Basic Information

Insect: Nomada fabriciana
Gene Symbol: RREB1
Assembly: GCA_907165295.1
Location: OU015689.1:4642521-4660291[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0052 0.5 11.1 0.1 1 23 38 60 38 60 0.96

2 16 0.00022 0.021 15.4 0.0 1 23 74 96 74 96 0.97

3 16 1e-07 9.8e-06 25.9 1.1 1 23 102 125 102 125 0.98

4 16 0.01 1 10.1 0.1 1 23 219 243 219 243 0.95

5 16 0.13 12 6.7 2.9 2 23 249 271 248 271 0.94

6 16 1.5 1.5e+02 3.3 0.6 1 19 327 345 327 347 0.89

7 16 0.16 16 6.3 0.1 1 23 460 482 460 482 0.96

8 16 2.2e-05 0.0022 18.5 0.3 1 23 491 513 491 513 0.98

9 16 0.001 0.097 13.3 2.8 1 23 519 542 519 542 0.97

10 16 0.00037 0.036 14.7 3.0 1 23 896 919 896 919 0.97

11 16 0.00054 0.052 14.2 0.1 3 23 1194 1214 1192 1214 0.97

12 16 0.48 46 4.9 6.0 1 23 1220 1243 1220 1243 0.97

13 16 0.0034 0.32 11.7 2.2 1 23 1279 1303 1279 1303 0.97

14 16 0.38 37 5.2 4.8 1 23 1387 1410 1387 1410 0.96

15 16 0.0091 0.88 10.3 0.4 2 23 1459 1480 1458 1480 0.94

16 16 1.1 1e+02 3.8 8.2 1 23 1486 1508 1486 1508 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0052	0.5	11.1	0.1	1	23	38	60	38	60	0.96
2	16	0.00022	0.021	15.4	0.0	1	23	74	96	74	96	0.97
3	16	1e-07	9.8e-06	25.9	1.1	1	23	102	125	102	125	0.98
4	16	0.01	1	10.1	0.1	1	23	219	243	219	243	0.95
5	16	0.13	12	6.7	2.9	2	23	249	271	248	271	0.94
6	16	1.5	1.5e+02	3.3	0.6	1	19	327	345	327	347	0.89
7	16	0.16	16	6.3	0.1	1	23	460	482	460	482	0.96
8	16	2.2e-05	0.0022	18.5	0.3	1	23	491	513	491	513	0.98
9	16	0.001	0.097	13.3	2.8	1	23	519	542	519	542	0.97
10	16	0.00037	0.036	14.7	3.0	1	23	896	919	896	919	0.97
11	16	0.00054	0.052	14.2	0.1	3	23	1194	1214	1192	1214	0.97
12	16	0.48	46	4.9	6.0	1	23	1220	1243	1220	1243	0.97
13	16	0.0034	0.32	11.7	2.2	1	23	1279	1303	1279	1303	0.97
14	16	0.38	37	5.2	4.8	1	23	1387	1410	1387	1410	0.96
15	16	0.0091	0.88	10.3	0.4	2	23	1459	1480	1458	1480	0.94
16	16	1.1	1e+02	3.8	8.2	1	23	1486	1508	1486	1508	0.98

