Basic Information

Insect: Nomada hirtipes
Gene Symbol: RREB1
Assembly: GCA_951802735.1
Location: OX637923.1:10772572-10784068[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0059 0.61 11.1 0.1 1 23 43 65 43 65 0.96

2 16 0.00025 0.026 15.4 0.0 1 23 79 101 79 101 0.97

3 16 1.2e-07 1.2e-05 25.9 1.1 1 23 107 130 107 130 0.98

4 16 0.012 1.2 10.1 0.1 1 23 224 248 224 248 0.95

5 16 0.14 15 6.7 2.9 2 23 254 276 253 276 0.94

6 16 1.7 1.8e+02 3.3 0.6 1 19 332 350 332 352 0.89

7 16 0.19 19 6.3 0.1 1 23 465 487 465 487 0.96

8 16 2.5e-05 0.0026 18.5 0.3 1 23 496 518 496 518 0.98

9 16 0.0012 0.12 13.3 2.8 1 23 524 547 524 547 0.97

10 16 0.00043 0.044 14.7 3.0 1 23 901 924 901 924 0.97

11 16 0.00061 0.063 14.2 0.1 3 23 1199 1219 1197 1219 0.97

12 16 0.54 56 4.9 6.0 1 23 1225 1248 1225 1248 0.97

13 16 0.0038 0.4 11.7 2.2 1 23 1284 1308 1284 1308 0.97

14 16 0.44 45 5.2 4.8 1 23 1392 1415 1392 1415 0.96

15 16 0.01 1.1 10.3 0.4 2 23 1464 1485 1463 1485 0.94

16 16 1.2 1.3e+02 3.8 8.2 1 23 1491 1513 1491 1513 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0059	0.61	11.1	0.1	1	23	43	65	43	65	0.96
2	16	0.00025	0.026	15.4	0.0	1	23	79	101	79	101	0.97
3	16	1.2e-07	1.2e-05	25.9	1.1	1	23	107	130	107	130	0.98
4	16	0.012	1.2	10.1	0.1	1	23	224	248	224	248	0.95
5	16	0.14	15	6.7	2.9	2	23	254	276	253	276	0.94
6	16	1.7	1.8e+02	3.3	0.6	1	19	332	350	332	352	0.89
7	16	0.19	19	6.3	0.1	1	23	465	487	465	487	0.96
8	16	2.5e-05	0.0026	18.5	0.3	1	23	496	518	496	518	0.98
9	16	0.0012	0.12	13.3	2.8	1	23	524	547	524	547	0.97
10	16	0.00043	0.044	14.7	3.0	1	23	901	924	901	924	0.97
11	16	0.00061	0.063	14.2	0.1	3	23	1199	1219	1197	1219	0.97
12	16	0.54	56	4.9	6.0	1	23	1225	1248	1225	1248	0.97
13	16	0.0038	0.4	11.7	2.2	1	23	1284	1308	1284	1308	0.97
14	16	0.44	45	5.2	4.8	1	23	1392	1415	1392	1415	0.96
15	16	0.01	1.1	10.3	0.4	2	23	1464	1485	1463	1485	0.94
16	16	1.2	1.3e+02	3.8	8.2	1	23	1491	1513	1491	1513	0.98

Sequence Information

Coding Sequence: ATGCCCATTCTAAATAGTACCATGCACGATCCAGTTACTGTCAAGAACAGCCAAGAGCAGGAGACCGAGTCGCAAGCCGATGCTGATTCCTCGCCGTCCAGCATCGAAGTCGTCCCGGAATGTGCACACCCCTGCCCCGCCTGCCCAATCGTCCTAAACAGCTCCAGGGAATTAACGAACCACCTACGCGGCCATAATTCGCCCCGCAGCACAGATTGCAGCGGCGAGGACGATTACATCTGCGGCGTGTGCAACAAAGTGCTGAGTTCGGCCAGTTCTCTAGACAGGCACGTTTTAGTGCACTCGGGGGAACGTCCATTCAAGTGCAAATACTGCGACATGGCGTTCACGACAAACGGAAACATGAACAGGCACATCAGAACGGCCCACAGGAGCGCGTCGCCGCACAGCTGCACGGATTCCGAAGGGAGCAGCGACTCCGAGAAACAATCGCAGAGGCGACACTTAGAGGAGTACAACAACAACGAGATCACAAAGAGGAACTCCCCGGATTTCATCGAGAGGCAAGACGAGCACATGCCCAGCCCGTCCGGCAAACGGAAGTGCCCGGACTACTCCAGCGACAACGAACATCAAAAGAGGCACAAGATCTTGCTGAGCAACTCGAGGACGGAAATGAAATTGCAGCCGGACGACAGCCAGGACGTCTATATATGCCCGGTCTGCGGCAGGCAGGATTTTGCCACCAGCGCCCTCCTGGAGGCGCACTTGGAGCGCTGCCATCCGGAGTTCCCCACGAAATGCGACTCCTGCAATTTGTCGTTCAAGAACCACAGGGTGCTGAATCTGCACCGATTCATGATACACTTTGCTGAACATTCTATAGGAAGTCCGGCGAGGAATCTTCGGAATTCCATTGTGGGCTTCAACGACCTGACCTTCGTCGACTTCTCCTCGGACAAATTCCCGGCGATCGCCAGGGCGGTCTGCGAGCAATCCCTGCACAGACCGGCGTCTGGAGAGGTCGCGAAGTTTCAATGCTCGAAATGCCTCCGGGCGTTCCCTTGTAGATCGGCGTTGGACGCCCACGAAACGGACTGCGGGATGACGAATTCGCAGAGCAGAATCGCGGACGACAGTCAGTCCAGGAGGGACGACTTCTTCGCCCGGCTGGATCTCCAGAATAAAGCTGCCTTGACGGAAGCCAAAGAGGGGAAAGATTTGGCCGATATACAGAGTATCATATCGGTCACGTCTGGACCTATCCTACAAAATTTCCCGCGATCCGACTCCAGTACACCGGAGAGCAACAAGTTTAACCCCAGTACCAGTTCCTCCAGCTCCTCGGGCACGTTCTCCACCGAGTACCACGAGGAAGAAGCCCAGGACGCGTTCGCGGCGGAGTTCAGAAAGATGAAGCTGAAAGGCGAGTTCCCATGCAGACTCTGCTCGGCGATATTCCCCAATTTGAGAGCACTCAAGGGTCACAATAGGGCGCACATGGGCGTAGGACCTGGTATGCCATATCCTTGCAACATGTGCCCGTACACGAGCTCGGACAAGGCCACCCTGGTCAGGCATCTGAGGTCGCACAACGGCGACAGACCTTACGAGTGTTCCCTCTGTAATTACGCGTTCACGACCAAAGCGAACTGCGAGAGACACGTGAGGAACAGGCACGGGAAATTAACGAGGGAGGACATCAAGAGCGTCCTGATCTACCATCCGAACGAGGATTCCACGAACGAAAGCGTGGAGAGGACGTCCCCTAGAGTATCGAAGGACGATGTCAGGAAGAGCCTCATATTCCCGCAAGAACGTGACGATCTCCAGCATCAGGCGCAGATACATTACTCCTCTCCGGCGCACATGGACGGCCGCGGCGAGATCAGGATAATAGACGACGCCAAACTGAACAATTCGGTACTGTCCATGCCGGGCATGAATCATTTCGAGAAGATCAACGTGTTCTCGATGCCAAGCCAGTCGCTGGAGGTGCCGCAGCGAAGCGTGGACGAGAGGCCAGACACCAGGTCAGACTGCTCGAAGGCCGACGACGACGCGGAGTCCAGGTCGTCAGAAGCGAGTATATCTCTAGTCAACGATATCAACTCAGATTCGCACCAAAGAATGCAAGCTAGTCCGATGAATCTGAAGAAGAGGTCGAGTTTGTCTGACACCGCTGGCGAGGACGGTCCATTGGACCTGTCCATGGACGTGCTAGATCTCAGCAAGAAGTCCAAGGAAAGGGACGACGATCTTGGCGTGTCTGGATTGCATGAAAACGAGTTCGCGAGGAACCAGGAGCAGCTGTACAACGCGACCAGTCAGCTGTTATTGACGGAGGCGATACTAAAGGCCAGACACGGTATTGGAGCTGGGCTTTTGCCACCGTACATGTTCAACCCTCATGTATTCGGCCAGGACTACACTACGAAGGAAAGGTTGCAGAGAGAATTGGTCAGAGGTCTGCAATTGACCAGCGGAGGGACGTTGGTGGAGCCATCCATTGTCAACACCGGATTCCCAGCTTTCTGTCAAGGCAGAGACTTCAATTCGCAGGCTGTCGGCGAGCAGAGCGAATACGCCAAGCTGATCTCCTCTAAAATGGGAAATCAGGGCCACTCGAGTAGAGACAAGCCCGATAATCTACCGTCTTCGAACTCCGTGAAGATGGTGATTAAGAACGGTGTCCTGATGCCCAAGCAGAAGCAAAGACGGTACAGGACCGAGAGACCATTCACCTGCGAGCATTGCTCTGCAAGGTTCACGCTGAGAAGCAACATGGAAAGGCATATTAAACAGCAGCACCCACAGCACTGGAGCCAGCGGCCCAGAGGGGGCCATTCGACTAGAGGAAGACCGCCGTCCAGTCATCCGACGCTGCTGCAAAACCTTGGACAGTCTACGTCGCAGGTAAACCAGAACTATTCAAGTATCCTGCCGAAGGTCGATCAATCGCCAGCGAGCTCGGACTTGGCTAAGCATCCCATTTCGGACCAAGTCAAATACGCAATCTTGGCTCAACAGTTGAAGGCGAATAAAACGGAAGACAACGATTCAGAGGAAGAACTGGTCATCGACGAGGATCCGCAAGAGAAGGATAACCAGGAATCTCAGGAGCAGGAGAAGAGCCTGCTTAGAGGGCAACTGGAAGGCACTGAAACGGGAAAGGAAGTCACCGTAAAAGAAGAGGTGATGGAACCCATGAACTGTGACTCGCAGGAAGATGCTGTTGAACCATCGAACAATGAGGAAGGTGAAGACGAGGAGCCAAAGACTTCTGACACGGAGAAGCCCGCAGAAACGGAGAATTCTGACGCGGGCTCTAATCCAGTTCTGAAGACAGAGGCGGTCGAGGTGGAAACTGAGAAGGTAGAGGACGGAACGACAGATTTAGCAAGCGTGTCAGAATTGCTGGACAATGCCTCGCAGCAGTACCAACAATTTCAACCGCAATATCTGAGCGACGAGGAAGGGTTGGTCGCTTCTAACAGCGACTGCAATAATTCTGGCAGCGACGAGAAATCCGATTCGGTGAACTCGTTAAACTCAGTAAACGCCtcgtcgaagaaaaagaagaagaagaagaagaagaagagcgcGTATTCGATGGCGCCTAATCGCGTGATCTGTCCGTACTGCGAGCGACCATTCCCCTGGACGTCTTCGCTCAGAAGACACATCCTCACCCATACCGGACAGAAGCCTTACCAGTGTGTCCACTGTTCGCTGTTATTCACTACCAAATCGAATTGCGACAGACACCTGTTAAGGAAACATAAAGCCAACCCGAACAAGATGCGCAGGGTTAGGAATTCCTCCTCTCCGGATTCCCAAGCAGTCATCAACAACTCATTCTCCATGAGAAATGTTCCCGAGAGGCCGTACAAATGTAACCAGTGCCCAAGTTCGACCTTTTCTACTTTGGGCAATCTGAAAAAGCATCGTTCCACTAAACATGCCAGGAAAGTTACATCGAGGCCGGACAGTCCATCCAGCGAACCTCAGAACAGCCCCCAGGAATGTTCTAAACAGAATAACGAACAGAGCGATTACGACAGCCAATCCTCCAGCGTCTCTGAAGGGACAGAAGTTTCCTCGATGGTAGAAATTGCTAAGACCCCAAATAATACCTCGTCGTCCACCAATGATACACCTAGATCGAGGAGACCATCCCCTAGATCTTCCCCTGGGCCCAGCGATGTGCCTTTCAAGTGTCACCTGTGCGACTGCGGCTTCGCGGACAGACAGGACTGCCTGGAACACATCAAAGTTAATCACAAGAGATCCTACGAAATGTTGGTTGCAAAGGGAGCCCTAGACATGGACATTGACGCTGTGGAGGACCAACAACCCCCGCCACAACAGACCAGCGATGGAGAAGAGAAGAGGGGACGGTTTCCGGATTACAGCAACAGAAAGGTGGTCTGCGCATTCTGTATGAGGCGATTCTGGTCCGCGGAGGATCTCCGACGTCACATGAGGACCCATACCGGGGAGAGGCCGTTCTCATGCGACATTTGCTGCCGGAGGTTTACTCTGAAGCACAGTATGCTGCGGCACAGAAAGAAGCACGAGTCGATCGACTCAACGATGTATGTTGGCACCAGCGGGGACGAGGAGAATTCTCCTACACAGCCATCCAGCATCGCTCTACGTAACCAGCAACAACCGCCTGTCCACGCGGCGAACAACAATGGAAACCCCCGGCTTCAAGACAGAATCTCTTTACCGACTGTCGCTCCGGTCGTAACCAGTGATGCAGTGTCTAGTGGATTAATACGATTTAATCCGTACGAAAAGTTGACCACTCTGTCAGGGAAACTGGCTAGTATTCCACAAAATGTGAATTCAGAAACGAACGAGAGCGCGGATAACGATTTGATTTCTAACCTCCTAGGAATTAGAGATAAGAACTTTATTGACCGCGTACTACAGGCGTCCGCTGATGATGCTGCCAAACTATTGGGGGTGAAGCACAGCCATGAATGA
Protein Sequence: MPILNSTMHDPVTVKNSQEQETESQADADSSPSSIEVVPECAHPCPACPIVLNSSRELTNHLRGHNSPRSTDCSGEDDYICGVCNKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHIRTAHRSASPHSCTDSEGSSDSEKQSQRRHLEEYNNNEITKRNSPDFIERQDEHMPSPSGKRKCPDYSSDNEHQKRHKILLSNSRTEMKLQPDDSQDVYICPVCGRQDFATSALLEAHLERCHPEFPTKCDSCNLSFKNHRVLNLHRFMIHFAEHSIGSPARNLRNSIVGFNDLTFVDFSSDKFPAIARAVCEQSLHRPASGEVAKFQCSKCLRAFPCRSALDAHETDCGMTNSQSRIADDSQSRRDDFFARLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQNFPRSDSSTPESNKFNPSTSSSSSSGTFSTEYHEEEAQDAFAAEFRKMKLKGEFPCRLCSAIFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSSDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNESVERTSPRVSKDDVRKSLIFPQERDDLQHQAQIHYSSPAHMDGRGEIRIIDDAKLNNSVLSMPGMNHFEKINVFSMPSQSLEVPQRSVDERPDTRSDCSKADDDAESRSSEASISLVNDINSDSHQRMQASPMNLKKRSSLSDTAGEDGPLDLSMDVLDLSKKSKERDDDLGVSGLHENEFARNQEQLYNATSQLLLTEAILKARHGIGAGLLPPYMFNPHVFGQDYTTKERLQRELVRGLQLTSGGTLVEPSIVNTGFPAFCQGRDFNSQAVGEQSEYAKLISSKMGNQGHSSRDKPDNLPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPSSHPTLLQNLGQSTSQVNQNYSSILPKVDQSPASSDLAKHPISDQVKYAILAQQLKANKTEDNDSEEELVIDEDPQEKDNQESQEQEKSLLRGQLEGTETGKEVTVKEEVMEPMNCDSQEDAVEPSNNEEGEDEEPKTSDTEKPAETENSDAGSNPVLKTEAVEVETEKVEDGTTDLASVSELLDNASQQYQQFQPQYLSDEEGLVASNSDCNNSGSDEKSDSVNSLNSVNASSKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCVHCSLLFTTKSNCDRHLLRKHKANPNKMRRVRNSSSPDSQAVINNSFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHARKVTSRPDSPSSEPQNSPQECSKQNNEQSDYDSQSSSVSEGTEVSSMVEIAKTPNNTSSSTNDTPRSRRPSPRSSPGPSDVPFKCHLCDCGFADRQDCLEHIKVNHKRSYEMLVAKGALDMDIDAVEDQQPPPQQTSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSTMYVGTSGDEENSPTQPSSIALRNQQQPPVHAANNNGNPRLQDRISLPTVAPVVTSDAVSSGLIRFNPYEKLTTLSGKLASIPQNVNSETNESADNDLISNLLGIRDKNFIDRVLQASADDAAKLLGVKHSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00625690;
90% Identity: iTF_01067122;
80% Identity: -