Nfab017272.1
Basic Information
- Insect
- Nomada fabriciana
- Gene Symbol
- bab1
- Assembly
- GCA_907165295.1
- Location
- OU015694.1:2176121-2178738[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.4e-12 7.4e-09 35.3 0.0 2 35 58 92 57 100 0.89
Sequence Information
- Coding Sequence
- ATGTGCGGCGCCAGTGGTGGCGGGAAAAGGGCGAAAGGGGTTCCGAGTTTGATAGAGGATCGGAGGCGCGCCAAGTTGTTGGAGTCATCCCACGCTTGGCTCGGAGCCTCCACATCGAGTATAGCTGCTGACTATTCAACCCTGCTGAAGCTGAAGGCGCCCACGTGGACGCGGCACGATCTCCAGGAAGCGATCGAGGCCGTGGTAACTCAGAAGATGCGATTCACCCAGGCGTCCACCAAATACGGAATACCGAAAGGCACTCTGTACGACAACATCCTGGGTAAAACCAAAAGAATGATGGTCCTGGAGGAAGCGGGTTTGAACTCGTGCGAAGAAACAGCTGTCCTCGAGTTCTGTTGCGACATCACCGTCAGCCCGTACAATCGCCGCACGAAAAAGTCGTTGAACGCGATCCTCAACTTCGTGGAAAAGCTCAGACGGAAGCGCGATCCAAATTTTGTGTTCAACGGTCTATCCGGCTTCCGTTGGTGGTGGGCTTTCTGCAAAAAGCACTCGATAGTCTCCCTTTACTTCAACGACGAGAACGAGAACGACCAGTAG
- Protein Sequence
- MCGASGGGKRAKGVPSLIEDRRRAKLLESSHAWLGASTSSIAADYSTLLKLKAPTWTRHDLQEAIEAVVTQKMRFTQASTKYGIPKGTLYDNILGKTKRMMVLEEAGLNSCEETAVLEFCCDITVSPYNRRTKKSLNAILNFVEKLRRKRDPNFVFNGLSGFRWWWAFCKKHSIVSLYFNDENENDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00219718;
- 90% Identity
- iTF_00961746;
- 80% Identity
- -