Basic Information

Gene Symbol
BTBD9
Assembly
GCA_963583965.1
Location
OY757220.1:2072387-2074954[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.5e-26 8.8e-24 84.3 0.0 4 108 32 137 29 139 0.95
2 3 0.036 13 6.5 0.1 81 109 142 170 136 171 0.87
3 3 7.1 2.5e+03 -0.9 0.0 70 93 349 372 345 374 0.90

Sequence Information

Coding Sequence
ATGAGTTCTCACCATGAATTGAACATATCGATTGAGCATCCACTTTCCGGGGACATAAATCATGTTAGCACACTCTCCGATGATATTGGCGCACTCTATCTGTCGGATGATTATTCAGATGTGACTTTAATTGTCGGCGGACAAAGGTTCAATAGCCACAAAATCATATTAGCGGCTCGTAGTCAATATTTCAGAGCGTTACTCTTTGGCGGATTAAAAGAATCGACGCAAcatgaaattgaattaaaagatgCTAATCTAGCCGGATTTAAAGGTTTACTtcaatacatatatacaggACGAATGTCCCTTACAGAGCGACGAGAAGagGTGGTACTGGATATTCTTGGATTAGCACATCTCTATGGATTTTCAGAATTAGAAACATCTATATCGAATTAtcttaaagaaatattaaatataaaaaatgtctGTCTCATATTTGATGCAGCACTTCTTTATCAGCTAGATTTTCTTATCAGGGTTTGCCATGAATACATGGACGAACATGCGTGTGAAGTGATTCAGCACGAGAGCTTTTTGCAATTAAGTGCTGATGCTTTGAATGAACTTGTTTCAAGGGATTCCTTTTATGCGCCAGAGATTGAGATCTTTTTAGCCGTTCGAGAATGGGTAAAAGCAAATCCTGATGTGGATGGAAAAAGTGTTTTAAATAAGGTACGATTAAGCTTGATTTCAATCACGGACCTTTTAAATGTTGTTCGACCAACTGGTTTGGTCCCTCCCGAAGTAATTTTAGACGCAATAGCAACAAGGACACAGATACGTGATTCAGGTCTCAATTATCGTGGTCGGCTACTTATAGATATAAATGTTGCCCATCCTATGCATGGGGCTCAAGTTTTACAGGGTGAAATGCGTAGCTATCTCTTAGACGGCGATACAAATAACTATGATATGGAACGAGGGTATACTAGACATACCATTACTGATTCACGAGAACATGGTATTCTTGTTAAATTAGGTACTCAGTGTATCATTAATCATGTTAAGATGTTGCTTTGGGATAAAGATATACGTTCATATTCTTACTATTTAGAGGTATCTATGGATCAAAAGAATTGGGTCAAAGTTATTGACTATGCAGACTATTTTTGTCGTAGTtggcaatatttatatttcgaaCCGAGAATAGTCCTTTACATTCGTATTGTTGGAACAAATAATACCGTAAACAAAGTTTTCCACCTCGTTAGTTTCGAAGCTTATTATACAAATCATACAGAGAAACTATGCGATGGTTTTGTCGTACCTACGCGAAATGTTGCCACTATGGATCAAAGTGCAACTGTCACTGAAGGTGTTTGTAGATCACGAAATGCTTTATTAAATGGTGATACATCAAATTATGATTGGGATAGTGGATACACGTGTCATCAAGTTGGGTCTGGCTCTATTTTGGTACAACTTGGACAACCGTACATTATAGACTCCATGCGATTATTGCTCTGGGATTGCGATGAACGTTCCTACTCTTATTATGTCGAAGTATCCcgaaattcttggaattggGTTCTGGTGGCTGATAAGACGAGAGAAGCTTGTCGTTCATGGCAAACGATACGCTTTGAACCTCGTCCTATAGTTTTTATACGCATTGTTGGAACACACAATACAGCAAATGAGGTCTTTCACTGTGTTCATTTTGAATGTCCTGCTCAAATAAACGATAAAGTTGTAAGTAAGTCTGCAGTGCACAAAGGGAAGCAATCAAAAGGTCAGGATTCTATGCTTTGGTTAGTACCATTGCCGCCAGAAACAGCTACAGAGGCAGTAAATATTGATCAAGAAGAAACAAATTCTACAGATAGCAATGTTTTATGGGACAACTAA
Protein Sequence
MSSHHELNISIEHPLSGDINHVSTLSDDIGALYLSDDYSDVTLIVGGQRFNSHKIILAARSQYFRALLFGGLKESTQHEIELKDANLAGFKGLLQYIYTGRMSLTERREEVVLDILGLAHLYGFSELETSISNYLKEILNIKNVCLIFDAALLYQLDFLIRVCHEYMDEHACEVIQHESFLQLSADALNELVSRDSFYAPEIEIFLAVREWVKANPDVDGKSVLNKVRLSLISITDLLNVVRPTGLVPPEVILDAIATRTQIRDSGLNYRGRLLIDINVAHPMHGAQVLQGEMRSYLLDGDTNNYDMERGYTRHTITDSREHGILVKLGTQCIINHVKMLLWDKDIRSYSYYLEVSMDQKNWVKVIDYADYFCRSWQYLYFEPRIVLYIRIVGTNNTVNKVFHLVSFEAYYTNHTEKLCDGFVVPTRNVATMDQSATVTEGVCRSRNALLNGDTSNYDWDSGYTCHQVGSGSILVQLGQPYIIDSMRLLLWDCDERSYSYYVEVSRNSWNWVLVADKTREACRSWQTIRFEPRPIVFIRIVGTHNTANEVFHCVHFECPAQINDKVVSKSAVHKGKQSKGQDSMLWLVPLPPETATEAVNIDQEETNSTDSNVLWDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01539698;
90% Identity
iTF_01069057;
80% Identity
iTF_01069751;