Basic Information

Insect: Noctua pronuba
Gene Symbol: -
Assembly: GCA_905220335.1
Location: LR999891.1:2054416-2065220[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0018 0.17 13.1 5.9 1 23 182 204 182 204 0.98

2 11 1.8e-05 0.0016 19.4 1.3 1 23 210 232 210 232 0.98

3 11 6.9e-05 0.0064 17.6 1.7 1 23 238 261 238 261 0.96

4 11 0.033 3 9.2 3.2 1 21 267 287 267 289 0.95

5 11 0.0001 0.0096 17.0 2.7 1 23 295 317 295 317 0.99

6 11 1.4e-05 0.0013 19.8 5.3 1 23 323 345 323 345 0.98

7 11 0.0032 0.29 12.4 0.9 1 23 353 376 353 376 0.97

8 11 0.017 1.6 10.0 4.3 2 23 383 404 382 404 0.96

9 11 4.6e-05 0.0042 18.2 2.9 1 23 410 432 410 432 0.98

10 11 4.3e-06 0.00039 21.4 1.7 1 23 438 461 438 461 0.95

11 11 3e-05 0.0027 18.7 6.0 1 23 475 497 475 497 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0018	0.17	13.1	5.9	1	23	182	204	182	204	0.98
2	11	1.8e-05	0.0016	19.4	1.3	1	23	210	232	210	232	0.98
3	11	6.9e-05	0.0064	17.6	1.7	1	23	238	261	238	261	0.96
4	11	0.033	3	9.2	3.2	1	21	267	287	267	289	0.95
5	11	0.0001	0.0096	17.0	2.7	1	23	295	317	295	317	0.99
6	11	1.4e-05	0.0013	19.8	5.3	1	23	323	345	323	345	0.98
7	11	0.0032	0.29	12.4	0.9	1	23	353	376	353	376	0.97
8	11	0.017	1.6	10.0	4.3	2	23	383	404	382	404	0.96
9	11	4.6e-05	0.0042	18.2	2.9	1	23	410	432	410	432	0.98
10	11	4.3e-06	0.00039	21.4	1.7	1	23	438	461	438	461	0.95
11	11	3e-05	0.0027	18.7	6.0	1	23	475	497	475	497	0.97

