Basic Information

Insect: Nomada fabriciana
Gene Symbol: -
Assembly: GCA_907165295.1
Location: OU015692.1:440714-442958[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2.3e-05 0.0023 18.4 0.5 1 23 316 338 316 338 0.99

2 7 6e-05 0.0058 17.1 1.3 1 23 344 366 344 366 0.96

3 7 1.4e-05 0.0013 19.2 3.0 1 20 372 391 372 394 0.93

4 7 0.00027 0.026 15.1 5.3 1 23 400 422 400 422 0.98

5 7 0.00025 0.024 15.2 4.8 1 23 428 450 428 450 0.99

6 7 3.4e-07 3.3e-05 24.2 0.4 1 23 456 478 456 478 0.98

7 7 6.5e-05 0.0062 17.1 1.5 1 23 493 515 493 515 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2.3e-05	0.0023	18.4	0.5	1	23	316	338	316	338	0.99
2	7	6e-05	0.0058	17.1	1.3	1	23	344	366	344	366	0.96
3	7	1.4e-05	0.0013	19.2	3.0	1	20	372	391	372	394	0.93
4	7	0.00027	0.026	15.1	5.3	1	23	400	422	400	422	0.98
5	7	0.00025	0.024	15.2	4.8	1	23	428	450	428	450	0.99
6	7	3.4e-07	3.3e-05	24.2	0.4	1	23	456	478	456	478	0.98
7	7	6.5e-05	0.0062	17.1	1.5	1	23	493	515	493	515	0.98

Sequence Information

Coding Sequence: ATGATGCCGCTGTCAAATATATTTTGTCAGATATGTGATGCAAGTATTGATCATTCATCCTGTATAAATATATTCGGAACAACTTTTCCTCGTCATGGGGAATTGTTGGTAAATTGCATATCGAAAGTACTTCGGGTGGCTACAAATGAATTGCAAGGCCCATACATTTGTTTACAATGTTACAACTTGTTCGAAATGTTAGAACAGGCGCAAAAAACAGTTTCAAACATACATTGTGAAATTTCCAATGTGTATCGTGCCACAGAGAGAAGGAAATGCATCAAACAATCTATAAATAATGATATAAAACCAAATCAAGCGTGCGTAACACTAAGGAAGAAGAAATTGATTGATGACGGCGAAAGCTTGAAAGATGCTTCAAGTATTGAAACGTTTCAAGCAGAAGTAACAGTGCAACAGGAATATACCCAAGATAATATACTAAGTCATAATATAAATGTTCCAAGTATAGAGGATGCCATTAGTAATGAAATTGTTTTAGAAACAAAGGAACAGATTAAGAAAAAAGAAACTGTCTTCAATAATGTAGAAAATACAAAATCACTTGAGTACAACGACACGCGTAAGAATGCGAAAGAAAATGATATAATGTGCGCATCGGTGGCATTAACTAATAATGCCAATGCATATAATATTAATACTCCACCAGCAACGGTACATGCATTAAAAATGCAAATTGGAGAAGAAAAATTGATTTCACTGGTAGATTCTGAAAAGAATCAGTCGAAAAACTGCATAAAAACGGATATCATATTTTCTGAGAATAGGTTGCAGGTCGAAAAAATTAATTATAAATGGAAAGAGATTGATGAAAATATGCAGGTGATGGACGACAGTGGGAACACTACAGTGGCAAACATTGATAAAATAAAAGTACCTGCAAGCCCAGATAAGATATTTAAGCAAGATTCAAAATCATTGAAATATTCTTGTCCCACTTGTAATAAAAGATGGAAGACTGCAGCTGAATTGAGGACACATATAAAAACCCATTCAACATTGAGACCATACATGTGCGAAAAATGTGGTCAAGCGTATAAGCATAAGCATGCATTGGAAATACACGTTGGCATGCACAATGGAATAAATCCGTTCCAGTGTAATTTTTGTCAAAAGTGTTTCACACAAAAGGGAGCACTTATGCGACACCTGCCAATGCACACGGGTGAAACACCTTATCAATGCGAGTTATGTGGTAAAAGGTTCATACATCACACATCGTATAATATGCACAGATTATCACACAGTGGGAAAAAGTCTTATAAATGTCATATGTGTGACCTGTCCCTACTTTCAACGTCCCATTTAAAAAGACATATGCGAGTTCATACAGGCGAGAAACCATACAGTTGTACAGTGTGTGGAAAACGTTTTGCTGAACGTTATAATTTGCTGGCGCATCAAAAAGTTCACGACGCGTTTGATAATAAAGCAACAAAGGCAAAAGAAACACAATACCAATGTAACTACTGCAACTTGTTATTCGAGCAGAAGCAAACTCTGAATGAACATATAAAGCAACACGCTGATCCAAATAATGAATCTGATCTTGAAAAGTCAAATGGTATGATTATTCAAGTTGAAACTGAAGCCTGTGATTTAGCAGAAAAAAATGATTCAGAACATAGTAAATTGCAACAGACGTGGATTCAAATGAATCATCCTAAATTGGATCTCATTGATAATCAAGCGCGGTTTGTACTTTTACAAAACCCTTTACCTGAAATTGATGAAAATGCTTTTGCAGTTGCATTTAGTGATCAGAAAGTATCCTTAGAAAGTACAAACTACACTACGAACTTACAAGTAATTATAGAATCCTCGAATACAGCGTTATTACGAAATAATCTTCCCTCTATTGATAAAATGCATATGTGA
Protein Sequence: MMPLSNIFCQICDASIDHSSCINIFGTTFPRHGELLVNCISKVLRVATNELQGPYICLQCYNLFEMLEQAQKTVSNIHCEISNVYRATERRKCIKQSINNDIKPNQACVTLRKKKLIDDGESLKDASSIETFQAEVTVQQEYTQDNILSHNINVPSIEDAISNEIVLETKEQIKKKETVFNNVENTKSLEYNDTRKNAKENDIMCASVALTNNANAYNINTPPATVHALKMQIGEEKLISLVDSEKNQSKNCIKTDIIFSENRLQVEKINYKWKEIDENMQVMDDSGNTTVANIDKIKVPASPDKIFKQDSKSLKYSCPTCNKRWKTAAELRTHIKTHSTLRPYMCEKCGQAYKHKHALEIHVGMHNGINPFQCNFCQKCFTQKGALMRHLPMHTGETPYQCELCGKRFIHHTSYNMHRLSHSGKKSYKCHMCDLSLLSTSHLKRHMRVHTGEKPYSCTVCGKRFAERYNLLAHQKVHDAFDNKATKAKETQYQCNYCNLLFEQKQTLNEHIKQHADPNNESDLEKSNGMIIQVETEACDLAEKNDSEHSKLQQTWIQMNHPKLDLIDNQARFVLLQNPLPEIDENAFAVAFSDQKVSLESTNYTTNLQVIIESSNTALLRNNLPSIDKMHM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01067149;
90% Identity: iTF_01070595; iTF_01066481; iTF_01069883; iTF_01068510;
80% Identity: -