Basic Information

Insect: Nomada fucata
Gene Symbol: -
Assembly: GCA_948146005.1
Location: OX411281.1:683695-685960[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2.9e-05 0.0019 18.2 0.5 1 23 321 343 321 343 0.99

2 7 6.3e-05 0.0042 17.1 1.3 1 23 349 371 349 371 0.96

3 7 1.4e-05 0.00096 19.2 3.0 1 20 377 396 377 399 0.93

4 7 0.00029 0.019 15.1 5.3 1 23 405 427 405 427 0.98

5 7 0.00027 0.018 15.2 4.8 1 23 433 455 433 455 0.99

6 7 3.6e-07 2.4e-05 24.2 0.4 1 23 461 483 461 483 0.98

7 7 6.8e-05 0.0045 17.0 1.5 1 23 498 520 498 520 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2.9e-05	0.0019	18.2	0.5	1	23	321	343	321	343	0.99
2	7	6.3e-05	0.0042	17.1	1.3	1	23	349	371	349	371	0.96
3	7	1.4e-05	0.00096	19.2	3.0	1	20	377	396	377	399	0.93
4	7	0.00029	0.019	15.1	5.3	1	23	405	427	405	427	0.98
5	7	0.00027	0.018	15.2	4.8	1	23	433	455	433	455	0.99
6	7	3.6e-07	2.4e-05	24.2	0.4	1	23	461	483	461	483	0.98
7	7	6.8e-05	0.0045	17.0	1.5	1	23	498	520	498	520	0.98

Sequence Information

Coding Sequence: ATGATGCCGCTGTCAAATATATTTTGTCAGATATGTGATGCAAACATTGATCATTCATCCTGTATAAATATATTCGGTACAACTTTTCCTCGTCATGGGGAATTGTTGGTAAATTGCATATCAAAAGTACTTCGGGTGGCCACAAATGAATTGCAAGGCCCATACATTTGTGTACAATGTTACAACTTGTTTGAAATGTTAGAACAGGCGCAAAAAACAGTTTCAAACATACGTTGTGAAATTTCCAATGTGTATCGTGCCACAGAGAGACGGAAATATATCAAACAATCTATAAATAATGATATAAAACCTAATCAAACGTGCGTAACACTAGACCAAAGGAAATTGGTTGACAGTGGCGAAAGCTTGACGGACGGCTCAAATTTTGAAAGGTTTCAAGCAAAAGTAACAGTGCAACAGGAATATGCCCAAGATAATGTACTAAGTCATAATATAAATGTTCCAAGTATAGAGGATGCTATTCGTAATGAAATTACTTTAGAAACAAAGACGCAGATTAAGAAAAAAGCAACTGTCTTCAATGATGTAGATAATACAAACTCACTTGATTACAACAATACACATAAGAATGCAAAAGAAAATACAGCTTCAGAAAATGATATAATTTGCACATCGGTAGCATTAACTAACAATGCTAATGCATATAATATTAATAGTCCACCAGCAACGATACATGCATTGAAAATGCAAGTTGGAGAAGAAGAATTGATTTCACTGGTAGATTCTGAAACGAAACAAACAAAAAACTGCGTGAAAACAGATATCATATTTTCTGAGGATAGGTTGCAAGTAGAAAATACTAATTATAAATGGAACGAGATCAATGAAAATATGCAGGTGAAGGAAGACAGTGGGAACACAACAGTGGCAAACATTGATAAAATAAAAGTACCTGGAAGTCCAAATAAGATATTTAAGCAAGATTCAAAATCATTGAAATATTCTTGTCCCATTTGTAATAAAAGATGGAAAACAGCAGCAGAATTAAGAACACATACAAAAACCCATTCAACATTGAGACCGtacatgtgcgaaaaatgtggtcaagcgtataagcataagcatgcattggaaatacatgttggcatgcacaatggaataaatccattccagtgtaacttttgtcaaaagtgtttcacacaaaagggagcacttatgcgacacctgccaatgcatacaggtgaaacaccttatcaatgcgagttatgtggtaaaaggttcatacatcacacatcgtataatatgcatagattatcgcacagtgggaaaaagtcttataaatgtcatATGTGTGACCTGTCCCTACTttcaacgtcccatttaaaaagacatatgcgagttcatacaggcgagaaaccatacagttgtacagtgtgtggaaaacgttttgcagaacgttataatttgCTGGCGCATCAAAAAGTTCACGACACGCTGGACAATAAAGCAACAAGGGCAAAAGAAACACAATACCAATGTAACTACTGTAACTTGTTATTCGAGCAGAAGCAAACTCTGAATGAACATATAAAGCAACACGCTGATTCAAATAATGAATCTGATCTTAAAAAGTTAAATGGTATGATTATTCAAGTTGAAACTGAAACCTCTGATTTAGCGGAAAAAATTGATTCAGAACATAGTATACTGCAACAGACGTGGATTCAAATGAATCGTCCTAAATTGGATCTCATTGATAATCAAGCGAGGTTTGTACTTTTACAAAACCCTTTACCTGAAATCGATGAAAATTCTTTTGCAGTGGCATTTAGTGATCAGAAAGTATCCTTAGAAACTACAAACTACAATACGAACCTACAAGTAATTATAGAATCCTCGAGTGCAGCGCTATTAAGTAATAATCTTCCCTCTATTGATAAAATGCATATGTGA
Protein Sequence: MMPLSNIFCQICDANIDHSSCINIFGTTFPRHGELLVNCISKVLRVATNELQGPYICVQCYNLFEMLEQAQKTVSNIRCEISNVYRATERRKYIKQSINNDIKPNQTCVTLDQRKLVDSGESLTDGSNFERFQAKVTVQQEYAQDNVLSHNINVPSIEDAIRNEITLETKTQIKKKATVFNDVDNTNSLDYNNTHKNAKENTASENDIICTSVALTNNANAYNINSPPATIHALKMQVGEEELISLVDSETKQTKNCVKTDIIFSEDRLQVENTNYKWNEINENMQVKEDSGNTTVANIDKIKVPGSPNKIFKQDSKSLKYSCPICNKRWKTAAELRTHTKTHSTLRPYMCEKCGQAYKHKHALEIHVGMHNGINPFQCNFCQKCFTQKGALMRHLPMHTGETPYQCELCGKRFIHHTSYNMHRLSHSGKKSYKCHMCDLSLLSTSHLKRHMRVHTGEKPYSCTVCGKRFAERYNLLAHQKVHDTLDNKATRAKETQYQCNYCNLLFEQKQTLNEHIKQHADSNNESDLKKLNGMIIQVETETSDLAEKIDSEHSILQQTWIQMNRPKLDLIDNQARFVLLQNPLPEIDENSFAVAFSDQKVSLETTNYNTNLQVIIESSSAALLSNNLPSIDKMHM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01069186; iTF_01070595; iTF_01065777; iTF_01066481; iTF_01069883; iTF_01068510; iTF_01067817;
90% Identity: iTF_01067817;
80% Identity: -