Sequence Information

Coding Sequence: ATGGATTACCCAAAGAAAGTTACTGTCAAGAACAGCCAAGAGCAGGAGAACGAATCGCAAGCCGATGCTGATTCTTCGCCGTCCAGCATCGAAGTCGTCCCGGAATGTGCACACCCCTGCCCCGCCTGCCCAATCGTCCTAAACAGCTCCAGAGAGTTAACAAACCACCTACGCGGCCATAATTCGCCCCGCAGCACAGATTGCAGCGGCGAGGATGATTACATCTGCGGCGTGTGCAACAAGGTGCTCAGCTCGGCCAGTTCTCTAGACAGGCACGTTTTAGTGCACTCGGGGGAACGTCCATTCAAGTGCAAATACTGCGACATGGCGTTCACCACAAACGGAAACATGAACAGGCACATCAGAACGGCCCACAGAAGCGCGTCGCCGCACAGCTGCACGGATTCCGAAGGGAGCAGCGACTCCGAGAAGCAGTCGCAGGGGCGACACTTAGAGGAGTACAACAACAACGAAATCACGAAGAGGAACTCGCCAGACTTCATCGAGAGGCAAGACGAACACATGCCCAGCCCGTCCGGCAAACGGAAGTGTCCAGATTACTCCAGCGACAACGAGAACCAAAAGAGGCACAAGATCTTGCTGAGCAACTCGAGGACGGAAATGAAATCGCAGCCGGACGACAACCAGGACGTCTATATATGCCCGGTCTGCGGCAGGCAAGACTTTGCCACCAGCGCCCTCCTGGAGGCGCACTTGGAGCGATGCCATCCGGAGTTCCCCACGAAATGCGACTCCTGCAATTTGTCGTTCAAAAATCACAGGGTGCTGAATCTGCATCGATTCATGATACACTTTGCCGAACATTCCATAGGAAGTCCGGCGAGGAACCTTCGCAATTCCATAGTGGGCTTCAACGACCTGACCTTCGTCGACTTCTCCTCGGACAAATTCCCGGCGATCGCCAGAGCGGTCTGCGAGCAATCCCTGCACAGACCTGCGTCTGGAGAGGTCGCGAAGTTTCAATGCTCGAAATGTCTGCGGGCCTTCCCCTGTAGATCGGCGTTGGACGCCCACGAAACGGACTGCGGGATGACGAATTCGCAGAGCAGAATCGCGGACGACAGTCAGTCCAGGAGGGACGACTTTTTCGCCCGGCTGGATCTCCAGAATAAAGCTGCCCTGACGGAAGCCAAAGAGGGGAAAGATTTGGCTGATATACAGAGTATCATATCGGTCACGTCTGGACCTATCCTACAAAGTTTCCCGCGATCCGACTCCAGTACACCCGAGAGCAACAAGTTCAACCCCAGTACCAGTTCCTCCAGCTCCTCGGGCACGTTCTCCACCGAGTACCACGAGGAAGAAGCCCAGGACGCGTTCGCGGCGGAGTTCAGGAAGATGAAGTTGAAAGGCGAGTTCCCTTGCAGACTGTGCTCGGCGATATTCCCCAATCTGAGAGCACTGAAGGGTCACAATAGGGCGCACATGGGCGTAGGACCTGGTATGCCATATCCTTGCAACATGTGCCCGTACACCAGCTCGGACAAGGCCACCCTGGTCAGGCATCTAAGGTCGCACAACGGCGACAGACCTTACGAGTGTTCCCTCTGTAACTACGCGTTCACGACCAAAGCCAACTGCGAGAGACACGTGAGGAACAGGCACGGGAAATTAACGAGGGAGGACATCAAGAGCGTCCTGATCTACCACCCGAACGAGGATTCCACGAACGAAAGCGTGGAGAGGACATCCCCTAGAGTAACGAAGGACGATGTCAGGAAGAGCCTCGTATTCCCGCAAGAACGCGACGATCTTCAGCATCAGGCGCAGATACATTACTCCTCTCCGGCGCACATGGACGGCCGTGGCGAGATCAGGATAATAGACGATGCCAAACTGAACAATTCGGTACTGTCCATGCAGAGCATGAACCATTTCGAGAAGCTCAACGTGTTCTCGATGCCAAGCCAGTCGCTGGAGGTACCGCAACGAAGCGTGGACGAGAGGCCAGACACCAGGTCAGACTGCTCGAAGCCCGACGACGACGCGGAGTCCAGGTCGTCAGAAGCGAGTATATCTCTAGTCAACGATATCAACTCAGATTCGCACCAAAGAATACAAGCTAGTCCGATGAATCTGAAAAAGAGGTCGAGTTTGTCTGACACCGCCGGCGAGGACGGGCCCTTGGATCTGTCCATGGACGTGCTAGATCTCAGCAAGAAGTCCAAGGAAAGGGACGACGACCTTGGCGTGTCTGGATTGCACGAGACCGAGTTCGCAAGGAACCAGGAGCAGCTGTACAACGCGACCAGTCAGCTGTTATTGACGGAGGCGATACTAAAGGCCAGACACGGTATTGGAGCTGGACTTTTGCCACCGTACATGTTCAACCCTCATGTATTCGGCCAGGACTACACTACGAAGGAAAGGTTGCAGAGAGAGTTGGTCAGAGGTCTGCAATTGACCAGCGGAGGGACGTTGGTGGAGCCATCTATTGTCAACACCGGATTCCCAGCTTTCTGTCAAGGCAGAGACTTCAATTCGCAGGCTGTCGGCGAACAGAGCGAATACGCCAAGCTGATCTCCTCAAAAATGGCAAATCAGGGTCACTCGAGTAGAGACAAGCCCGATAATCTGCCGTCTTCGAACTCCGTGAAGATGGTGATTAAAAATGGTGTCCTGATGCCCAAGCAGAAGCAAAGACGATACAGGACCGAGAGACCTTTCACCTGCGAGCATTGCTCTGCAAGGTTCACGCTGAGAAGCAACATGGAAAGGCATATTAAACAGCAGCATCCACAACACTGGAGCCAGCGGCCCAGAGGAGGCCATTCGACTAGAGGTAGACCACCGTCGAGTCATCCGACACTGCTGCAAAACCTTGGACAGTCTACGTCGCAGGTAAACCAGAACTATTCGAGTATCCTGCCGAAGGTCGATCAATCGCCAGCGAGCTCGGACTTGGCCAAGCATCCCATTTCGGACCAAGTCAAATACGCAATTCTGGCTCAACAGTTGAAGGCGAATAAAACGGAAGACAACGATTCAGAGGAAGAACTGGTTATCGACGAGGATCCGCAAGAGAAAGATAACCAGGAATCTCAAGAGCAGGAGAAGAGCCTGCTTAGAGGGCAACTGGAAGGCACTGAACCGGGAAAGGAAGTCACCGTAAAAGAAGAGGTGATGGAACCCATGAACTGTGACTCACAGGAAGATGCTGCTGAACAATCGAACAACGAGGAAGGTGAAGACGAGGGGCCAAAGACTTCTGACACAGAGAAGCCCACAGAAACGGAGAAGTCTGACGCGAGCTCTAATCCAGTTCTGAAGACGGAGGCACTTGATGTGGAAAATGAGAAGGTAGAGGACGGAACGACAGATTTAGCAAGCGTGTCAGAGTTGCTGGACAATGCCTCGCAGCAGTATCAACAATTTCAACCGCAATATCTGAGCGACGAGGAAGGGTTGGTCGCCTCTAACAGCGACTGCAATAATTCTGGCAGCGACGAGAAATCCGATTCGGTGAACTCGTTAAACTCAGTAAACGCCTCGTCGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAGTGCGTATTCGATGGCGCCTAATCGTGTGATCTGTCCGTACTGCGAGCGACCATTCCCCTGGACGTCTTCACTCAGAAGACACATCCTCACCCACACCGGACAGAAACCTTACCAGTGTGTCCACTGTTCGCTGTTATTCACTACCAAATCGAATTGCGACAGACACCTGTTAAGGAAACATAAAGCCAACCCGAACAAGATGCGCAGGGTTAGGAATTCTTCCTCTCCGGATTCTCAAGCAGTCATCAACAACTCATTCTCCATGAGAAATGTTCCCGAGAGGCCGTACAAATGTAACCAGTGCCCGAGTTCGACCTTTTCTACTTTGGGCAATCTCAAAAAGCATCGTTCCACTAAACATGCCAGGAAAGTTACATCGAGGCCGGACAGTCCATGCAGCGAACCTCAGAACAGCCCCCAGGAATGTTCTAAACAGAATAACGAACAGAGCGATTACGACAGCCAATCCTCCAGTGTCTCTGAAGGGACAGAAGTGTCCTCGATGGTAGAAATTGCCAAGACCCCAAATAACACCTCGTCGTCCACCAATGATACACCTAGATCGAGGAGACCATCCCCCAGATCTTCCCCTGGGCCCAGCGACGTGCCTTTCAAGTGTCACCTGTGCGACTGCGGCTTCGCGGACAGACAGGACTGTCTGGAGCACATCAAAGTTAATCACAAGAGATCCTACGAAATGTTAGTTGCAAAGGGAGCCCTAGACATGGACATTGACGCTGTAGAGGACCAGCAACCCCCGCCACAACAGACCAGCGATGGAGAAGAGAAGAGGGGACGGTTTCCGGATTACAGCAACAGAAAGGTGGTCTGCGCATTCTGTATGAGGCGATTCTGGTCCGCGGAGGATCTCCGACGTCACATGAGGACCCATACCGGGGAGAGGCCGTTCTCATGCGACATTTGCTGCCGGAGGTTTACTCTGAAGCACAGTATGCTGCGGCACAGAAAGAAGCACGAGTCGATCGACTCCACGATGTATGTTGGCACCAGTGGGGACGAGGAAAATTCTCCTACACAGCCATCCAGCATCGCTCTACGTAACCAGCAACAACCACCTGTCCATGCGACGAACAACAATGGAAACCCCCGGCTTCAAGACAGAATCTCTTTACCGACCGTCGGTCCGGTCGTAACCAGTGATGCAGTGTCTAGTGGATTAATACGATTTAATCCGTACGAGAAGTTAACCACTTTGTCAGGGAAACTGGCTAGTATTCCACAAAATGTGAATTCAGAAACGAACGAGAGCGCAGATAACGATTTGATTTCTAACCTCCTAGGAATTAGAGATAAGAACTTTATTGACCGCGTACTACAGGCGTCCGCTGATGATGCTGCCAAACTATTGGGGGTGAAGCACAGCCATGAATGA
Protein Sequence: MDYPKKVTVKNSQEQENESQADADSSPSSIEVVPECAHPCPACPIVLNSSRELTNHLRGHNSPRSTDCSGEDDYICGVCNKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHIRTAHRSASPHSCTDSEGSSDSEKQSQGRHLEEYNNNEITKRNSPDFIERQDEHMPSPSGKRKCPDYSSDNENQKRHKILLSNSRTEMKSQPDDNQDVYICPVCGRQDFATSALLEAHLERCHPEFPTKCDSCNLSFKNHRVLNLHRFMIHFAEHSIGSPARNLRNSIVGFNDLTFVDFSSDKFPAIARAVCEQSLHRPASGEVAKFQCSKCLRAFPCRSALDAHETDCGMTNSQSRIADDSQSRRDDFFARLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQSFPRSDSSTPESNKFNPSTSSSSSSGTFSTEYHEEEAQDAFAAEFRKMKLKGEFPCRLCSAIFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSSDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNESVERTSPRVTKDDVRKSLVFPQERDDLQHQAQIHYSSPAHMDGRGEIRIIDDAKLNNSVLSMQSMNHFEKLNVFSMPSQSLEVPQRSVDERPDTRSDCSKPDDDAESRSSEASISLVNDINSDSHQRIQASPMNLKKRSSLSDTAGEDGPLDLSMDVLDLSKKSKERDDDLGVSGLHETEFARNQEQLYNATSQLLLTEAILKARHGIGAGLLPPYMFNPHVFGQDYTTKERLQRELVRGLQLTSGGTLVEPSIVNTGFPAFCQGRDFNSQAVGEQSEYAKLISSKMANQGHSSRDKPDNLPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPSSHPTLLQNLGQSTSQVNQNYSSILPKVDQSPASSDLAKHPISDQVKYAILAQQLKANKTEDNDSEEELVIDEDPQEKDNQESQEQEKSLLRGQLEGTEPGKEVTVKEEVMEPMNCDSQEDAAEQSNNEEGEDEGPKTSDTEKPTETEKSDASSNPVLKTEALDVENEKVEDGTTDLASVSELLDNASQQYQQFQPQYLSDEEGLVASNSDCNNSGSDEKSDSVNSLNSVNASSKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCVHCSLLFTTKSNCDRHLLRKHKANPNKMRRVRNSSSPDSQAVINNSFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHARKVTSRPDSPCSEPQNSPQECSKQNNEQSDYDSQSSSVSEGTEVSSMVEIAKTPNNTSSSTNDTPRSRRPSPRSSPGPSDVPFKCHLCDCGFADRQDCLEHIKVNHKRSYEMLVAKGALDMDIDAVEDQQPPPQQTSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSTMYVGTSGDEENSPTQPSSIALRNQQQPPVHATNNNGNPRLQDRISLPTVGPVVTSDAVSSGLIRFNPYEKLTTLSGKLASIPQNVNSETNESADNDLISNLLGIRDKNFIDRVLQASADDAAKLLGVKHSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00625690;
90% Identity: iTF_01067122;
80% Identity: -