Nhir004670.1
Basic Information
- Insect
- Nomada hirtipes
- Gene Symbol
- JARID2
- Assembly
- GCA_951802735.1
- Location
- OX637917.1:23947979-23954702[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2 1e+04 -2.6 0.1 56 83 152 177 139 178 0.68 2 2 9.4e-23 2.3e-19 70.0 0.0 6 89 1371 1452 1367 1452 0.94
Sequence Information
- Coding Sequence
- ATGGTGTTAAGTCGTAATgataaaaggaaacgaaaagaagGGGATTTAGTGGATCTCATGGAACCTCTTTCAGAGTCCCCAAAGAGGACTAAAGTACACGCGCAAAGAAAGTTTGCACAGGGAGCTACAACAGTTTTCAATCCTTCTCATACTCCCATtaaagataaagaaaaaacTAAGCCAGCAGTtataacagaattaattacgCACAAGAGGCCAAATACAGAAGATTTTCTAACATTTCTGTGCTTCAGAgGAACATCGATTTTGCCTCCAAGCTTAAACTTCTTCAACGTTGGAAACAAGAAGGAAAAGCTAGATTCGAAACGAACCCGTACAGATAATAAGGCTTCCTTTTCAACTAGTACATCCGCCGAAAATCAAAAATCAGATACAAATCAGAAAACGGTGGCAAAAGTGAAGTCTACAGTAGCTGATAAAAAGAAAGTTCCAAGCGATGTAGCAAAAAATATTACTACATTTAAAAGCACAACATCCACTGTGCAGGcgcttaaaaaaaagtatcaaGAACAGCGTCTTGCTAAACAAaggttaaaaaataaatttaagacATCATGCGTTATGAGAACAAGGTCTTGTACGGAACGAACAATACTAAAGCCGGCAAATAAATTGGCGAGCAGGAAATTTCTTCCAAGAATTGAAACTAAAAGGCTTGGCTTACGAAGTAGCGTGCTGACGGATAAAACAAAGAAAGCTTCTCTGAAGGTTAAATCTGTGCCACCTAAACCAAAGAAAAAGGTTACTGCGAAACAGAAAGGCAGTGACTCATCGAATTCAGATTCTACATCCGaagaggacgaagaagaagaagaagaagaaggagaagaagaagaagaagaagaagaagaagaagatggtCCTTCTGATAAGTCAGTGCCACAGATAAAACGTACAATGCAGAAGAAtgcacaaaaaaatatatgtacaagaAGTAAATCTGAAATGAGAAGGATCACACGTTCCCATAGTGGTACGGTATCTCCGAAAAATCTTTGCAGACGGCCTACCAGGAAAACTAAAGAAGCAGCTGCGGTATACATGGAAATTCTTGGACGAAAACTTGTAAGTCCTGATTTAGAACACGATGACAATGTTTCCATGGACAGTTTTCCAGAATTGCCAAACATGCGTAAAAATAGTCACGCAGAGAACGAAGTTAAATCTAAAGTTAAACAGACCGTTACGAAAACAATTAGCAAAAATAAAGATAGCAAAGTTACTTCCGTTCATAGTATCTCAAATAAACGGTTAGATAAAACGAAAACCAATAAGATAGCTTTTAAAGCTAAAAGGCTAGTAAGAGTTCAAAAGTACTGTGAAATTGACAGCGACGAAGAGTCGGTTAGTTCTAATGAAACTAATAACACAAGACCTGTAACAAGAAGGAGTCtcggaaaattaaataaaccgGCAAGCCGACATCTCAGATCGTCTActaaaaataatgttacacGAATGGAGATTCAAGCTACCGTAAATGCGAAATCAAAATCCCAAGTTCAAGGTAAcgcaaaatttaataaagaaaaatttgtaatgaaacGTAAGCGCGAGCAAAATTCTAATAAATCGTTGCCAGAGAAAGGTAGTGGATTGAAACAAAAGGAAGCGAAAAATACTGCTGAGCAAATTACGGATTCTGATGAAGAAACTTTGGGGATGTTACTCACTAAGCTGAAGCGAAAGAAGGGTGACGATAGCGTGAAAGAAGAGATTACCaccaaaaataataatcccGATGGTGGAGGCAAAGAAGAACAGCCTGTAACTGAAATTTCCGCGAAGGCGGATTTTTCGAAGATATCGGACGATGAAGGATCATTTCGGGGATTTGCAAACAAAGCAATATCCAAAGTATTAAATTCTTGTCAAACACAAGTTAATGCCAATCTTCTTGATACAGAAAAGACAGCTGTTAAATTGGAAACAGTCGAGGTGAAAGGTAGACAACAATCAGATGCGTCGAATAAACAGCTAGATAAAGGTTTTACGTGCAATAAATCCACATTAAATGAAGTTTCTTCTCCGGCAATAAGTGTGCCGGATGAAAAAATTCCGAATGAAAAAGCAGAATTACCTAGTAAGGTGGAGAgccaaatattaatagaaCGTACTGAAAAGGAATGCTATCACAAAACTGAAAGTTCCTCCACGAACATTATTGACATGACTTTATCAACATTGCACGTAAGGAAAGAAAAGGTAAATATGTCAACtgaacaaattgaaaaatggTTGAACGAGAGTTCATTTGCTAAAGAAGAAAGTAAGTTAGAAATGGAGAATGTATCTACTTTCAAATATGACGTTTGTGAGAAAAAGAGCGATGTATCGCATTTATCAATCTCGACGAAAATTCAGCACTTGGTAAGACCAGTTAATGTCACACTTTCCAAATTAGCGGAGAAGGCCAATGTGAAAGATCGCCTGAATATGCACAACAAATATACGCCGATTATAATTGGGAATTTACACTCTGATATGAAGCAACAGAATGAATTGACTAATGCCAATGTGTACAGTGCAGATATGaaagatattattaaaaaccgTAATATAAAAGCCATTAAAGACTCGTGCTGTGGGGAAGAAAACGATAATGCGCTAAAATCTGATCAAATTTCTGTAGATGGGTCCACTGAAAAGAAATTATCATCTGAAAAGAAACCTATATTTCAACAAAGGAAACCATTTCTGCCAAAGGTCAAAGAACGCAAAACAGTAACTCCAAATGCAAATGCATTCTCCCCAGAAAATGAAAGTAGCGTTTATGCATTTGAAAGCGACACAGAAGTCCCAGTTAGTACACCTTTTAGGCGAAAAGTTCGCGAAAATAGTAGATCACATGTAACAGTTCACTCATGCGAAATCGAGGCAAGCAAAATCGAAAGCAATACAAACAAATCTCAGTGCGACGCAGATAAAAGTATCGAAAATATAATCAAGGATGATCGTGAGGGGGCGGAAACTAATAGAAATGACAACAATGTTTCtccaaaaaatgaaaacgataTAACAGAAACAACAAGTACATCTAATACTATGTTAAATGTAAATAAGTTTGAATTACCAAAAAATTTTGCAACGTTAGCTAATATACAGGTTTTACCACTGGACAAATTATCAACAACTTGGAGTAATGTAAACTGTAGCGCGTCAATAGCTGTACAAGTAAATCTCGACGATAATGCACAAACGCATGAAAAGATAGCGGAAGGCGATGCAAACCAGCACAAGAGTACAGAAATATCTACTCAGACTGACAGTAATAATGAGAACGACGATGAAAATGATGGACAACTATTTTACATTCCTTTGCAAGCAGTTACACGAAATGGGCCAAACTTAGTTCAAGGACAACAATTGATTCAGGGTGTGGCTGTGAAGCTTGGCACAGAAGGGCCGAATGGACCTAATCAAAAGGTTCTTTTAAGAGCAAAGTTGGTTACTAAACCACCATCGTCAATCGCACGTTGTCCGCCCATAGGAACAGTTCAACCTACAACTCGGGCTCCACCCAACTCTGCCTCTGTTGTAACAACCGATAATGTGGTACCGTCAACTTCTTCCGTTCCAGCGCCAATCGTATCTGGATCTAATCATGAACCTCGACAGCCCGCGCCATGTAAGACTGAAACCATAGGACAAACGACAACTAGACAAAGTACAGGAACTACATTAAACATGGGAACAGAAAAAATGACGAGATCTCCGAAAACCTCTAGAGAAAGGAAAACTTCCATTGACTCTAATAAAAATGGCAAAAGATGTCAAGTTAAAtccaaacaaaaattatccGAGGTTTACTCTCCAATTAATAACGTATCATTTCCAAGTGCGAAACATGAAAACAAAGAGGCACGTTTAGTGGAGGCACCAACATTTCACCCCAGCGAAAAAGATTTTCAGGATCCTCTGGAATACATAGATAAAATAAGACCAATTGCAGAGAAGTTTGGAATATGCAGAGTTGTACCACCACCTAATTTTAAAcCGGAATGTAAAGTGTCGGATGATATGCGCTTTACTGCTTATAATCAATATGTACATCGTATGCTTCATAGATGGGGTCCCAATGTGAAAGAAATGATGgctataaagaaatatttagccACACAGAGTATAACATTGACTCATCCACCTTGgatTGGCGGAATGGAAGTTGATTTACCCCATTTGTATCAAACAGTTCAAAGTTTAGGTGGACTAAAAGAAgttattgaaaaaaagaaatggcaGAAAGTGGCTGACGGCATGAAGATACCAAAATCAGCCCAAGATCGCGTCACTAAATTAgatgatatttattgcaaatactTGTTACCGTATGACACTTTATCTCCCGAGGAGAGAGGTAAACTGTTTGACGAAGTTGAGTCTGAATGGATAAGAAAAGAGAGTAGAGTTTTGCAAAGGCAAAGTGCATCCGTAAGTGAAAATGAGGAAGATGAAGATGACGATAGCTCTGACGAAATTGAGGAATGCATTGTAAAAGGTAGAAATATGCCATTAAATGCATTTTATCGTATTGCGCGAAACACGCAACGTATGTGGTTCGGTGAAAATCAGCGGTCTGGGAATGAAGCTGATGGCGCGTCTGCTGACGAGGTTGAAAGTGCATTTTGGAAGCACGTCGCGGAAAGAAAACGACATGTTTGCGTGCATGCTGCGAGCATCGATTCAAGTGGACGAGGTTTTGGATTTTCTGTAGCAAAAAATAGTCCCTTTGCAAGGCATCCGTGGAATCTTAAAGTACTCACTAATAATGCTGGTTCAGTGTTAAGAGCTTTAGGTCCCATCATGGGTGTGACAGTACCAACGCTTCACGTGGGCATGCTGTTTAGCGCATGTTGTTGGTATCGCGATCCCCATGGTCTTCCTTGGATAGAGTACTTACATACTGGTGCTAAAAAGATTTGGTATGGTATACCAGACGAACATAACAATAACTTTAGAGAGGCTCTGTCAAACATGGTACCAcgatattgtaaaaataagaCTATATGGCTACCATCAGACACAGCGATGGTTCCGCCAGAACTGTTGGTTAGCAATGGGGTATCATTATGTCATACTGTTCAAGAACCAGGGCAGTTTATAGTAGTATTTCCTAAAGCATTCACATCGAGCATATGCACTGGATATGTAGTATCCGAAAGCGTCTACTTTGCACAGCCATCCTGGTTAGAAACTGCCGAACAAGTATTTAAAGATATACAGGATAGCTGTGAACCATCGATGTTTTCGTTCGaaagattattatttaatattatcaatGATTCTAGATCTCATATAGAAGTATTGAAACAgATTATGCcgagtgtaattaaaattcgtgAAAACGAAATAAGTTATCGCGAGCAATTGGAGGCAGTGGGTCTTACAAGCACAGAAAGATTACCTTTGCCGGATAGcgggaaacgaaagaaaggcaAGAAAGTAAAAGAGGATGACGGCGATTTCGAATGTGAAGCCTGCAGAGCTAATTTGTTCGTTTCATTGGTCAGCAATTCACAGGATGATAGTGTTTACTGTTTACCACAtgcgttacaattatttaataaaaaaaggcaAGCTTTAAAGCATTGTACTCTAATGTATACGTACAACGagGACGAGCTAAATGACTTGCTCCATAAGTTAGAAGATAAAATTGAAGCCAAATCTAAGAAAACTAATCAAATCAAACAAcctaaataa
