSNILPKVDQSPANSDLAKHPISDQVKYAILAQQLKANKTEDNDSEEELVIDEDPQEKDHQESQEQEKSLLRGQLEGTETGKEVTVKEEVMEPMNCDSQEDAVEPSNNEEGEDEGPNTSDTEKPAETEKSDASSNPVLKTEALEVKNEKVEDGTTDLASVSELLDNASQQYQQFQPQYLSDEEGLVASNSDCNNSGSDEKSDSVNSLNSVNASSKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCVHCSLLFTTKSNCDRHLLRKHKANPNKMRRVRNSSSPDSQAVINNSFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHARKVTSRPDSPSSEPQNSPQECSKQNNEQSDYDSQSSSVSEGTEVSSMVEIAKTPNNTSSSTNDTPRSRRPSPRSSPGPSDVPFKCHLCDCGFADRQDCLEHIKVNHKRSYEMLVAKGALDMDIDAVEDQQPPPQQTSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSTMYVGTSGDEENSPTQPSSIALRSQQQPPVHATNNNGNPRLQDRISLPTVAPVVTSDAVSSGLIRFNPYEKLTTLSGKLASIPQNVNSETNESADNDLISNLLGIRDKNFIDRVLQASADDAAKLLGVKHSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00625690;
90% Identity: iTF_01067122;
80% Identity: -