Basic Information

Insect: Nomada lathburiana
Gene Symbol: mecom-b
Assembly: GCA_963667235.1
Location: OY763904.1:7890395-7895656[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.016 1.3 9.7 0.4 2 23 51 73 50 73 0.95

2 9 0.19 14 6.4 0.2 1 23 80 103 80 103 0.93

3 9 9.4e-06 0.00073 19.9 0.4 1 23 109 136 109 137 0.91

4 9 3.8e-06 0.00029 21.1 2.6 1 23 143 165 143 165 0.95

5 9 2.3e-05 0.0018 18.6 5.0 1 23 171 193 171 193 0.99

6 9 0.00047 0.036 14.6 0.7 2 21 201 220 200 221 0.95

7 9 5.5e-09 4.2e-07 30.1 1.2 1 23 577 599 577 599 0.99

8 9 2.9e-07 2.2e-05 24.6 1.7 1 23 605 628 605 628 0.97

9 9 8.1e-06 0.00062 20.1 3.4 1 23 634 656 634 656 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.016	1.3	9.7	0.4	2	23	51	73	50	73	0.95
2	9	0.19	14	6.4	0.2	1	23	80	103	80	103	0.93
3	9	9.4e-06	0.00073	19.9	0.4	1	23	109	136	109	137	0.91
4	9	3.8e-06	0.00029	21.1	2.6	1	23	143	165	143	165	0.95
5	9	2.3e-05	0.0018	18.6	5.0	1	23	171	193	171	193	0.99
6	9	0.00047	0.036	14.6	0.7	2	21	201	220	200	221	0.95
7	9	5.5e-09	4.2e-07	30.1	1.2	1	23	577	599	577	599	0.99
8	9	2.9e-07	2.2e-05	24.6	1.7	1	23	605	628	605	628	0.97
9	9	8.1e-06	0.00062	20.1	3.4	1	23	634	656	634	656	0.99