Sequence Information

Coding Sequence: ATGCCACCTCCAATTAAAAAGGAGAAAAACAAGCAAGCGCTCATTCAAACATACTTGAACCAAGGAGCAGTCATCACAGATGATAAAAGCTTGCCTACTGGAATGGTCGAGTATTTCGTAGATGAAGATGGCAAGTACTACTATCAGTCATCGGTTGGAGGACAGACCCTAGTCATGAACACTACAGAAGCAAATCAAGAAAATGAGGAGGCTACTGAAGCTCCCGACCCGATTATGACCGACCAAGGAGAAACTTACCAGACGGTCGCCTTCCTTCCCACGGAGAACAATGGGGAAGTGAGCTATGTTCTTGTAGTGCAAGAAGAGAACAAGGGTGGTGTCGTCAACATGGAACTCAAGGTGGACGAGGGACGGGAGAACGTCAAGACCGAGGCTGAGGAGAAAGCCAACGATGACGTGTACAACTTTGACGATGAGGAGGCCGGCGAAGACGAGGAAGAGGAAGAAGGGGACACGGAAATGGCGGACGGCACTAAACCCAAGCCTTCGAATAAGGCGCGCTCCAAGCACGTGCGCCCACATTTCACCTGCAACTTCTGCAATTATACTAGTCATCGCCGATACCTCCTCCTACGACACATGAAGTCCCACTCAGAGGACAGGCCGCACAAGTGCAACGTGTGCGAGCGCGGCTTCAAGACGCTGGCCTCGCTTCAGAACCACGTGAACATGCACAACGGCGTCAAGCCGCATGTCTGCAAGTACTGCAACAGCCCCTTTACTACCTCGGGTGAGCTGGTGCGTCACGTGCGTTACAAGCACACGCACGAGAAGCCGCATAAGTGCTCGGAGTGCGACTACGCGTCCGTGGAGCTGTCCAAGCTGCGCCGCCACGTGCGCTGCCACACCGGCGAGAGGCCCTACCAGTGCCCGCACTGCACGTACGCGTCGCCGGACACGTTCAAGCTGAAGCGCCACCTGCGCACGCACACCGGCGAGAAGCCCTACAAATGCGAGCACTGCAACATGTGCTTCACGCAGTCCAACTCGCTGAAAGCCCACCGGCTCATACACAACGTATCCGAGAAGCCGGTATACTCATGCGAGCTGTGCCCGGCCAAGTGCGGCCGTAAGACGGACCTCCGAATCCACGTGCAGAAGCTGCACACGTCCGACAAGCCGCTGAAGTGCCGCCGCTGTGGCAAGTCCTTCCCCGACCGCTACTCCTGCAAAGTGCACAATAAGACCCACGAGGGCGAGAAATGCTTCAAGTGCGACCTGTGCCCGTATGCTTCGACCACGCAGCGCCACCTCAAGACGCACATGCTCAAGCACACGGACGAGAAGCCCTTCATCTGTGACATGTGCGACCAGTCCTTCAGACAAAAGCAGTTGCTCCGTCGCCACCAGAACCTCTACCACAATCCCAACTACGTGCCGAAGCCGCCTAAGGAGAAGACTCACTCCTGCCACGAGTGCCACCGCATGTTCGCGCACAAGGGCAACCTCATCCGGCACCTGGCCGTGCACGACCCCGAGTCCGGCCATCACGAGCGCGCACTCGCCCTCAAGATTGGACGTCAGAGGAAGGTTCGGTTCGTCGATGGAGAACCTATGAGGGATATCCGTGTCCTGGACCCGTCAGACACTGAGAGCATGATGAAGCTCGGTCTCACCAACAACGGGTTGAAGCATGGGGAGCTCGTGACCGTGGCCGATGATGACGGCCACCAGTATGTGGTGCTCGAGGTCATTCAACTCGAGGATGGCACCGAGCAGCAGGTGGCCGTCGTGGCACCCGAATTCATGGATGAGGATGAGCCTGAAGAGGAAGAGGAAGAGGAGGAAGAGGAAGAAGAAGATGAAGACGAGGAGGAAGAGGAGGGTAAAGACAGGAGCTTTGTTGTGAAGGAAAGCACTGTCACCACCACGAGCATTAAACTTGAGAAGGAGGTCGACACGTGCTTTGGATTTGATGAGGAAGACGAAGAAGAGGAAGAAAACGATGAAATTGATGTCGACGTTAACTATACAGATAAAGTGGTTTTGCATTTAGTCTAG
Protein Sequence: MPPPIKKEKNKQALIQTYLNQGAVITDDKSLPTGMVEYFVDEDGKYYYQSSVGGQTLVMNTTEANQENEEATEAPDPIMTDQGETYQTVAFLPTENNGEVSYVLVVQEENKGGVVNMELKVDEGRENVKTEAEEKANDDVYNFDDEEAGEDEEEEEGDTEMADGTKPKPSNKARSKHVRPHFTCNFCNYTSHRRYLLLRHMKSHSEDRPHKCNVCERGFKTLASLQNHVNMHNGVKPHVCKYCNSPFTTSGELVRHVRYKHTHEKPHKCSECDYASVELSKLRRHVRCHTGERPYQCPHCTYASPDTFKLKRHLRTHTGEKPYKCEHCNMCFTQSNSLKAHRLIHNVSEKPVYSCELCPAKCGRKTDLRIHVQKLHTSDKPLKCRRCGKSFPDRYSCKVHNKTHEGEKCFKCDLCPYASTTQRHLKTHMLKHTDEKPFICDMCDQSFRQKQLLRRHQNLYHNPNYVPKPPKEKTHSCHECHRMFAHKGNLIRHLAVHDPESGHHERALALKIGRQRKVRFVDGEPMRDIRVLDPSDTESMMKLGLTNNGLKHGELVTVADDDGHQYVVLEVIQLEDGTEQQVAVVAPEFMDEDEPEEEEEEEEEEEEDEDEEEEEGKDRSFVVKESTVTTTSIKLEKEVDTCFGFDEEDEEEEENDEIDVDVNYTDKVVLHLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00301464;
90% Identity: iTF_01062117;
80% Identity: -