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGATTVFNPSHTPIKDKEKTKPAVITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGNKKEKLDSKRTRTDNKASFSTSTSAENQKSDTNQKTVAKVKSTVADKKKVPSDVAKNITTFKSTTSTVQALKKKYQEQRLAKQRLKNKFKTSCVMRTRSCTERTILKPANKLASRKFLPRIETKRLGLRSSVLTDKTKKASLKVKSVPPKPKKKVTAKQKGSDSSNSDSTSEEDEEEEEEEGEEEEEEEEEEDGPSDKSVPQIKRTMQKNAQKNICTRSKSEMRRITRSHSGTVSPKNLCRRPTRKTKEAAAVYMEILGRKLVSPDLEHDDNVSMDSFPELPNMRKNSHAENEVKSKVKQTVTKTISKNKDSKVTSVHSISNKRLDKTKTNKIAFKAKRLVRVQKYCEIDSDEESVSSNETNNTRPVTRRSLGKLNKPASRHLRSSTKNNVTRMEIQATVNAKSKSQVQGNAKFNKEKFVMKRKREQNSNKSLPEKGSGLKQKEAKNTAEQITDSDEETLGMLLTKLKRKKGDDSVKEEITTKNNNPDGGGKEEQPVTEISAKADFSKISDDEGSFRGFANKAISKVLNSCQTQVNANLLDTEKTAVKLETVEVKGRQQSDASNKQLDKGFTCNKSTLNEVSSPAISVPDEKIPNEKAELPSKVESQILIERTEKECYHKTESSSTNIIDMTLSTLHVRKEKVNMSTEQIEKWLNESSFAKEESKLEMENVSTFKYDVCEKKSDVSHLSISTKIQHLVRPVNVTLSKLAEKANVKDRLNMHNKYTPIIIGNLHSDMKQQNELTNANVYSADMKDIIKNRNIKAIKDSCCGEENDNALKSDQISVDGSTEKKLSSEKKPIFQQRKPFLPKVKERKTVTPNANAFSPENESSVYAFESDTEVPVSTPFRRKVRENSRSHVTVHSCEIEASKIESNTNKSQCDADKSIENIIKDDREGAETNRNDNNVSPKNENDITETTSTSNTMLNVNKFELPKNFATLANIQVLPLDKLSTTWSNVNCSASIAVQVNLDDNAQTHEKIAEGDANQHKSTEISTQTDSNNENDDENDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQKVLLRAKLVTKPPSSIARCPPIGTVQPTTRAPPNSASVVTTDNVVPSTSSVPAPIVSGSNHEPRQPAPCKTETIGQTTTRQSTGTTLNMGTEKMTRSPKTSRERKTSIDSNKNGKRCQVKSKQKLSEVYSPINNVSFPSAKHENKEARLVEAPTFHPSEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVESEWIRKESRVLQRQSASVSENEEDEDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGNEADGASADEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPIMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSNMVPRYCKNKTIWLPSDTAMVPPELLVSNGVSLCHTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSMFSFERLLFNIINDSRSHIEVLKQIMPSVIKIRENEISYREQLEAVGLTSTERLPLPDSGKRKKGKKVKEDDGDFECEACRANLFVSLVSNSQDDSVYCLPHALQLFNKKRQALKHCTLMYTYNEDELNDLLHKLEDKIEAKSKKTNQIKQPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01424161;
- 90% Identity
- iTF_01066030;
- 80% Identity
- -