Sequence Information

Coding Sequence: ATGGAGGAGCGATTAACGTCCTATGGGGGGGTTGGTTGCGTGGCGCGGGGCGTAGTTGGTGGTGTAGGGGCTGTGCCCGGTTCCCATGAAGCCTCGCAGCACAGCGGCACCGTCGACGAAGACAAAGAGGACGAAGAGGAAGGCGAGACTAGATGCGCCGTCTGCGACAAACCGTTCCAAGACATCGAGCTattGGACAATCACCTGGTAACCTGTCATAAATACCCAGCCGAACAGCACCGCTGCGACAGCTGTCCGCGATCCTACGCCTGGCGACCGCTGTTGGTACGTCACCGTGCGATCGTTCACGGCGATCTACGAAACTACGCCTGCGAGAACTGTCCGAAGTTGGACAAACCGCAGGTCTTTACCGATCCGTCGAATCTTCAACGCCACATCAGGACCCATCACGTGGGCGCCAGGAGTCACGCGTGCACCGAGTGCGGAAAGACATTTGCCACCAGCTCGGGCTTGAAGCAGCACACCCACATCCACAGCAGCGTGAAGCCGTTCCAGTGCGAGGTGTGCTTCAAGGCGTACACGCAGTTCTCGAATCTATGCCGGCACAAGCGTATGCACGCGGACTGCCGTATGCAGATTAAGTGCGTCAAATGCGGCCAGTCTTTCAGCACGGTCACCTCGCTGTCCAAGCATAAACGATTCTGCGACTCGACACCGCCAACTGGTCCACCTGGCGCCATGCCTCAGTTACCAACCTCGGCGCCCAGCCCTTTCCTCGTCTATCCCAGACCACCCGTCAGTCTTCCCGGTGGCTTGCCCTTCTATCCTCCAAGTTTGATGGGACCCTATCCCGGAATATTTCCGAACGCTCCCAACTTCTTGAATACGCCCCTTCTATTCCCGCCGAAGATCGAGGAAGCCGAGAAGAGGAGCGACAGTCCGAAAAAGGAACGCTTCACGCCGCCGAGAGTGCTGCCGCAGCACAGCAAAGTCTCTCCATCCACCGCAGAAGAGGCTACATCTTCCTTCAGACCATCCCCCGCTAGACCGCCGGTTCAGCCCACTCCAGAGAGCGACGATGATCcctcgaagaaacgaaaacgctGCAGAAACACCGAGAAGGAGTCCGAAGCTGACCACGCTTCGGCGTCCACGAACGACGAAACCACGGATCAGCCGCTGGATCTGAGAGTTCaaacgaagaaacagaagGCCACTCCGAATAACGCTGCTGAAAGGAGGAGCCGTAGTCATTCGCCGACTCCAGCACCCATGGACGCATCTCCGCCTCCCCCGGAGCCTCCGAAACCGGAAGAGGAACAATCTTTGCAGATGAAAGTCGAGTCCAAGGATGTACCCAGCAGTCCACATTTGCGAACAACTCTGCCTACCGAACAGCCTCCAACAAACACTCCGCCGCACATGGCCTACCCCAGACCGATTCATCCCAGCTTTCTGGAGGCTATGTATCGCGGACCAGCCGGCGGCTTTCCCGGTTTTCCCGGCGGCCCGCCGCCACCTGCTGGAGTCACAGCTGATTCCAGGTTACTACCGCCGCTGCCACCGTTCGGACCACCGCGTGGTCTTCCTTTTTTAGGGACCCTCATGAACGGACTCAGCGGCGCTAGGCCAGGAGCCGGAGGATTCGATCTGCTCGGCAGACCGCCGCTGGGGCCGTTCCCCGGCGTGAAACCGTTTCAAGAAGCGGTAATGGCTTCGCATCATCACCACCATCATCACCATGCCCACGGCAAGATGAAAGATCGGTACTCCTGCAAATTCTGCGGAAAAGTGTTTCCAAGATCCGCGAATCTGACTAGACACTTGCGCACCCACACCGGAGAGCAACCGTACAAGTGCAAATACTGCGAGAGGTCGTTCAGCATCTCCAGCAATCTTCAGCGGCACGTGAGGAACATTCACGATAAGCAGAGGCCGTTCAAGTGTCCCCTGTGCGAGAGGTGTTTCGGACAGCAGACGAACCTGGACAGACACCTGAAGAAGCACGAGGCCGACGACGGGAGCGGAGTCGTTTCTGTGGCAGACTCCCCGGGCAGTAGCAACGAGAATGAACGAGAAGATACGTATTTCGATGAGATCAGATCGTTCATGGGAAAGGTGACATACGGCGGTGAAGCTGGATACGGGTTGCCGCCGCATCCAGCTTATTTGCCCAGTCGACTTCACGAGATGAACGAGTCCAAGATGGAGACCGAGTACGACGAAGATGAAGACAGCGAGGAGGGTGTCTCGCCTCTGGACGAAGCTGATGCCCTGTCGCCGGTCGAGGGCAAGGAATCGACGCCTCCGCCACAGTACGACCTGAAGCTTCGAGAGAAGCAGGAACTCCTCAACAATAACACGGCGGAGCCTGTCATCGAGATCTCCACATAG
Protein Sequence: MEERLTSYGGVGCVARGVVGGVGAVPGSHEASQHSGTVDEDKEDEEEGETRCAVCDKPFQDIELLDNHLVTCHKYPAEQHRCDSCPRSYAWRPLLVRHRAIVHGDLRNYACENCPKLDKPQVFTDPSNLQRHIRTHHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCVKCGQSFSTVTSLSKHKRFCDSTPPTGPPGAMPQLPTSAPSPFLVYPRPPVSLPGGLPFYPPSLMGPYPGIFPNAPNFLNTPLLFPPKIEEAEKRSDSPKKERFTPPRVLPQHSKVSPSTAEEATSSFRPSPARPPVQPTPESDDDPSKKRKRCRNTEKESEADHASASTNDETTDQPLDLRVQTKKQKATPNNAAERRSRSHSPTPAPMDASPPPPEPPKPEEEQSLQMKVESKDVPSSPHLRTTLPTEQPPTNTPPHMAYPRPIHPSFLEAMYRGPAGGFPGFPGGPPPPAGVTADSRLLPPLPPFGPPRGLPFLGTLMNGLSGARPGAGGFDLLGRPPLGPFPGVKPFQEAVMASHHHHHHHHAHGKMKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHDKQRPFKCPLCERCFGQQTNLDRHLKKHEADDGSGVVSVADSPGSSNENEREDTYFDEIRSFMGKVTYGGEAGYGLPPHPAYLPSRLHEMNESKMETEYDEDEDSEEGVSPLDEADALSPVEGKESTPPPQYDLKLREKQELLNNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00024776;
90% Identity: iTF_01070550;
80% Identity: -